EnhancerDB
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  3. vista5489[chr1:230240540-230240902]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5489[chr1:230240540-230240902]
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Tissue distribution of vista5489
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Transcription factor that possibly regulate vista5489[chr1:230240540-230240902]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 230240256 230240845 SIN3AK20 UCSC Txn Factor no Conserved 107878467
chr1 230240296 230241043 STAT3 UCSC Txn Factor no Conserved 107878470
chr1 230240412 230240916 TCF7L2 UCSC Txn Factor no Conserved 107878494
chr1 230240414 230241048 EP300 UCSC Txn Factor no Conserved 107878496
chr1 230240417 230240830 BCL3 UCSC Txn Factor no Conserved 107878499
chr1 230240432 230241025 TCF12 UCSC Txn Factor no Conserved 107878504
chr1 230240440 230240918 FOSL2 UCSC Txn Factor no Conserved 107878509
chr1 230240442 230241120 STAT1 UCSC Txn Factor no Conserved 107878512
chr1 230240453 230240769 EBF1 UCSC Txn Factor no Conserved 107878516
chr1 230240464 230240850 FOS UCSC Txn Factor no Conserved 107878518
chr1 230240473 230240812 JUND UCSC Txn Factor no Conserved 107878524
chr1 230240503 230240809 CEBPB UCSC Txn Factor no Conserved 107878542
chr1 230240517 230240798 GABPA UCSC Txn Factor no Conserved 107878552
chr1 230240621 230240776 PRDM1 UCSC Txn Factor no Conserved 107878568
chr1 230240540 230240544 YY1 TRANSFAC yes 36020903
chr1 230240540 230240544 YY1 TRANSFAC yes 118477434
chr1 230240554 230240565 FLI1 JASPAR yes 36020904
chr1 230240554 230240565 FLI1 JASPAR yes 118477435
chr1 230240572 230240582 ID4 JASPAR yes 36020905
chr1 230240572 230240582 TCF4 JASPAR yes 36020906
chr1 230240572 230240582 ID4 JASPAR yes 118477436
chr1 230240572 230240582 TCF4 JASPAR yes 118477437
chr1 230240574 230240579 USF2 TRANSFAC yes 36020907
chr1 230240574 230240579 USF2 TRANSFAC yes 118477438
chr1 230240577 230240591 TLX1 JASPAR yes 36020908
chr1 230240577 230240591 TLX1 JASPAR yes 118477439
chr1 230240578 230240592 TLX1 JASPAR yes 36020909
chr1 230240578 230240592 TLX1 JASPAR yes 118477440
chr1 230240590 230240601 BATF JASPAR yes 36020910
chr1 230240590 230240601 BATF JASPAR yes 118477441
chr1 230240591 230240602 JUNB JASPAR yes 36020911
chr1 230240591 230240602 NFE2L2 JASPAR yes 36020912
chr1 230240591 230240602 JUNB JASPAR yes 118477442
chr1 230240591 230240602 NFE2L2 JASPAR yes 118477443
chr1 230240592 230240603 FOS JASPAR yes 36020913
chr1 230240592 230240603 FOSL1 JASPAR yes 36020914
chr1 230240592 230240603 JUND JASPAR yes 36020915
chr1 230240592 230240603 FOS JASPAR yes 118477444
chr1 230240592 230240603 FOSL1 JASPAR yes 118477445
chr1 230240592 230240603 JUND JASPAR yes 118477446
chr1 230240593 230240604 FOSL2 JASPAR yes 36020916
chr1 230240593 230240604 JUNB JASPAR yes 36020917
chr1 230240593 230240604 FOSL2 JASPAR yes 118477447
chr1 230240593 230240604 JUNB JASPAR yes 118477448
chr1 230240593 230240607 JUN JASPAR yes 36020918
chr1 230240593 230240607 JUN JASPAR yes 118477449
chr1 230240596 230240614 MAFF JASPAR yes 36020919
chr1 230240596 230240614 MAFF JASPAR yes 118477450
chr1 230240598 230240610 PKNOX1 JASPAR yes 36020920
chr1 230240598 230240610 PKNOX2 JASPAR yes 36020921
chr1 230240598 230240610 PKNOX1 JASPAR yes 118477451
chr1 230240598 230240610 PKNOX2 JASPAR yes 118477452
chr1 230240599 230240609 TFAP4 JASPAR yes 36020922
chr1 230240599 230240609 TFAP4 JASPAR yes 118477453
chr1 230240612 230240623 NFKB1 JASPAR yes 36020923
chr1 230240612 230240623 NFKB1 JASPAR yes 118477454
chr1 230240613 230240623 REL JASPAR yes 36020924
chr1 230240613 230240623 REL JASPAR yes 118477455
chr1 230240658 230240669 CEBPA JASPAR yes 36020925
chr1 230240658 230240669 CEBPA JASPAR yes 118477456
chr1 230240677 230240683 ETS1 JASPAR yes 36020926
chr1 230240677 230240683 ETS1 JASPAR yes 118477457
chr1 230240677 230240691 IRF7 JASPAR yes 36020927
chr1 230240677 230240691 IRF7 JASPAR yes 118477458
chr1 230240678 230240692 JUN JASPAR yes 36020928
chr1 230240678 230240692 STAT1 JASPAR yes 36020929
chr1 230240678 230240692 JUN JASPAR yes 118477459
