EnhancerDB
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  3. vista54852[chr7:2339596-2339897]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54852[chr7:2339596-2339897]
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Tissue distribution of vista54852
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Transcription factor that possibly regulate vista54852[chr7:2339596-2339897]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 2339511 2339752 SPI1 UCSC Txn Factor no Conserved 108543010
chr7 2339593 2339598 ETS2 TRANSFAC yes 12527604
chr7 2339593 2339598 ETS2 TRANSFAC yes 26014423
chr7 2339596 2339614 E2F3 JASPAR yes 12527605
chr7 2339596 2339614 E2F3 JASPAR yes 26014424
chr7 2339605 2339616 FLI1 JASPAR yes 12527606
chr7 2339605 2339616 FLI1 JASPAR yes 26014425
chr7 2339605 2339618 ELF3 JASPAR yes 12527607
chr7 2339605 2339618 ELF3 JASPAR yes 26014426
chr7 2339606 2339617 ELF5 JASPAR yes 12527608
chr7 2339606 2339617 ELF5 JASPAR yes 26014427
chr7 2339606 2339619 ELF1 JASPAR yes 12527609
chr7 2339606 2339619 ELF1 JASPAR yes 26014428
chr7 2339606 2339625 CTCF JASPAR yes 12527610
chr7 2339606 2339625 CTCF JASPAR yes 26014429
chr7 2339607 2339614 SPI1 JASPAR yes 12527611
chr7 2339607 2339614 SPI1 JASPAR yes 26014430
chr7 2339607 2339615 FEV JASPAR yes 12527612
chr7 2339607 2339615 FEV JASPAR yes 26014431
chr7 2339609 2339614 ETS2 TRANSFAC yes 12527613
chr7 2339609 2339614 ETS2 TRANSFAC yes 26014432
chr7 2339623 2339635 TFAP2A JASPAR yes 12527614
chr7 2339623 2339635 TFAP2B JASPAR yes 12527615
chr7 2339623 2339635 TFAP2C JASPAR yes 12527616
chr7 2339623 2339635 TFAP2A JASPAR yes 26014433
chr7 2339623 2339635 TFAP2B JASPAR yes 26014434
chr7 2339623 2339635 TFAP2C JASPAR yes 26014435
chr7 2339642 2339647 ETS2 TRANSFAC yes 12527617
chr7 2339642 2339647 ETS2 TRANSFAC yes 26014436
chr7 2339649 2339657 BARX1 JASPAR yes 12527618
chr7 2339649 2339657 BSX JASPAR yes 12527619
chr7 2339649 2339657 ISL2 JASPAR yes 12527620
chr7 2339649 2339657 LMX1B JASPAR yes 12527621
chr7 2339649 2339657 MSX1 JASPAR yes 12527622
chr7 2339649 2339657 MSX2 JASPAR yes 12527623
chr7 2339649 2339657 BARX1 JASPAR yes 26014437
chr7 2339649 2339657 BSX JASPAR yes 26014438
chr7 2339649 2339657 ISL2 JASPAR yes 26014439
chr7 2339649 2339657 LMX1B JASPAR yes 26014440
chr7 2339649 2339657 MSX1 JASPAR yes 26014441
chr7 2339649 2339657 MSX2 JASPAR yes 26014442
chr7 2339671 2339674 MYB TRANSFAC yes 12527624
chr7 2339671 2339674 MYB TRANSFAC yes 26014443
chr7 2339684 2339695 NRL JASPAR yes 12527625
chr7 2339684 2339695 NRL JASPAR yes 26014444
chr7 2339689 2339707 SRF JASPAR yes 12527626
chr7 2339689 2339707 SRF JASPAR yes 26014445
chr7 2339709 2339721 TGIF1 JASPAR yes 12527627
chr7 2339709 2339721 TGIF2 JASPAR yes 12527628
chr7 2339709 2339721 TGIF1 JASPAR yes 26014446
