EnhancerDB
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  3. vista54847[chr7:2276986-2277172]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54847[chr7:2276986-2277172]
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Tissue distribution of vista54847
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Transcription factor that possibly regulate vista54847[chr7:2276986-2277172]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 2276922 2277189 ELF1 UCSC Txn Factor no Conserved 108543000
chr7 2276934 2277264 BHLHE40 UCSC Txn Factor no Conserved 108543001
chr7 2276962 2277319 RUNX3 UCSC Txn Factor no Conserved 108543002
chr7 2276973 2277297 SPI1 UCSC Txn Factor no Conserved 108543003
chr7 2277013 2277237 IRF4 UCSC Txn Factor no Conserved 108543004
chr7 2277020 2277238 BATF UCSC Txn Factor no Conserved 108543005
chr7 2276993 2276999 ETS1 JASPAR yes 26014194
chr7 2276994 2277004 NFKB1 JASPAR yes 26014195
chr7 2276994 2277005 NFKB1 JASPAR yes 26014196
chr7 2277007 2277018 FOXA1 JASPAR yes 26014197
chr7 2277014 2277024 MSC JASPAR yes 26014198
chr7 2277036 2277047 ELK4 JASPAR yes 26014199
chr7 2277036 2277049 ELF3 JASPAR yes 26014200
chr7 2277037 2277047 ELK1 JASPAR yes 26014201
chr7 2277037 2277047 ELK3 JASPAR yes 26014202
chr7 2277037 2277047 ERG JASPAR yes 26014203
chr7 2277037 2277047 ETS1 JASPAR yes 26014204
chr7 2277037 2277047 ETV3 JASPAR yes 26014205
chr7 2277037 2277047 ETV5 JASPAR yes 26014206
chr7 2277037 2277047 ETV6 JASPAR yes 26014207
chr7 2277037 2277047 FEV JASPAR yes 26014208
chr7 2277037 2277047 FLI1 JASPAR yes 26014209
chr7 2277037 2277047 GABPA JASPAR yes 26014210
chr7 2277037 2277048 ELF5 JASPAR yes 26014211
chr7 2277037 2277048 SPDEF JASPAR yes 26014212
chr7 2277037 2277049 EHF JASPAR yes 26014213
chr7 2277037 2277049 ELF1 JASPAR yes 26014214
chr7 2277037 2277049 ELF4 JASPAR yes 26014215
chr7 2277038 2277046 FEV JASPAR yes 26014216
chr7 2277038 2277047 ELK4 JASPAR yes 26014217
chr7 2277039 2277045 ETS1 JASPAR yes 26014218
chr7 2277039 2277045 SPI1 JASPAR yes 26014219
chr7 2277046 2277066 TP53 JASPAR yes 26014220
chr7 2277048 2277068 TP63 JASPAR yes 26014221
chr7 2277049 2277067 TP53 JASPAR yes 26014222
chr7 2277050 2277065 TP53 JASPAR yes 26014223
chr7 2277073 2277088 PRDM1 JASPAR yes 26014224
chr7 2277078 2277099 ZNF263 JASPAR yes 26014225
chr7 2277079 2277100 ZNF263 JASPAR yes 26014226
chr7 2277086 2277090 NFE TRANSFAC yes 26014227
chr7 2277089 2277100 ELK4 JASPAR yes 26014228
chr7 2277089 2277100 FLI1 JASPAR yes 26014229
chr7 2277089 2277102 ELF3 JASPAR yes 26014230
chr7 2277090 2277100 ETV6 JASPAR yes 26014231
chr7 2277090 2277101 ELF5 JASPAR yes 26014232
chr7 2277090 2277102 EHF JASPAR yes 26014233
chr7 2277090 2277103 ELF1 JASPAR yes 26014234
chr7 2277091 2277098 SPI1 JASPAR yes 26014235
chr7 2277091 2277099 EHF JASPAR yes 26014236
chr7 2277102 2277118 ZNF143 JASPAR yes 26014237
chr7 2277139 2277148 NKX3-2 JASPAR yes 26014238
chr7 2277140 2277148 ISL2 JASPAR yes 26014239
chr7 2277144 2277164 PPARG JASPAR yes 26014240
chr7 2277144 2277165 IRF1 JASPAR yes 26014241
chr7 2277146 2277161 IRF9 JASPAR yes 26014242
chr7 2277148 2277162 STAT1 JASPAR yes 26014243
chr7 2277148 2277163 STAT2 JASPAR yes 26014244
SNP sites on vista54847[chr7:2276986-2277172]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 2277044 rs73291580 C T
BATF BHLHE40 EHF ELF1 ELF3 ELF4 ELF5 ELK1 ELK3 ELK4 ERG ETS1 ETV3 ETV5 ETV6 FEV FLI1 GABPA IRF4 RUNX3 SPDEF SPI1
9581192
chr7 2277069 rs115510148 C T
BATF BHLHE40 ELF1 IRF4 RUNX3 SPI1
9581193
chr7 2277114 rs73043203 G C
BATF BHLHE40 ELF1 IRF4 RUNX3 SPI1 ZNF143
9581194
Genes possibly regulated by vista54847[chr7:2276986-2277172]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 1855429 2272878 - MAD1L1 ENSG00000002822.11 2272878 0.78 1.0 7169 95892
chr7 2273866 2281840 - FTSJ2 ENSG00000122687.13 2281840 0.86 0.99 7171 95332
chr7 2281857 2290781 + NUDT1 ENSG00000106268.11 2281857 0.89 0.99 7172 95315
Expression level of Genes
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miRNAs possibly regulated by vista54847[chr7:2276986-2277172]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr7 1883825 1883845 - hsa-miR-4655-3p MIMAT0019722 2272546 0.004097906744932994 0.0 0.0 1409
Expression level of miRNAs
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