EnhancerDB
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  3. vista54874[chr7:2662902-2663119]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54874[chr7:2662902-2663119]
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Tissue distribution of vista54874
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Transcription factor that possibly regulate vista54874[chr7:2662902-2663119]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 2662844 2663115 HNF4G UCSC Txn Factor no Conserved 108543023
chr7 2662844 2663140 HNF4A UCSC Txn Factor no Conserved 108543024
chr7 2662887 2663127 SP1 UCSC Txn Factor no Conserved 108543025
chr7 2662897 2662914 RXRA JASPAR yes 12547963
chr7 2662897 2662914 RXRA JASPAR yes 26015617
chr7 2662901 2662907 NFE2 TRANSFAC yes 12547964
chr7 2662901 2662907 NFE2 TRANSFAC yes 26015618
chr7 2662902 2662917 NR2C2 JASPAR yes 12547965
chr7 2662902 2662917 NR2C2 JASPAR yes 26015619
chr7 2662906 2662916 SP1 JASPAR yes 12547966
chr7 2662906 2662916 SP1 JASPAR yes 26015620
chr7 2662947 2662962 HNF4A JASPAR yes 12547967
chr7 2662947 2662962 HNF4A JASPAR yes 26015621
chr7 2662948 2662963 HNF4G JASPAR yes 12547968
chr7 2662948 2662963 HNF4G JASPAR yes 26015622
chr7 2662950 2662971 REST JASPAR yes 12547969
chr7 2662950 2662971 REST JASPAR yes 26015623
chr7 2662951 2662970 REST JASPAR yes 12547970
chr7 2662951 2662970 REST JASPAR yes 26015624
chr7 2662954 2662969 HNF4A JASPAR yes 12547971
chr7 2662954 2662969 HNF4A JASPAR yes 26015625
chr7 2662962 2662966 H4TF2 TRANSFAC yes 12547972
chr7 2662962 2662966 H4TF2 TRANSFAC yes 26015626
chr7 2662962 2662977 TFAP2A JASPAR yes 12547973
chr7 2662962 2662977 TFAP2A JASPAR yes 26015627
chr7 2662968 2662982 PLAG1 JASPAR yes 12547974
chr7 2662968 2662982 PLAG1 JASPAR yes 26015628
chr7 2662985 2662991 MAZ TRANSFAC yes 12547975
chr7 2662985 2662991 MAZ TRANSFAC yes 26015629
chr7 2662994 2663008 TLX1 JASPAR yes 12547976
chr7 2662994 2663008 TLX1 JASPAR yes 26015630
chr7 2663002 2663006 LFA1 TRANSFAC yes 12547977
chr7 2663002 2663006 LFA1 TRANSFAC yes 26015631
chr7 2663002 2663016 TLX1 JASPAR yes 12547978
chr7 2663002 2663016 TLX1 JASPAR yes 26015632
chr7 2663017 2663022 ETS2 TRANSFAC yes 12547979
chr7 2663017 2663022 ETS2 TRANSFAC yes 26015633
chr7 2663021 2663028 MEIS1 JASPAR yes 12547980
chr7 2663021 2663028 MEIS1 JASPAR yes 26015634
chr7 2663021 2663029 MEIS2 JASPAR yes 12547981
chr7 2663021 2663029 MEIS2 JASPAR yes 26015635
chr7 2663038 2663043 SP1 TRANSFAC yes 12547982
chr7 2663038 2663043 SP1 TRANSFAC yes 26015636
chr7 2663054 2663075 REST JASPAR yes 12547983
chr7 2663054 2663075 REST JASPAR yes 26015637
chr7 2663055 2663070 HNF4G JASPAR yes 12547984
chr7 2663055 2663070 NR2C2 JASPAR yes 12547985
chr7 2663055 2663070 HNF4G JASPAR yes 26015638
