EnhancerDB
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  3. vista54846[chr7:2221939-2222311]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54846[chr7:2221939-2222311]
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Tissue distribution of vista54846
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Transcription factor that possibly regulate vista54846[chr7:2221939-2222311]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 2221953 2221956 MYB TRANSFAC yes 12521907
chr7 2221953 2221956 MYB TRANSFAC yes 26014121
chr7 2221957 2221972 FOXP1 JASPAR yes 12521908
chr7 2221957 2221972 FOXP1 JASPAR yes 26014122
chr7 2221981 2221997 POU4F3 JASPAR yes 12521909
chr7 2221981 2221997 POU4F3 JASPAR yes 26014123
chr7 2221982 2221996 RXRB JASPAR yes 12521910
chr7 2221982 2221996 RXRB JASPAR yes 26014124
chr7 2221983 2221997 POU4F1 JASPAR yes 12521911
chr7 2221983 2221997 POU4F1 JASPAR yes 26014125
chr7 2221996 2222010 IRF8 JASPAR yes 12521912
chr7 2221996 2222010 IRF8 JASPAR yes 26014126
chr7 2221999 2222009 TFCP2 JASPAR yes 12521913
chr7 2221999 2222009 TFCP2 JASPAR yes 26014127
chr7 2222000 2222013 HSF4 JASPAR yes 12521914
chr7 2222000 2222013 HSF4 JASPAR yes 26014128
chr7 2222019 2222033 E2F7 JASPAR yes 12521915
chr7 2222019 2222033 E2F7 JASPAR yes 26014129
chr7 2222023 2222028 SP1 TRANSFAC yes 12521916
chr7 2222023 2222028 SP1 TRANSFAC yes 26014130
chr7 2222040 2222059 RFX2 JASPAR yes 12521917
chr7 2222040 2222059 RFX2 JASPAR yes 26014131
chr7 2222042 2222057 RFX5 JASPAR yes 12521918
chr7 2222042 2222057 RFX5 JASPAR yes 26014132
chr7 2222044 2222060 RFX2 JASPAR yes 12521919
chr7 2222044 2222060 RFX3 JASPAR yes 12521920
chr7 2222044 2222060 RFX4 JASPAR yes 12521921
chr7 2222044 2222060 RFX5 JASPAR yes 12521922
chr7 2222044 2222060 RFX2 JASPAR yes 26014133
chr7 2222044 2222060 RFX3 JASPAR yes 26014134
chr7 2222044 2222060 RFX4 JASPAR yes 26014135
chr7 2222044 2222060 RFX5 JASPAR yes 26014136
chr7 2222048 2222062 POU1F1 JASPAR yes 12521923
chr7 2222048 2222062 POU1F1 JASPAR yes 26014137
chr7 2222050 2222060 NFATC3 JASPAR yes 12521924
chr7 2222050 2222060 NFATC3 JASPAR yes 26014138
chr7 2222052 2222059 NFATC2 JASPAR yes 12521925
chr7 2222052 2222059 NFATC2 JASPAR yes 26014139
chr7 2222060 2222071 CEBPA JASPAR yes 12521926
chr7 2222060 2222071 CEBPA JASPAR yes 26014140
chr7 2222063 2222069 NFIC JASPAR yes 12521927
chr7 2222063 2222069 NFIC JASPAR yes 26014141
chr7 2222066 2222083 BCL6B JASPAR yes 12521928
chr7 2222066 2222083 BCL6B JASPAR yes 26014142
chr7 2222067 2222085 SRF JASPAR yes 12521929
chr7 2222067 2222085 SRF JASPAR yes 26014143
chr7 2222069 2222084 MEF2C JASPAR yes 12521930
chr7 2222069 2222084 MEF2C JASPAR yes 26014144
chr7 2222070 2222091 IRF1 JASPAR yes 12521931
chr7 2222070 2222091 IRF1 JASPAR yes 26014145
