EnhancerDB
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  3. vista54888[chr7:2749963-2750288]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54888[chr7:2749963-2750288]
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Tissue distribution of vista54888
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Transcription factor that possibly regulate vista54888[chr7:2749963-2750288]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 2749332 2750024 CTCF UCSC Txn Factor no Conserved 108543048
chr7 2749895 2750309 RELA UCSC Txn Factor no Conserved 108543049
chr7 2749963 2750273 RUNX3 UCSC Txn Factor no Conserved 108543050
chr7 2749998 2750004 TCF4 TRANSFAC yes 26016372
chr7 2750004 2750013 SNAI2 JASPAR yes 26016373
chr7 2750004 2750014 FIGLA JASPAR yes 26016374
chr7 2750004 2750014 TCF3 JASPAR yes 26016375
chr7 2750045 2750057 GRHL1 JASPAR yes 26016376
chr7 2750054 2750058 TEAD2 TRANSFAC yes 26016377
chr7 2750104 2750115 NFKB1 JASPAR yes 26016378
chr7 2750105 2750115 NFKB1 JASPAR yes 26016379
chr7 2750105 2750115 RELA JASPAR yes 26016380
chr7 2750105 2750115 REL JASPAR yes 26016381
chr7 2750122 2750133 E2F4 JASPAR yes 26016382
chr7 2750122 2750133 E2F6 JASPAR yes 26016383
chr7 2750123 2750134 E2F1 JASPAR yes 26016384
chr7 2750125 2750139 ZIC1 JASPAR yes 26016385
chr7 2750125 2750140 ZIC4 JASPAR yes 26016386
chr7 2750127 2750132 SP1 TRANSFAC yes 26016387
chr7 2750143 2750153 ZNF740 JASPAR yes 26016388
chr7 2750169 2750173 NFE TRANSFAC yes 26016389
chr7 2750204 2750212 EHF JASPAR yes 26016390
chr7 2750206 2750211 ETS2 TRANSFAC yes 26016391
chr7 2750232 2750237 GATA1 TRANSFAC yes 26016392
chr7 2750243 2750247 H4TF2 TRANSFAC yes 26016393
chr7 2750244 2750264 ESR1 JASPAR yes 26016394
chr7 2750246 2750266 PPARG JASPAR yes 26016395
chr7 2750247 2750267 PPARG JASPAR yes 26016396
chr7 2750249 2750264 ESR2 JASPAR yes 26016397
chr7 2750264 2750278 CREB3L1 JASPAR yes 26016398
chr7 2750275 2750279 YY1 TRANSFAC yes 26016399
SNP sites on vista54888[chr7:2749963-2750288]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 2750028 rs10229817 C A,T
RELA RUNX3
9584940
chr7 2750044 rs575644838 C T
RELA RUNX3
9584941
chr7 2750047 rs10229834 C A
GRHL1 RELA RUNX3
9584942
chr7 2750066 rs7799678 C T
RELA RUNX3
9584943
chr7 2750071 rs145680940 C T
RELA RUNX3
9584944
chr7 2750083 rs60925902 A T
RELA RUNX3
9584945
chr7 2750100 rs7799692 C T
RELA RUNX3
9584946
chr7 2750129 rs10229934 C T
E2F1 E2F4 E2F6 RELA RUNX3 SP1 ZIC1 ZIC4
9584947
chr7 2750134 rs117805952 G A
E2F1 RELA RUNX3 ZIC1 ZIC4
9584948
chr7 2750152 rs77726604 G A
RELA RUNX3 ZNF740
9584949
chr7 2750160 rs138371461 C T
RELA RUNX3
9584950
chr7 2750161 rs142756845 G A
RELA RUNX3
9584951
chr7 2750193 rs7786163 T C
RELA RUNX3
9584952
chr7 2750234 rs4721980 T C
GATA1 RELA RUNX3
9584953
chr7 2750241 rs190422192 C T
RELA RUNX3
9584954
chr7 2750245 rs7798875 G C
ESR1 H4TF2 RELA RUNX3
9584955
Genes possibly regulated by vista54888[chr7:2749963-2750288]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 2671585 2704436 + TTYH3 ENSG00000136295.10 2671585 0.88 1.0 7179 21622
chr7 2719156 2815134 + AMZ1 ENSG00000174945.9 2719156 0.82 0.95 7180 69193
Expression level of Genes
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miRNAs possibly regulated by vista54888[chr7:2749963-2750288]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results