EnhancerDB

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chrom.	Start	End	TF Name	Source	Predicted site?	Tissue/Cell line	id
chr7	2738463	2738927	NFIC	UCSC Txn Factor	no	Conserved	108543041
chr7	2738471	2738978	RUNX3	UCSC Txn Factor	no	Conserved	108543042
chr7	2738490	2738898	FOXM1	UCSC Txn Factor	no	Conserved	108543043
chr7	2738526	2738896	EP300	UCSC Txn Factor	no	Conserved	108543044
chr7	2738534	2738864	BHLHE40	UCSC Txn Factor	no	Conserved	108543045
chr7	2738549	2738803	TCF12	UCSC Txn Factor	no	Conserved	108543046
chr7	2738552	2738767	BATF	UCSC Txn Factor	no	Conserved	108543047
chr7	2738541	2738547	ETS1	JASPAR	yes		26016273
chr7	2738541	2738551	ELK1	JASPAR	yes		26016274
chr7	2738583	2738593	NKX2-3	JASPAR	yes		26016275
chr7	2738618	2738628	GABPA	JASPAR	yes		26016276
chr7	2738618	2738629	FLI1	JASPAR	yes		26016277
chr7	2738640	2738651	FOS	JASPAR	yes		26016278
chr7	2738640	2738651	JUND	JASPAR	yes		26016279
chr7	2738656	2738669	EOMES	JASPAR	yes		26016280
chr7	2738658	2738668	TBR1	JASPAR	yes		26016281
chr7	2738658	2738669	TBX20	JASPAR	yes		26016282
chr7	2738658	2738669	TBX2	JASPAR	yes		26016283
chr7	2738659	2738669	TBX21	JASPAR	yes		26016284
chr7	2738660	2738668	MGA	JASPAR	yes		26016285
chr7	2738660	2738668	TBX1	JASPAR	yes		26016286
chr7	2738675	2738685	ID4	JASPAR	yes		26016287
chr7	2738675	2738685	TCF3	JASPAR	yes		26016288
chr7	2738675	2738685	TCF4	JASPAR	yes		26016289
chr7	2738676	2738685	SNAI2	JASPAR	yes		26016290
chr7	2738677	2738682	USF2	TRANSFAC	yes		26016291
chr7	2738694	2738698	YY1	TRANSFAC	yes		26016292
chr7	2738707	2738722	RUNX2	JASPAR	yes		26016293
chr7	2738710	2738721	RUNX1	JASPAR	yes		26016294
chr7	2738711	2738721	RUNX3	JASPAR	yes		26016295
chr7	2738712	2738721	RUNX2	JASPAR	yes		26016296
chr7	2738715	2738729	STAT1	JASPAR	yes		26016297
chr7	2738716	2738731	IRF9	JASPAR	yes		26016298
chr7	2738736	2738756	RREB1	JASPAR	yes		26016299
chr7	2738739	2738754	RUNX2	JASPAR	yes		26016300
chr7	2738740	2738746	MZF1	JASPAR	yes		26016301
chr7	2738741	2738755	PLAG1	JASPAR	yes		26016302
chr7	2738741	2738761	RREB1	JASPAR	yes		26016303
chr7	2738755	2738761	TCF4	TRANSFAC	yes		26016304
chr7	2738756	2738771	LEF1	JASPAR	yes		26016305
chr7	2738757	2738771	GATA2	JASPAR	yes		26016306
chr7	2738757	2738771	TCF7L2	JASPAR	yes		26016307
chr7	2738761	2738769	GATA3	JASPAR	yes		26016308
chr7	2738775	2738788	NFKB1	JASPAR	yes		26016309
chr7	2738789	2738799	SP1	JASPAR	yes		26016310
chr7	2738806	2738811	SP1	TRANSFAC	yes		26016311
chr7	2738812	2738824	PKNOX1	JASPAR	yes		26016312
chr7	2738812	2738824	PKNOX2	JASPAR	yes		26016313
chr7	2738812	2738824	TGIF1	JASPAR	yes		26016314
chr7	2738812	2738824	TGIF2	JASPAR	yes		26016315
chr7	2738892	2738906	GLIS2	JASPAR	yes		26016316
chr7	2738892	2738906	GLIS3	JASPAR	yes		26016317
chr7	2738925	2738929	ESR1	TRANSFAC	yes		26016318
chr7	2738931	2738941	NEUROG2	JASPAR	yes		26016319
chr7	2738931	2738943	TAL1	JASPAR	yes		26016320
chr7	2738945	2738951	SP1	TRANSFAC	yes		26016321
chr7	2738946	2738951	SP1	TRANSFAC	yes		26016322
chr7	2738950	2738961	NFE2L2	JASPAR	yes		26016323
chr7	2738952	2738958	SOX10	JASPAR	yes		26016324
chr7	2738973	2738994	ZNF263	JASPAR	yes		26016325
chr7	2738976	2738997	ZNF263	JASPAR	yes		26016326
chr7	2738977	2738987	ZNF740	JASPAR	yes		26016327
chr7	2738977	2738991	GLIS2	JASPAR	yes		26016328
chr7	2738977	2738991	GLIS3	JASPAR	yes		26016329
chr7	2738977	2738991	ZIC1	JASPAR	yes		26016330
chr7	2738977	2738992	ZIC3	JASPAR	yes		26016331
chr7	2738977	2738992	ZIC4	JASPAR	yes		26016332
chr7	2738979	2739000	ZNF263	JASPAR	yes		26016333
chr7	2738984	2738989	MYC	TRANSFAC	yes		26016334
chr7	2739002	2739023	REST	JASPAR	yes		26016335
chr7	2739003	2739007	H4TF2	TRANSFAC	yes		26016336
chr7	2739003	2739022	REST	JASPAR	yes		26016337
chr7	2739014	2739025	CEBPA	JASPAR	yes		26016338
chr7	2739015	2739026	CEBPB	JASPAR	yes		26016339