chr7 2222074 2222080 TBP TRANSFAC yes 12521932
chr7 2222074 2222080 TBP TRANSFAC yes 26014146
chr7 2222074 2222089 PRDM1 JASPAR yes 12521933
chr7 2222074 2222089 PRDM1 JASPAR yes 26014147
chr7 2222096 2222099 MYB TRANSFAC yes 12521934
chr7 2222096 2222099 MYB TRANSFAC yes 26014148
chr7 2222104 2222112 FOXO3 JASPAR yes 12521935
chr7 2222104 2222112 FOXO3 JASPAR yes 26014149
chr7 2222104 2222114 NFATC3 JASPAR yes 12521936
chr7 2222104 2222114 NFATC3 JASPAR yes 26014150
chr7 2222113 2222134 IRF1 JASPAR yes 12521937
chr7 2222113 2222134 IRF1 JASPAR yes 26014151
chr7 2222119 2222134 FOXP1 JASPAR yes 12521938
chr7 2222119 2222134 FOXP1 JASPAR yes 26014152
chr7 2222119 2222140 IRF1 JASPAR yes 12521939
chr7 2222119 2222140 IRF1 JASPAR yes 26014153
chr7 2222140 2222152 FOXI1 JASPAR yes 12521940
chr7 2222140 2222152 FOXI1 JASPAR yes 26014154
chr7 2222153 2222166 HSF1 JASPAR yes 12521941
chr7 2222153 2222166 HSF1 JASPAR yes 26014155
chr7 2222171 2222192 IRF1 JASPAR yes 12521942
chr7 2222171 2222192 IRF1 JASPAR yes 26014156
chr7 2222173 2222188 IRF9 JASPAR yes 12521943
chr7 2222173 2222188 IRF9 JASPAR yes 26014157
chr7 2222174 2222188 IRF7 JASPAR yes 12521944
chr7 2222174 2222188 IRF8 JASPAR yes 12521945
chr7 2222174 2222188 IRF7 JASPAR yes 26014158
chr7 2222174 2222188 IRF8 JASPAR yes 26014159
chr7 2222175 2222189 STAT1 JASPAR yes 12521946
chr7 2222175 2222189 STAT1 JASPAR yes 26014160
chr7 2222175 2222190 PRDM1 JASPAR yes 12521947
chr7 2222175 2222190 STAT2 JASPAR yes 12521948
chr7 2222175 2222190 PRDM1 JASPAR yes 26014161
chr7 2222175 2222190 STAT2 JASPAR yes 26014162
chr7 2222176 2222188 IRF1 JASPAR yes 12521949
chr7 2222176 2222188 IRF1 JASPAR yes 26014163
chr7 2222199 2222209 MSC JASPAR yes 12521950
chr7 2222199 2222209 TFAP4 JASPAR yes 12521951
chr7 2222199 2222209 MSC JASPAR yes 26014164
chr7 2222199 2222209 TFAP4 JASPAR yes 26014165
chr7 2222209 2222220 FOSL2 JASPAR yes 12521952
chr7 2222209 2222220 FOSL2 JASPAR yes 26014166
chr7 2222212 2222218 ESR1 TRANSFAC yes 12521953
chr7 2222212 2222218 ESR1 TRANSFAC yes 26014167
chr7 2222214 2222218 ESR1 TRANSFAC yes 12521954
chr7 2222214 2222218 ESR1 TRANSFAC yes 26014168
chr7 2222230 2222245 JUND JASPAR yes 12521955
chr7 2222230 2222245 JUND JASPAR yes 26014169
chr7 2222233 2222245 HLF JASPAR yes 12521956
chr7 2222233 2222245 HLF JASPAR yes 26014170
chr7 2222249 2222263 TLX1 JASPAR yes 12521957
chr7 2222249 2222263 TLX1 JASPAR yes 26014171
chr7 2222251 2222261 MAX JASPAR yes 12521958
chr7 2222251 2222261 MAX JASPAR yes 26014172
chr7 2222251 2222262 USF1 JASPAR yes 12521959
chr7 2222251 2222262 USF2 JASPAR yes 12521960
chr7 2222251 2222262 USF1 JASPAR yes 26014173
chr7 2222251 2222262 USF2 JASPAR yes 26014174
chr7 2222251 2222263 HES5 JASPAR yes 12521961
chr7 2222251 2222263 HES7 JASPAR yes 12521962
