EnhancerDB
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  3. vista54853[chr7:2351826-2352447]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54853[chr7:2351826-2352447]
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Tissue distribution of vista54853
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Transcription factor that possibly regulate vista54853[chr7:2351826-2352447]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 2352168 2352583 RELA UCSC Txn Factor no Conserved 108543011
chr7 2351829 2351835 MAZ TRANSFAC yes 26014465
chr7 2351832 2351838 SP1 TRANSFAC yes 26014466
chr7 2351833 2351838 SP1 TRANSFAC yes 26014467
chr7 2351852 2351871 CTCF JASPAR yes 26014468
chr7 2351861 2351870 ZEB1 JASPAR yes 26014469
chr7 2351880 2351884 NFE TRANSFAC yes 26014470
chr7 2351880 2351885 GATA1 TRANSFAC yes 26014471
chr7 2351880 2351886 GATA3 JASPAR yes 26014472
chr7 2351889 2351900 CEBPB JASPAR yes 26014473
chr7 2351897 2351901 YY1 TRANSFAC yes 26014474
chr7 2351936 2351941 ETS2 TRANSFAC yes 26014475
chr7 2351940 2351946 HiNF-A TRANSFAC yes 26014476
chr7 2351952 2351961 ZEB1 JASPAR yes 26014477
chr7 2351953 2351963 ID4 JASPAR yes 26014478
chr7 2351953 2351963 TCF3 JASPAR yes 26014479
chr7 2351953 2351963 TCF4 JASPAR yes 26014480
chr7 2351954 2351963 SNAI2 JASPAR yes 26014481
chr7 2351955 2351960 USF2 TRANSFAC yes 26014482
chr7 2351968 2351974 SP1 TRANSFAC yes 26014483
chr7 2351978 2351988 NFIA JASPAR yes 26014484
chr7 2351980 2351986 NFIC JASPAR yes 26014485
chr7 2351989 2352000 HOXC13 JASPAR yes 26014486
chr7 2352002 2352008 GATA3 JASPAR yes 26014487
chr7 2352013 2352021 TEAD3 JASPAR yes 26014488
chr7 2352018 2352031 DUXA JASPAR yes 26014489
chr7 2352018 2352034 NFYA JASPAR yes 26014490
chr7 2352019 2352030 DUX4 JASPAR yes 26014491
chr7 2352019 2352037 NFYA JASPAR yes 26014492
chr7 2352023 2352027 H1TF2 TRANSFAC yes 26014493
chr7 2352023 2352027 NFE TRANSFAC yes 26014494
chr7 2352023 2352027 SRF TRANSFAC yes 26014495
chr7 2352036 2352042 PTF TRANSFAC yes 26014496
chr7 2352043 2352054 USF1 JASPAR yes 26014497
chr7 2352045 2352058 NR2F1 JASPAR yes 26014498
chr7 2352050 2352064 GLIS2 JASPAR yes 26014499
chr7 2352057 2352063 ETS1 JASPAR yes 26014500
chr7 2352064 2352068 H4TF2 TRANSFAC yes 26014501
chr7 2352093 2352103 TFEB JASPAR yes 26014502
chr7 2352093 2352104 USF1 JASPAR yes 26014503
chr7 2352093 2352104 USF2 JASPAR yes 26014504
chr7 2352093 2352111 TP63 JASPAR yes 26014505
chr7 2352094 2352104 MAX JASPAR yes 26014506
chr7 2352096 2352110 ATF7 JASPAR yes 26014507
chr7 2352097 2352109 JDP2 JASPAR yes 26014508
chr7 2352106 2352123 NR3C1 JASPAR yes 26014509
chr7 2352106 2352123 NR3C2 JASPAR yes 26014510
chr7 2352108 2352123 AR JASPAR yes 26014511
chr7 2352134 2352138 NFE TRANSFAC yes 26014512
chr7 2352135 2352145 MAX JASPAR yes 26014513
chr7 2352135 2352146 USF1 JASPAR yes 26014514
chr7 2352135 2352146 USF2 JASPAR yes 26014515
chr7 2352135 2352147 HES7 JASPAR yes 26014516
chr7 2352136 2352146 BHLHE40 JASPAR yes 26014517
chr7 2352136 2352146 BHLHE41 JASPAR yes 26014518
chr7 2352136 2352146 MAX JASPAR yes 26014519
chr7 2352136 2352146 MLXIPL JASPAR yes 26014520
chr7 2352136 2352146 MLX JASPAR yes 26014521
chr7 2352136 2352146 MNT JASPAR yes 26014522
chr7 2352136 2352146 SREBF2 JASPAR yes 26014523
chr7 2352136 2352146 TFE3 JASPAR yes 26014524
chr7 2352136 2352146 TFEB JASPAR yes 26014525
chr7 2352136 2352146 TFEC JASPAR yes 26014526
chr7 2352136 2352147 USF2 JASPAR yes 26014527
chr7 2352137 2352147 MAX JASPAR yes 26014528
chr7 2352138 2352143 MYC TRANSFAC yes 26014529
chr7 2352138 2352143 USF1 TRANSFAC yes 26014530
chr7 2352138 2352143 USF2 TRANSFAC yes 26014531
