EnhancerDB
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  3. vista54851[chr7:2306623-2306831]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54851[chr7:2306623-2306831]
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Tissue distribution of vista54851
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Transcription factor that possibly regulate vista54851[chr7:2306623-2306831]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 2306454 2306879 TFAP2C UCSC Txn Factor no Conserved 108543007
chr7 2306463 2306874 TFAP2A UCSC Txn Factor no Conserved 108543008
chr7 2306546 2306711 CEBPB UCSC Txn Factor no Conserved 108543009
chr7 2306614 2306625 BATF JASPAR yes 12525006
chr7 2306614 2306625 BATF JASPAR yes 26014378
chr7 2306616 2306627 FOS JASPAR yes 12525007
chr7 2306616 2306627 FOSL1 JASPAR yes 12525008
chr7 2306616 2306627 JUND JASPAR yes 12525009
chr7 2306616 2306627 FOS JASPAR yes 26014379
chr7 2306616 2306627 FOSL1 JASPAR yes 26014380
chr7 2306616 2306627 JUND JASPAR yes 26014381
chr7 2306617 2306628 FOSL2 JASPAR yes 12525010
chr7 2306617 2306628 JUNB JASPAR yes 12525011
chr7 2306617 2306628 FOSL2 JASPAR yes 26014382
chr7 2306617 2306628 JUNB JASPAR yes 26014383
chr7 2306629 2306644 HNF4G JASPAR yes 12525012
chr7 2306629 2306644 NR2C2 JASPAR yes 12525013
chr7 2306629 2306644 HNF4G JASPAR yes 26014384
chr7 2306629 2306644 NR2C2 JASPAR yes 26014385
chr7 2306630 2306644 RXRB JASPAR yes 12525014
chr7 2306630 2306644 RXRG JASPAR yes 12525015
chr7 2306630 2306644 RXRB JASPAR yes 26014386
chr7 2306630 2306644 RXRG JASPAR yes 26014387
chr7 2306630 2306645 HNF4A JASPAR yes 12525016
chr7 2306630 2306645 HNF4A JASPAR yes 26014388
chr7 2306632 2306636 LFA1 TRANSFAC yes 12525017
chr7 2306632 2306636 LFA1 TRANSFAC yes 26014389
chr7 2306639 2306643 LFA1 TRANSFAC yes 12525018
chr7 2306639 2306643 LFA1 TRANSFAC yes 26014390
chr7 2306649 2306662 TFAP2A JASPAR yes 12525019
chr7 2306649 2306662 TFAP2B JASPAR yes 12525020
chr7 2306649 2306662 TFAP2C JASPAR yes 12525021
chr7 2306649 2306662 TFAP2A JASPAR yes 26014391
chr7 2306649 2306662 TFAP2B JASPAR yes 26014392
chr7 2306649 2306662 TFAP2C JASPAR yes 26014393
chr7 2306655 2306670 TFAP2A JASPAR yes 12525022
chr7 2306655 2306670 TFAP2C JASPAR yes 12525023
chr7 2306655 2306670 TFAP2A JASPAR yes 26014394
chr7 2306655 2306670 TFAP2C JASPAR yes 26014395
chr7 2306657 2306672 TFAP2A JASPAR yes 12525024
chr7 2306657 2306672 TFAP2C JASPAR yes 12525025
chr7 2306657 2306672 TFAP2A JASPAR yes 26014396
chr7 2306657 2306672 TFAP2C JASPAR yes 26014397
chr7 2306658 2306670 TFAP2A JASPAR yes 12525026
chr7 2306658 2306670 TFAP2B JASPAR yes 12525027
chr7 2306658 2306670 TFAP2C JASPAR yes 12525028
chr7 2306658 2306670 TFAP2A JASPAR yes 26014398
chr7 2306658 2306670 TFAP2B JASPAR yes 26014399
chr7 2306658 2306670 TFAP2C JASPAR yes 26014400
chr7 2306662 2306671 THAP1 JASPAR yes 12525029
chr7 2306662 2306671 THAP1 JASPAR yes 26014401
chr7 2306662 2306677 HNF4G JASPAR yes 12525030
chr7 2306662 2306677 HNF4G JASPAR yes 26014402
chr7 2306663 2306678 HNF4A JASPAR yes 12525031
chr7 2306663 2306678 HNF4A JASPAR yes 26014403
chr7 2306665 2306669 LFA1 TRANSFAC yes 12525032