chr7 2222251 2222263 HES5 JASPAR yes 26014175
chr7 2222251 2222263 HES7 JASPAR yes 26014176
chr7 2222252 2222262 BHLHE40 JASPAR yes 12521963
chr7 2222252 2222262 CLOCK JASPAR yes 12521964
chr7 2222252 2222262 HEY1 JASPAR yes 12521965
chr7 2222252 2222262 HEY2 JASPAR yes 12521966
chr7 2222252 2222262 MAX JASPAR yes 12521967
chr7 2222252 2222262 MLXIPL JASPAR yes 12521968
chr7 2222252 2222262 MLX JASPAR yes 12521969
chr7 2222252 2222262 MNT JASPAR yes 12521970
chr7 2222252 2222262 TFE3 JASPAR yes 12521971
chr7 2222252 2222262 TFEB JASPAR yes 12521972
chr7 2222252 2222262 BHLHE40 JASPAR yes 26014177
chr7 2222252 2222262 CLOCK JASPAR yes 26014178
chr7 2222252 2222262 HEY1 JASPAR yes 26014179
chr7 2222252 2222262 HEY2 JASPAR yes 26014180
chr7 2222252 2222262 MAX JASPAR yes 26014181
chr7 2222252 2222262 MLXIPL JASPAR yes 26014182
chr7 2222252 2222262 MLX JASPAR yes 26014183
chr7 2222252 2222262 MNT JASPAR yes 26014184
chr7 2222252 2222262 TFE3 JASPAR yes 26014185
chr7 2222252 2222262 TFEB JASPAR yes 26014186
chr7 2222253 2222260 USF1 JASPAR yes 12521973
chr7 2222253 2222260 USF1 JASPAR yes 26014187
chr7 2222254 2222259 MYC TRANSFAC yes 12521974
chr7 2222254 2222259 USF1 TRANSFAC yes 12521975
chr7 2222254 2222259 USF2 TRANSFAC yes 12521976
chr7 2222254 2222259 MYC TRANSFAC yes 26014188
chr7 2222254 2222259 USF1 TRANSFAC yes 26014189
chr7 2222254 2222259 USF2 TRANSFAC yes 26014190
chr7 2222276 2222293 PAX9 JASPAR yes 12521977
chr7 2222276 2222293 PAX9 JASPAR yes 26014191
chr7 2222301 2222306 SP1 TRANSFAC yes 12521978
chr7 2222301 2222306 SP1 TRANSFAC yes 26014192
chr7 2222304 2222315 EBF1 JASPAR yes 12521979
chr7 2222304 2222315 EBF1 JASPAR yes 26014193
SNP sites on vista54846[chr7:2221939-2222311]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 2221949 rs1637755 G A no 9580940
chr7 2221983 rs191413468 G C
POU4F1 POU4F3 RXRB
9580941
chr7 2221985 rs568849527 G T
POU4F1 POU4F3 RXRB
9580942
chr7 2222125 rs574735992 GA G
FOXP1 IRF1
9580943
chr7 2222151 rs571897140 C G
FOXI1
9580944
chr7 2222167 rs534514436 G A no 9580945
Genes possibly regulated by vista54846[chr7:2221939-2222311]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 1855429 2272878 - MAD1L1 ENSG00000002822.11 2272878 0.78 1.0 7169 49433
chr7 2273866 2281840 - FTSJ2 ENSG00000122687.13 2281840 0.86 0.99 7171 40471
chr7 2281857 2290781 + NUDT1 ENSG00000106268.11 2281857 0.89 0.99 7172 40454
Expression level of Genes
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miRNAs possibly regulated by vista54846[chr7:2221939-2222311]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr7 1883825 1883845 - hsa-miR-4655-3p MIMAT0019722 2272546 0.0003667760386205256 0.0 0.0 1409
Expression level of miRNAs
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