chr1 230240678 230240692 STAT1 JASPAR yes 118477460
chr1 230240680 230240691 BATF JASPAR yes 36020930
chr1 230240680 230240691 DUX4 JASPAR yes 36020931
chr1 230240680 230240691 BATF JASPAR yes 118477461
chr1 230240680 230240691 DUX4 JASPAR yes 118477462
chr1 230240682 230240693 FOS JASPAR yes 36020932
chr1 230240682 230240693 FOSL1 JASPAR yes 36020933
chr1 230240682 230240693 JUND JASPAR yes 36020934
chr1 230240682 230240693 FOS JASPAR yes 118477463
chr1 230240682 230240693 FOSL1 JASPAR yes 118477464
chr1 230240682 230240693 JUND JASPAR yes 118477465
chr1 230240684 230240690 JUN TRANSFAC yes 36020935
chr1 230240684 230240690 JUN TRANSFAC yes 118477466
chr1 230240692 230240707 PRDM1 JASPAR yes 36020936
chr1 230240692 230240707 PRDM1 JASPAR yes 118477467
chr1 230240719 230240725 HiNF-A TRANSFAC yes 36020937
chr1 230240719 230240725 HiNF-A TRANSFAC yes 118477468
chr1 230240723 230240733 TEAD1 JASPAR yes 36020938
chr1 230240723 230240733 TEAD4 JASPAR yes 36020939
chr1 230240723 230240733 TEAD1 JASPAR yes 118477469
chr1 230240723 230240733 TEAD4 JASPAR yes 118477470
chr1 230240724 230240732 TEAD3 JASPAR yes 36020940
chr1 230240724 230240732 TEAD3 JASPAR yes 118477471
chr1 230240738 230240752 PLAG1 JASPAR yes 36020941
chr1 230240738 230240752 PLAG1 JASPAR yes 118477472
chr1 230240755 230240766 FOXH1 JASPAR yes 36020942
chr1 230240755 230240766 FOXH1 JASPAR yes 118477473
chr1 230240756 230240762 ZNF354C JASPAR yes 36020943
chr1 230240756 230240762 ZNF354C JASPAR yes 118477474
chr1 230240767 230240775 TBX5 JASPAR yes 36020944
chr1 230240767 230240775 TBX5 JASPAR yes 118477475
chr1 230240779 230240793 GLIS2 JASPAR yes 36020945
chr1 230240779 230240793 GLIS2 JASPAR yes 118477476
chr1 230240787 230240792 SP1 TRANSFAC yes 36020946
chr1 230240787 230240792 SP1 TRANSFAC yes 118477477
chr1 230240790 230240801 FLI1 JASPAR yes 36020947
chr1 230240790 230240801 FLI1 JASPAR yes 118477478
chr1 230240791 230240801 GABPA JASPAR yes 36020948
chr1 230240791 230240801 GABPA JASPAR yes 118477479
chr1 230240791 230240806 STAT1 JASPAR yes 36020949
chr1 230240791 230240806 STAT1 JASPAR yes 118477480
chr1 230240792 230240800 EHF JASPAR yes 36020950
chr1 230240792 230240800 EHF JASPAR yes 118477481
chr1 230240793 230240804 STAT1 JASPAR yes 36020951
chr1 230240793 230240804 STAT1 JASPAR yes 118477482
chr1 230240819 230240840 ZNF263 JASPAR yes 36020952
chr1 230240819 230240840 ZNF263 JASPAR yes 118477483
chr1 230240821 230240833 INSM1 JASPAR yes 36020953
chr1 230240821 230240833 INSM1 JASPAR yes 118477484
chr1 230240838 230240843 ETS2 TRANSFAC yes 36020954
chr1 230240838 230240843 ETS2 TRANSFAC yes 118477485
chr1 230240870 230240874 YY1 TRANSFAC yes 36020955
chr1 230240870 230240874 YY1 TRANSFAC yes 118477486
chr1 230240881 230240889 EHF JASPAR yes 36020956
chr1 230240881 230240889 EHF JASPAR yes 118477487
chr1 230240883 230240888 ETS2 TRANSFAC yes 36020957
chr1 230240883 230240888 ETS2 TRANSFAC yes 118477488
chr1 230240888 230240899 STAT3 JASPAR yes 36020958
chr1 230240888 230240899 STAT3 JASPAR yes 118477489
chr1 230240895 230240910 TP53 JASPAR yes 36020959
chr1 230240895 230240910 TP53 JASPAR yes 118477490
SNP sites on vista5489[chr1:230240540-230240902]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 230240668 rs76633437 A G
BCL3 CEBPA CEBPB EBF1 EP300 FOS FOSL2 GABPA JUND PRDM1 SIN3AK20 STAT1 STAT3 TCF12 TCF7L2
1014653
chr1 230240669 rs112369016 C T
BCL3 CEBPA CEBPB EBF1 EP300 FOS FOSL2 GABPA JUND PRDM1 SIN3AK20 STAT1 STAT3 TCF12 TCF7L2
1014654
chr1 230240754 rs115238340 G A,C
BCL3 CEBPB EBF1 EP300 FOS FOSL2 GABPA JUND PRDM1 SIN3AK20 STAT1 STAT3 TCF12 TCF7L2
1014655
chr1 230240755 rs12032088 C T
BCL3 CEBPB EBF1 EP300 FOS FOSL2 FOXH1 GABPA JUND PRDM1 SIN3AK20 STAT1 STAT3 TCF12 TCF7L2
1014656
Genes possibly regulated by vista5489[chr1:230240540-230240902]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 230193536 230417870 + GALNT2 ENSG00000143641.8 230193536 0.77 0.99 1937 52996
Expression level of Genes
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miRNAs possibly regulated by vista5489[chr1:230240540-230240902]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results