chr7 2352155 2352166 DMRT3 JASPAR yes 26014532
chr7 2352160 2352175 PRDM1 JASPAR yes 26014533
chr7 2352169 2352174 ETS2 TRANSFAC yes 26014534
chr7 2352171 2352186 STAT2 JASPAR yes 26014535
chr7 2352179 2352182 MYB TRANSFAC yes 26014536
chr7 2352209 2352219 SMAD3 JASPAR yes 26014537
chr7 2352236 2352245 HIC2 JASPAR yes 26014538
chr7 2352236 2352248 E2F8 JASPAR yes 26014539
chr7 2352265 2352279 ZIC1 JASPAR yes 26014540
chr7 2352280 2352292 E2F8 JASPAR yes 26014541
chr7 2352299 2352303 NFE TRANSFAC yes 26014542
chr7 2352299 2352312 SMAD2 JASPAR yes 26014543
chr7 2352326 2352337 BATF JASPAR yes 26014544
chr7 2352362 2352368 MZF1 JASPAR yes 26014545
chr7 2352370 2352381 NFKB1 JASPAR yes 26014546
chr7 2352370 2352383 NFKB1 JASPAR yes 26014547
chr7 2352370 2352383 NFKB2 JASPAR yes 26014548
chr7 2352371 2352381 NFKB1 JASPAR yes 26014549
chr7 2352371 2352381 RELA JASPAR yes 26014550
chr7 2352371 2352382 NFKB1 JASPAR yes 26014551
chr7 2352372 2352382 NFKB1 JASPAR yes 26014552
chr7 2352372 2352382 RELA JASPAR yes 26014553
chr7 2352377 2352383 MZF1 JASPAR yes 26014554
chr7 2352380 2352384 H1TF2 TRANSFAC yes 26014555
chr7 2352380 2352384 NFE TRANSFAC yes 26014556
chr7 2352380 2352384 SRF TRANSFAC yes 26014557
chr7 2352389 2352399 ZNF740 JASPAR yes 26014558
chr7 2352390 2352400 SP1 JASPAR yes 26014559
chr7 2352390 2352400 ZNF740 JASPAR yes 26014560
chr7 2352390 2352404 GLIS2 JASPAR yes 26014561
chr7 2352390 2352404 GLIS3 JASPAR yes 26014562
chr7 2352391 2352401 ZNF740 JASPAR yes 26014563
chr7 2352392 2352412 RREB1 JASPAR yes 26014564
chr7 2352403 2352418 IRF9 JASPAR yes 26014565
chr7 2352404 2352418 IRF7 JASPAR yes 26014566
chr7 2352404 2352418 IRF8 JASPAR yes 26014567
chr7 2352405 2352419 STAT1 JASPAR yes 26014568
chr7 2352405 2352420 STAT2 JASPAR yes 26014569
chr7 2352413 2352416 MYB TRANSFAC yes 26014570
chr7 2352415 2352435 RREB1 JASPAR yes 26014571
chr7 2352417 2352425 MGA JASPAR yes 26014572
chr7 2352418 2352438 RREB1 JASPAR yes 26014573
SNP sites on vista54853[chr7:2351826-2352447]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 2351981 rs4442022 T C
NFIA NFIC
9581874
chr7 2352053 rs73675882 C A
GLIS2 NR2F1 USF1
9581875
chr7 2352216 rs533523611 GAC G
RELA SMAD3
9581876
chr7 2352244 rs147551132 C T
E2F8 HIC2 RELA
9581877
chr7 2352362 rs141999928 C A,G
MZF1 RELA
9581878
chr7 2352376 rs114873793 A G,T
NFKB1 NFKB2 RELA
9581879
chr7 2352382 rs145097471 CA C
H1TF2 MZF1 NFE NFKB1 NFKB2 RELA SRF
9581880
chr7 2352390 rs556280463 T TCC
GLIS2 GLIS3 RELA SP1 ZNF740
9581881
chr7 2352398 rs10672731 C CCC,CCG,CG
GLIS2 GLIS3 RELA RREB1 SP1 ZNF740
9581882
chr7 2352398 rs190379854 C G,T
GLIS2 GLIS3 RELA RREB1 SP1 ZNF740
9581883
chr7 2352413 rs548524236 G C
IRF7 IRF8 IRF9 MYB RELA STAT1 STAT2
9581884
Genes possibly regulated by vista54853[chr7:2351826-2352447]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 1855429 2272878 - MAD1L1 ENSG00000002822.11 2272878 0.78 1.0 7169 21052
chr7 2273866 2281840 - FTSJ2 ENSG00000122687.13 2281840 0.86 0.99 7171 30014
chr7 2281857 2290781 + NUDT1 ENSG00000106268.11 2281857 0.89 0.99 7172 30031
chr7 2291405 2393953 - SNX8 ENSG00000106266.4 2393953 0.88 1.0 7173 58494
chr7 2393721 2420380 + EIF3B ENSG00000106263.13 2393721 0.5 1.0 7174 58726
chr7 2443223 2474242 + CHST12 ENSG00000136213.7 2443223 0.68 1.0 7175 9224
Expression level of Genes
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miRNAs possibly regulated by vista54853[chr7:2351826-2352447]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr7 2297150 2297170 - hsa-miR-6836-3p MIMAT0027575 2354057 0.010813594232749742 0.884881 0.0 1411
Expression level of miRNAs
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