EnhancerDB
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  3. vista54890[chr7:2773642-2774144]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54890[chr7:2773642-2774144]
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Tissue distribution of vista54890
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Transcription factor that possibly regulate vista54890[chr7:2773642-2774144]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 2773648 2773665 RARA JASPAR yes 12553224
chr7 2773648 2773665 RXRA JASPAR yes 12553225
chr7 2773648 2773665 RARA JASPAR yes 26016451
chr7 2773648 2773665 RXRA JASPAR yes 26016452
chr7 2773651 2773655 YY1 TRANSFAC yes 12553226
chr7 2773651 2773655 YY1 TRANSFAC yes 26016453
chr7 2773653 2773663 HOXA13 JASPAR yes 12553227
chr7 2773653 2773663 HOXC10 JASPAR yes 12553228
chr7 2773653 2773663 HOXD11 JASPAR yes 12553229
chr7 2773653 2773663 HOXD13 JASPAR yes 12553230
chr7 2773653 2773663 HOXA13 JASPAR yes 26016454
chr7 2773653 2773663 HOXC10 JASPAR yes 26016455
chr7 2773653 2773663 HOXD11 JASPAR yes 26016456
chr7 2773653 2773663 HOXD13 JASPAR yes 26016457
chr7 2773653 2773664 HOXA10 JASPAR yes 12553231
chr7 2773653 2773664 HOXC11 JASPAR yes 12553232
chr7 2773653 2773664 HOXC12 JASPAR yes 12553233
chr7 2773653 2773664 HOXC13 JASPAR yes 12553234
chr7 2773653 2773664 HOXD12 JASPAR yes 12553235
chr7 2773653 2773664 HOXA10 JASPAR yes 26016458
chr7 2773653 2773664 HOXC11 JASPAR yes 26016459
chr7 2773653 2773664 HOXC12 JASPAR yes 26016460
chr7 2773653 2773664 HOXC13 JASPAR yes 26016461
chr7 2773653 2773664 HOXD12 JASPAR yes 26016462
chr7 2773654 2773663 CDX1 JASPAR yes 12553236
chr7 2773654 2773663 CDX1 JASPAR yes 26016463
chr7 2773654 2773665 CDX2 JASPAR yes 12553237
chr7 2773654 2773665 CDX2 JASPAR yes 26016464
chr7 2773658 2773668 SREBF2 JASPAR yes 12553238
chr7 2773658 2773668 SREBF2 JASPAR yes 26016465
chr7 2773658 2773672 RORA JASPAR yes 12553239
chr7 2773658 2773672 RORA JASPAR yes 26016466
chr7 2773678 2773684 HiNF-A TRANSFAC yes 12553240
chr7 2773678 2773684 HiNF-A TRANSFAC yes 26016467
chr7 2773686 2773697 NFKB1 JASPAR yes 12553241
chr7 2773686 2773697 NFKB1 JASPAR yes 26016468
chr7 2773695 2773715 RREB1 JASPAR yes 12553242
chr7 2773695 2773715 RREB1 JASPAR yes 26016469
chr7 2773696 2773700 YY1 TRANSFAC yes 12553243
chr7 2773696 2773700 YY1 TRANSFAC yes 26016470
chr7 2773699 2773711 PBX1 JASPAR yes 12553244
chr7 2773699 2773711 PBX1 JASPAR yes 26016471
chr7 2773719 2773725 YY1 JASPAR yes 12553245
chr7 2773719 2773725 YY1 JASPAR yes 26016472
chr7 2773737 2773752 NFYB JASPAR yes 12553246
chr7 2773737 2773752 NFYB JASPAR yes 26016473
chr7 2773739 2773755 NFYA JASPAR yes 12553247
chr7 2773739 2773755 NFYA JASPAR yes 26016474
chr7 2773740 2773758 NFYA JASPAR yes 12553248
chr7 2773740 2773758 NFYA JASPAR yes 26016475
chr7 2773744 2773748 H1TF2 TRANSFAC yes 12553249
chr7 2773744 2773748 NFE TRANSFAC yes 12553250
chr7 2773744 2773748 SRF TRANSFAC yes 12553251
chr7 2773744 2773748 H1TF2 TRANSFAC yes 26016476
