EnhancerDB
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  3. vista54862[chr7:2548551-2548955]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54862[chr7:2548551-2548955]
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Tissue distribution of vista54862
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Transcription factor that possibly regulate vista54862[chr7:2548551-2548955]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 2548579 2548599 ESR1 JASPAR yes 26014931
chr7 2548592 2548596 NFE TRANSFAC yes 26014932
chr7 2548595 2548601 MZF1 JASPAR yes 26014933
chr7 2548614 2548619 NFY TRANSFAC yes 26014934
chr7 2548616 2548631 RUNX2 JASPAR yes 26014935
chr7 2548620 2548630 RUNX3 JASPAR yes 26014936
chr7 2548621 2548630 RUNX2 JASPAR yes 26014937
chr7 2548630 2548642 PKNOX1 JASPAR yes 26014938
chr7 2548630 2548642 PKNOX2 JASPAR yes 26014939
chr7 2548630 2548642 TGIF1 JASPAR yes 26014940
chr7 2548630 2548642 TGIF2 JASPAR yes 26014941
chr7 2548634 2548647 SMAD2 JASPAR yes 26014942
chr7 2548676 2548690 PLAG1 JASPAR yes 26014943
chr7 2548677 2548682 SP1 TRANSFAC yes 26014944
chr7 2548687 2548708 ZNF263 JASPAR yes 26014945
chr7 2548692 2548704 NHLH1 JASPAR yes 26014946
chr7 2548735 2548743 TBX15 JASPAR yes 26014947
chr7 2548735 2548746 E2F6 JASPAR yes 26014948
chr7 2548736 2548741 SP1 TRANSFAC yes 26014949
chr7 2548737 2548747 SP1 JASPAR yes 26014950
chr7 2548737 2548747 ZNF740 JASPAR yes 26014951
chr7 2548739 2548745 MAZ TRANSFAC yes 26014952
chr7 2548743 2548748 SP1 TRANSFAC yes 26014953
chr7 2548743 2548750 SP1 TRANSFAC yes 26014954
chr7 2548743 2548753 SP1 JASPAR yes 26014955
chr7 2548749 2548759 SP1 JASPAR yes 26014956
chr7 2548750 2548754 LFA1 TRANSFAC yes 26014957
chr7 2548793 2548806 SMAD2 JASPAR yes 26014958
chr7 2548839 2548850 TBX20 JASPAR yes 26014959
chr7 2548860 2548875 STAT1 JASPAR yes 26014960
chr7 2548862 2548873 STAT3 JASPAR yes 26014961
chr7 2548891 2548904 ZBTB18 JASPAR yes 26014962
chr7 2548901 2548911 SP1 JASPAR yes 26014963
chr7 2548902 2548907 SP1 TRANSFAC yes 26014964
chr7 2548903 2548908 SP1 TRANSFAC yes 26014965
chr7 2548903 2548909 SP1 TRANSFAC yes 26014966
chr7 2548908 2548912 H4TF2 TRANSFAC yes 26014967
chr7 2548918 2548924 MZF1 JASPAR yes 26014968
chr7 2548933 2548948 RUNX2 JASPAR yes 26014969
SNP sites on vista54862[chr7:2548551-2548955]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 2548573 rs551299541 T C no 9583683
chr7 2548730 rs566859403 C G no 9583684
chr7 2548779 rs55996524 C T no 9583685
chr7 2548782 rs549592861 G A no 9583686
chr7 2548794 rs371101472 C G
SMAD2
9583687
chr7 2548804 rs11761221 G A,T
SMAD2
9583688
chr7 2548839 rs138204197 C T
TBX20
9583689
chr7 2548888 rs149595420 A G no 9583690
chr7 2548891 rs114295221 G A
ZBTB18
9583691
chr7 2548932 rs2969027 G C no 9583692
Genes possibly regulated by vista54862[chr7:2548551-2548955]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 2552163 2568811 + LFNG ENSG00000106003.8 2552163 0.86 0.99 7176 96792
chr7 2577511 2595361 - BRAT1 ENSG00000106009.11 2595361 0.61 1.0 7177 53594
chr7 2598632 2654368 + IQCE ENSG00000106012.13 2598632 0.73 1.0 7178 50323
Expression level of Genes
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miRNAs possibly regulated by vista54862[chr7:2548551-2548955]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results