chrom	Position	dbSNP ID	Reference Allele	Alternative Allele	is SNP in TFBS	id
chr7	2738546	rs144727417	C	G,T	BHLHE40 ELK1 EP300 ETS1 FOXM1 NFIC RUNX3	9584879
chr7	2738555	rs147869668	C	T	BATF BHLHE40 EP300 FOXM1 NFIC RUNX3 TCF12	9584880
chr7	2738559	rs4719633	C	T	BATF BHLHE40 EP300 FOXM1 NFIC RUNX3 TCF12	9584881
chr7	2738680	rs190651715	C	T	BATF BHLHE40 EP300 FOXM1 ID4 NFIC RUNX3 SNAI2 TCF12 TCF3 TCF4 USF2	9584882
chr7	2738755	rs553663014	C	A,T	BATF BHLHE40 EP300 FOXM1 NFIC PLAG1 RREB1 RUNX3 TCF12 TCF4	9584883
chr7	2738786	rs141563779	C	G	BHLHE40 EP300 FOXM1 NFIC NFKB1 RUNX3 TCF12	9584884
chr7	2738848	rs74384804	T	C	BHLHE40 EP300 FOXM1 NFIC RUNX3	9584885
chr7	2738876	rs77129018	G	A	EP300 FOXM1 NFIC RUNX3	9584886
chr7	2738885	rs59783571	G	A	EP300 FOXM1 NFIC RUNX3	9584887
chr7	2738886	rs147108010	C	A,T	EP300 FOXM1 NFIC RUNX3	9584888
chr7	2738903	rs547102923	G	A	GLIS2 GLIS3 NFIC RUNX3	9584889
chr7	2738925	rs141037215	C	G,T	ESR1 NFIC RUNX3	9584890
chr7	2738984	rs150234099	C	G	GLIS2 GLIS3 MYC ZIC1 ZIC3 ZIC4 ZNF263 ZNF740	9584891
chr7	2738989	rs551081593	G	A	GLIS2 GLIS3 MYC ZIC1 ZIC3 ZIC4 ZNF263	9584892
chr7	2739017	rs809547	T	C	CEBPA CEBPB REST	9584893
chr7	2739027	rs113362572	C	A,T	no	9584894
chr7	2739029	rs78721875	C	A	no	9584895

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	Gene Name	Ensembl ID	TSS	TSI of Normal tissues	TSI of Cancer tissues	Distance between enhancer and TSS	id	More
chr7	2671585	2704436	+	TTYH3	ENSG00000136295.10	2671585	0.88	1.0	7179	33048
chr7	2719156	2815134	+	AMZ1	ENSG00000174945.9	2719156	0.82	0.95	7180	80619

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	miRNA Name	miRBase ID	TSS	Score	TSI of Normal tissues	TSI of Cancer tissues	id	More

No results

EnhancerDB

View enhancers around input chromosomal region

Chromosome characteristics of vista54886[chr7:2738537-2739051]

Tissue distribution of vista54886

Transcription factor that possibly regulate vista54886[chr7:2738537-2739051]

SNP sites on vista54886[chr7:2738537-2739051]

Genes possibly regulated by vista54886[chr7:2738537-2739051]

Details of Genes

Expression level of Genes

miRNAs possibly regulated by vista54886[chr7:2738537-2739051]

Details of miRNAs

Expression level of miRNAs