EnhancerDB
  1. Home
  2. Enhancers
  3. vista54860[chr7:2538442-2538641]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54860[chr7:2538442-2538641]
Back to top
Tissue distribution of vista54860
Back to top
Transcription factor that possibly regulate vista54860[chr7:2538442-2538641]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 2538450 2538459 THAP1 JASPAR yes 12542224
chr7 2538450 2538459 THAP1 JASPAR yes 26014851
chr7 2538460 2538466 NFE2 TRANSFAC yes 12542225
chr7 2538460 2538466 NFE2 TRANSFAC yes 26014852
chr7 2538485 2538494 THAP1 JASPAR yes 12542226
chr7 2538485 2538494 THAP1 JASPAR yes 26014853
chr7 2538496 2538516 RREB1 JASPAR yes 12542227
chr7 2538496 2538516 RREB1 JASPAR yes 26014854
chr7 2538498 2538518 RREB1 JASPAR yes 12542228
chr7 2538498 2538518 RREB1 JASPAR yes 26014855
chr7 2538503 2538523 RREB1 JASPAR yes 12542229
chr7 2538503 2538523 RREB1 JASPAR yes 26014856
chr7 2538504 2538514 SP1 JASPAR yes 12542230
chr7 2538504 2538514 SP1 JASPAR yes 26014857
chr7 2538504 2538518 PLAG1 JASPAR yes 12542231
chr7 2538504 2538518 PLAG1 JASPAR yes 26014858
chr7 2538512 2538522 ZNF740 JASPAR yes 12542232
chr7 2538512 2538522 ZNF740 JASPAR yes 26014859
chr7 2538513 2538518 TFAP2A TRANSFAC yes 12542233
chr7 2538513 2538518 TFAP2A TRANSFAC yes 26014860
chr7 2538513 2538519 MZF1 JASPAR yes 12542234
chr7 2538513 2538519 MZF1 JASPAR yes 26014861
chr7 2538513 2538523 SP1 JASPAR yes 12542235
chr7 2538513 2538523 SP1 JASPAR yes 26014862
chr7 2538515 2538521 MAZ TRANSFAC yes 12542236
chr7 2538515 2538521 MAZ TRANSFAC yes 26014863
chr7 2538525 2538535 NEUROG2 JASPAR yes 12542237
chr7 2538525 2538535 NEUROG2 JASPAR yes 26014864
chr7 2538529 2538535 YY1 JASPAR yes 12542238
chr7 2538529 2538535 YY1 JASPAR yes 26014865
chr7 2538540 2538555 RFX5 JASPAR yes 12542239
chr7 2538540 2538555 RFX5 JASPAR yes 26014866
chr7 2538545 2538560 SCRT1 JASPAR yes 12542240
chr7 2538545 2538560 SCRT1 JASPAR yes 26014867
chr7 2538552 2538570 ESR1 JASPAR yes 12542241
chr7 2538552 2538570 ESR1 JASPAR yes 26014868
chr7 2538561 2538571 ID4 JASPAR yes 12542242
chr7 2538561 2538571 MSC JASPAR yes 12542243
chr7 2538561 2538571 TCF3 JASPAR yes 12542244
chr7 2538561 2538571 TCF4 JASPAR yes 12542245
chr7 2538561 2538571 ID4 JASPAR yes 26014869
chr7 2538561 2538571 MSC JASPAR yes 26014870
chr7 2538561 2538571 TCF3 JASPAR yes 26014871
chr7 2538561 2538571 TCF4 JASPAR yes 26014872
chr7 2538562 2538571 SNAI2 JASPAR yes 12542246
chr7 2538562 2538571 SNAI2 JASPAR yes 26014873
chr7 2538563 2538568 USF2 TRANSFAC yes 12542247
chr7 2538563 2538568 USF2 TRANSFAC yes 26014874
chr7 2538581 2538591 ZNF740 JASPAR yes 12542248
chr7 2538581 2538591 ZNF740 JASPAR yes 26014875
chr7 2538581 2538602 ZNF263 JASPAR yes 12542249
chr7 2538581 2538602 ZNF263 JASPAR yes 26014876
chr7 2538582 2538597 TFAP2A JASPAR yes 12542250
chr7 2538582 2538597 TFAP2C JASPAR yes 12542251
chr7 2538582 2538597 TFAP2A JASPAR yes 26014877
chr7 2538582 2538597 TFAP2C JASPAR yes 26014878
chr7 2538583 2538596 TFAP2B JASPAR yes 12542252
chr7 2538583 2538596 TFAP2B JASPAR yes 26014879
chr7 2538584 2538596 TFAP2A JASPAR yes 12542253
chr7 2538584 2538596 TFAP2A JASPAR yes 26014880
chr7 2538585 2538596 TFAP2A JASPAR yes 12542254
chr7 2538585 2538596 TFAP2B JASPAR yes 12542255
chr7 2538585 2538596 TFAP2A JASPAR yes 26014881
chr7 2538585 2538596 TFAP2B JASPAR yes 26014882
chr7 2538595 2538601 NFE2 TRANSFAC yes 12542256
chr7 2538595 2538601 NFE2 TRANSFAC yes 26014883
chr7 2538602 2538610 TEAD3 JASPAR yes 12542257
chr7 2538602 2538610 TEAD3 JASPAR yes 26014884
chr7 2538627 2538640 NFKB1 JASPAR yes 12542258
chr7 2538627 2538640 NFKB2 JASPAR yes 12542259
chr7 2538627 2538640 NFKB1 JASPAR yes 26014885
chr7 2538627 2538640 NFKB2 JASPAR yes 26014886
chr7 2538628 2538638 NFKB1 JASPAR yes 12542260
chr7 2538628 2538638 RELA JASPAR yes 12542261
chr7 2538628 2538638 REL JASPAR yes 12542262
chr7 2538628 2538638 NFKB1 JASPAR yes 26014887
chr7 2538628 2538638 RELA JASPAR yes 26014888
chr7 2538628 2538638 REL JASPAR yes 26014889
chr7 2538628 2538639 NFKB1 JASPAR yes 12542263
chr7 2538628 2538639 NFKB1 JASPAR yes 26014890
chr7 2538628 2538646 ESR1 JASPAR yes 12542264
chr7 2538628 2538646 ESR1 JASPAR yes 26014891
chr7 2538629 2538640 NFKB1 JASPAR yes 12542265
chr7 2538629 2538640 NFKB1 JASPAR yes 26014892
chr7 2538635 2538641 MZF1 JASPAR yes 12542266
chr7 2538635 2538641 MZF1 JASPAR yes 26014893
SNP sites on vista54860[chr7:2538442-2538641]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 2538498 rs551929184 C T
RREB1
9583554
chr7 2538521 rs4719543 G A
MAZ RREB1 SP1 ZNF740
9583555
chr7 2538602 rs552953362 C T
TEAD3 ZNF263
9583556
chr7 2538603 rs4721739 G A
TEAD3
9583557
Genes possibly regulated by vista54860[chr7:2538442-2538641]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 2443223 2474242 + CHST12 ENSG00000136213.7 2443223 0.68 1.0 7175 4781
chr7 2552163 2568811 + LFNG ENSG00000106003.8 2552163 0.86 0.99 7176 86478
chr7 2577511 2595361 - BRAT1 ENSG00000106009.11 2595361 0.61 1.0 7177 43280
chr7 2598632 2654368 + IQCE ENSG00000106012.13 2598632 0.73 1.0 7178 40009
Expression level of Genes
Back to top
miRNAs possibly regulated by vista54860[chr7:2538442-2538641]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results