chr7 2663055 2663070 NR2C2 JASPAR yes 26015639
chr7 2663056 2663070 RXRG JASPAR yes 12547986
chr7 2663056 2663070 RXRG JASPAR yes 26015640
chr7 2663056 2663071 HNF4A JASPAR yes 12547987
chr7 2663056 2663071 HNF4A JASPAR yes 26015641
chr7 2663060 2663066 SOX10 JASPAR yes 12547988
chr7 2663060 2663066 SOX10 JASPAR yes 26015642
chr7 2663065 2663069 LFA1 TRANSFAC yes 12547989
chr7 2663065 2663069 LFA1 TRANSFAC yes 26015643
chr7 2663065 2663085 ESR1 JASPAR yes 12547990
chr7 2663065 2663085 ESR1 JASPAR yes 26015644
chr7 2663068 2663086 ESR2 JASPAR yes 12547991
chr7 2663068 2663086 ESR2 JASPAR yes 26015645
chr7 2663070 2663085 ESR2 JASPAR yes 12547992
chr7 2663070 2663085 ESR2 JASPAR yes 26015646
chr7 2663070 2663090 ESR1 JASPAR yes 12547993
chr7 2663070 2663090 ESR1 JASPAR yes 26015647
chr7 2663078 2663084 NFE2 TRANSFAC yes 12547994
chr7 2663078 2663084 NFE2 TRANSFAC yes 26015648
chr7 2663109 2663120 FLI1 JASPAR yes 12547995
chr7 2663109 2663120 FLI1 JASPAR yes 26015649
chr7 2663110 2663120 GABPA JASPAR yes 12547996
chr7 2663110 2663120 GABPA JASPAR yes 26015650
chr7 2663110 2663121 ELF5 JASPAR yes 12547997
chr7 2663110 2663121 ELF5 JASPAR yes 26015651
chr7 2663110 2663123 ELF1 JASPAR yes 12547998
chr7 2663110 2663123 ELF1 JASPAR yes 26015652
chr7 2663111 2663118 SPI1 JASPAR yes 12547999
chr7 2663111 2663118 SPI1 JASPAR yes 26015653
chr7 2663111 2663119 FEV JASPAR yes 12548000
chr7 2663111 2663119 FEV JASPAR yes 26015654
chr7 2663113 2663118 ETS2 TRANSFAC yes 12548001
chr7 2663113 2663118 ETS2 TRANSFAC yes 26015655
chr7 2663118 2663124 ETS1 JASPAR yes 12548002
chr7 2663118 2663124 ETS1 JASPAR yes 26015656
SNP sites on vista54874[chr7:2662902-2663119]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 2662910 rs115178445 C A
HNF4A HNF4G NR2C2 RXRA SP1
9584338
chr7 2662913 rs548889900 C A,G
HNF4A HNF4G NR2C2 RXRA SP1
9584339
chr7 2663043 rs57680893 G A
HNF4A HNF4G SP1
9584340
chr7 2663076 rs1880783 T C
ESR1 ESR2 HNF4A HNF4G SP1
9584341
chr7 2663085 rs374632030 C G,T
ESR1 ESR2 HNF4A HNF4G SP1
9584342
chr7 2663092 rs940988 C T
HNF4A HNF4G SP1
9584343
chr7 2663094 rs374638666 G C
HNF4A HNF4G SP1
9584344
Genes possibly regulated by vista54874[chr7:2662902-2663119]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 2577511 2595361 - BRAT1 ENSG00000106009.11 2595361 0.61 1.0 7177 32459
chr7 2598632 2654368 + IQCE ENSG00000106012.13 2598632 0.73 1.0 7178 35730
chr7 2671585 2704436 + TTYH3 ENSG00000136295.10 2671585 0.88 1.0 7179 91534
chr7 2719156 2815134 + AMZ1 ENSG00000174945.9 2719156 0.82 0.95 7180 43963
Expression level of Genes
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miRNAs possibly regulated by vista54874[chr7:2662902-2663119]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results