chr7 2306665 2306669 LFA1 TRANSFAC yes 26014404
chr7 2306708 2306713 SP1 TRANSFAC yes 12525033
chr7 2306708 2306713 SP1 TRANSFAC yes 26014405
chr7 2306714 2306720 NFIC JASPAR yes 12525034
chr7 2306714 2306720 NFIC JASPAR yes 26014406
chr7 2306721 2306729 MEIS2 JASPAR yes 12525035
chr7 2306721 2306729 MEIS3 JASPAR yes 12525036
chr7 2306721 2306729 MEIS2 JASPAR yes 26014407
chr7 2306721 2306729 MEIS3 JASPAR yes 26014408
chr7 2306755 2306775 ESR1 JASPAR yes 12525037
chr7 2306755 2306775 ESR1 JASPAR yes 26014409
chr7 2306800 2306813 JUN JASPAR yes 12525038
chr7 2306800 2306813 JUN JASPAR yes 26014410
chr7 2306817 2306829 PKNOX1 JASPAR yes 12525039
chr7 2306817 2306829 PKNOX2 JASPAR yes 12525040
chr7 2306817 2306829 TGIF1 JASPAR yes 12525041
chr7 2306817 2306829 TGIF2 JASPAR yes 12525042
chr7 2306817 2306829 PKNOX1 JASPAR yes 26014411
chr7 2306817 2306829 PKNOX2 JASPAR yes 26014412
chr7 2306817 2306829 TGIF1 JASPAR yes 26014413
chr7 2306817 2306829 TGIF2 JASPAR yes 26014414
chr7 2306818 2306828 NEUROG2 JASPAR yes 12525043
chr7 2306818 2306828 NEUROG2 JASPAR yes 26014415
chr7 2306820 2306838 MAFF JASPAR yes 12525044
chr7 2306820 2306838 MAFF JASPAR yes 26014416
chr7 2306821 2306836 MAFK JASPAR yes 12525045
chr7 2306821 2306836 MAFK JASPAR yes 26014417
chr7 2306825 2306836 NRL JASPAR yes 12525046
chr7 2306825 2306836 NRL JASPAR yes 26014418
chr7 2306830 2306839 PITX3 JASPAR yes 12525047
chr7 2306830 2306839 PITX3 JASPAR yes 26014419
chr7 2306830 2306840 GSC2 JASPAR yes 12525048
chr7 2306830 2306840 GSC JASPAR yes 12525049
chr7 2306830 2306840 GSC2 JASPAR yes 26014420
chr7 2306830 2306840 GSC JASPAR yes 26014421
chr7 2306831 2306839 RHOXF1 JASPAR yes 12525050
chr7 2306831 2306839 RHOXF1 JASPAR yes 26014422
SNP sites on vista54851[chr7:2306623-2306831]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 2306646 rs183258708 G A,C
CEBPB TFAP2A TFAP2C
9581386
chr7 2306655 rs4721527 G A
CEBPB TFAP2A TFAP2B TFAP2C
9581387
chr7 2306688 rs572189190 G A
CEBPB TFAP2A TFAP2C
9581388
chr7 2306708 rs6971143 C T
CEBPB SP1 TFAP2A TFAP2C
9581389
chr7 2306741 rs189116234 T C
TFAP2A TFAP2C
9581390
chr7 2306777 rs147045354 T C
TFAP2A TFAP2C
9581391
chr7 2306794 rs62442515 C T
TFAP2A TFAP2C
9581392
chr7 2306813 rs573192892 C T
JUN TFAP2A TFAP2C
9581393
Genes possibly regulated by vista54851[chr7:2306623-2306831]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 1855429 2272878 - MAD1L1 ENSG00000002822.11 2272878 0.78 1.0 7169 66255
chr7 2273866 2281840 - FTSJ2 ENSG00000122687.13 2281840 0.86 0.99 7171 75217
chr7 2281857 2290781 + NUDT1 ENSG00000106268.11 2281857 0.89 0.99 7172 75234
chr7 2291405 2393953 - SNX8 ENSG00000106266.4 2393953 0.88 1.0 7173 12878
chr7 2393721 2420380 + EIF3B ENSG00000106263.13 2393721 0.5 1.0 7174 13110
Expression level of Genes
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miRNAs possibly regulated by vista54851[chr7:2306623-2306831]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr7 2297150 2297170 - hsa-miR-6836-3p MIMAT0027575 2354057 0.0004434964414690292 0.884881 0.0 1411
Expression level of miRNAs
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