chr7 2339709 2339721 TGIF2 JASPAR yes 26014447
chr7 2339717 2339730 ELF1 JASPAR yes 12527629
chr7 2339717 2339730 ELF1 JASPAR yes 26014448
chr7 2339720 2339730 GABPA JASPAR yes 12527630
chr7 2339720 2339730 GABPA JASPAR yes 26014449
chr7 2339720 2339731 FLI1 JASPAR yes 12527631
chr7 2339720 2339731 FLI1 JASPAR yes 26014450
chr7 2339733 2339737 YY1 TRANSFAC yes 12527632
chr7 2339733 2339737 YY1 TRANSFAC yes 26014451
chr7 2339736 2339747 BATF JASPAR yes 12527633
chr7 2339736 2339747 BATF JASPAR yes 26014452
chr7 2339748 2339760 TFAP2A JASPAR yes 12527634
chr7 2339748 2339760 TFAP2A JASPAR yes 26014453
chr7 2339778 2339792 RORA JASPAR yes 12527635
chr7 2339778 2339792 RORA JASPAR yes 26014454
chr7 2339786 2339796 NFATC3 JASPAR yes 12527636
chr7 2339786 2339796 NFATC3 JASPAR yes 26014455
chr7 2339787 2339794 NFATC2 JASPAR yes 12527637
chr7 2339787 2339794 NFATC2 JASPAR yes 26014456
chr7 2339846 2339851 NFY TRANSFAC yes 12527638
chr7 2339846 2339851 NFY TRANSFAC yes 26014457
chr7 2339847 2339857 HMBOX1 JASPAR yes 12527639
chr7 2339847 2339857 HMBOX1 JASPAR yes 26014458
chr7 2339851 2339861 HMBOX1 JASPAR yes 12527640
chr7 2339851 2339861 HMBOX1 JASPAR yes 26014459
chr7 2339853 2339856 MYB TRANSFAC yes 12527641
chr7 2339853 2339856 MYB TRANSFAC yes 26014460
chr7 2339853 2339869 ZNF143 JASPAR yes 12527642
chr7 2339853 2339869 ZNF143 JASPAR yes 26014461
chr7 2339855 2339866 SPDEF JASPAR yes 12527643
chr7 2339855 2339866 SPDEF JASPAR yes 26014462
chr7 2339876 2339879 MYB TRANSFAC yes 12527644
chr7 2339876 2339879 MYB TRANSFAC yes 26014463
chr7 2339892 2339907 AR JASPAR yes 12527645
chr7 2339892 2339907 AR JASPAR yes 26014464
SNP sites on vista54852[chr7:2339596-2339897]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 2339608 rs79280008 A C
CTCF E2F3 ELF1 ELF3 ELF5 FEV FLI1 SPI1
9581704
chr7 2339619 rs577689336 C CG
CTCF ELF1 SPI1
9581705
chr7 2339798 rs555300772 A C no 9581706
chr7 2339882 rs141177301 C T no 9581707
Genes possibly regulated by vista54852[chr7:2339596-2339897]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 1855429 2272878 - MAD1L1 ENSG00000002822.11 2272878 0.78 1.0 7169 33282
chr7 2273866 2281840 - FTSJ2 ENSG00000122687.13 2281840 0.86 0.99 7171 42244
chr7 2281857 2290781 + NUDT1 ENSG00000106268.11 2281857 0.89 0.99 7172 42261
chr7 2291405 2393953 - SNX8 ENSG00000106266.4 2393953 0.88 1.0 7173 45944
chr7 2393721 2420380 + EIF3B ENSG00000106263.13 2393721 0.5 1.0 7174 46176
Expression level of Genes
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miRNAs possibly regulated by vista54852[chr7:2339596-2339897]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr7 2297150 2297170 - hsa-miR-6836-3p MIMAT0027575 2354057 0.001465252581635501 0.884881 0.0 1411
Expression level of miRNAs
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