chr7 2773744 2773748 NFE TRANSFAC yes 26016477
chr7 2773744 2773748 SRF TRANSFAC yes 26016478
chr7 2773745 2773759 ONECUT2 JASPAR yes 12553252
chr7 2773745 2773759 ONECUT2 JASPAR yes 26016479
chr7 2773748 2773758 CUX1 JASPAR yes 12553253
chr7 2773748 2773758 CUX2 JASPAR yes 12553254
chr7 2773748 2773758 CUX1 JASPAR yes 26016480
chr7 2773748 2773758 CUX2 JASPAR yes 26016481
chr7 2773750 2773761 DMRT3 JASPAR yes 12553255
chr7 2773750 2773761 DMRT3 JASPAR yes 26016482
chr7 2773812 2773825 ELF1 JASPAR yes 12553256
chr7 2773812 2773825 ELF1 JASPAR yes 26016483
chr7 2773815 2773826 FLI1 JASPAR yes 12553257
chr7 2773815 2773826 FLI1 JASPAR yes 26016484
chr7 2773830 2773838 E2F1 JASPAR yes 12553258
chr7 2773830 2773838 E2F1 JASPAR yes 26016485
chr7 2773853 2773857 LFA1 TRANSFAC yes 12553259
chr7 2773853 2773857 LFA1 TRANSFAC yes 26016486
chr7 2773859 2773880 REST JASPAR yes 12553260
chr7 2773859 2773880 REST JASPAR yes 26016487
chr7 2773860 2773879 REST JASPAR yes 12553261
chr7 2773860 2773879 REST JASPAR yes 26016488
chr7 2773876 2773888 ZBTB7A JASPAR yes 12553262
chr7 2773876 2773888 ZBTB7A JASPAR yes 26016489
chr7 2773877 2773889 ZBTB7B JASPAR yes 12553263
chr7 2773877 2773889 ZBTB7C JASPAR yes 12553264
chr7 2773877 2773889 ZBTB7B JASPAR yes 26016490
chr7 2773877 2773889 ZBTB7C JASPAR yes 26016491
chr7 2773883 2773895 ZBTB7A JASPAR yes 12553265
chr7 2773883 2773895 ZBTB7A JASPAR yes 26016492
chr7 2773884 2773896 GLI2 JASPAR yes 12553266
chr7 2773884 2773896 GLI2 JASPAR yes 26016493
chr7 2773884 2773899 RUNX2 JASPAR yes 12553267
chr7 2773884 2773899 RUNX2 JASPAR yes 26016494
chr7 2773897 2773907 GCM2 JASPAR yes 12553268
chr7 2773897 2773907 GCM2 JASPAR yes 26016495
chr7 2773930 2773936 TCF1 TRANSFAC yes 12553269
chr7 2773930 2773936 TCF1 TRANSFAC yes 26016496
chr7 2773946 2773960 ONECUT3 JASPAR yes 12553270
chr7 2773946 2773960 ONECUT3 JASPAR yes 26016497
chr7 2773948 2773959 PHOX2A JASPAR yes 12553271
chr7 2773948 2773959 PHOX2A JASPAR yes 26016498
chr7 2773949 2773959 PAX3 JASPAR yes 12553272
chr7 2773949 2773959 PAX3 JASPAR yes 26016499
chr7 2773952 2773956 H1TF2 TRANSFAC yes 12553273
chr7 2773952 2773956 NFE TRANSFAC yes 12553274
chr7 2773952 2773956 SRF TRANSFAC yes 12553275
chr7 2773952 2773956 H1TF2 TRANSFAC yes 26016500
chr7 2773952 2773956 NFE TRANSFAC yes 26016501
chr7 2773952 2773956 SRF TRANSFAC yes 26016502
chr7 2773952 2773960 DLX6 JASPAR yes 12553276
chr7 2773952 2773960 MSX2 JASPAR yes 12553277
chr7 2773952 2773960 DLX6 JASPAR yes 26016503
chr7 2773952 2773960 MSX2 JASPAR yes 26016504
chr7 2773966 2773979 HSF2 JASPAR yes 12553278
chr7 2773966 2773979 HSF2 JASPAR yes 26016505
chr7 2773969 2773973 TEAD2 TRANSFAC yes 12553279
chr7 2773969 2773973 TEAD2 TRANSFAC yes 26016506
chr7 2773977 2773991 RXRB JASPAR yes 12553280
chr7 2773977 2773991 RXRG JASPAR yes 12553281
chr7 2773977 2773991 RXRB JASPAR yes 26016507
chr7 2773977 2773991 RXRG JASPAR yes 26016508
chr7 2773977 2773992 HNF4G JASPAR yes 12553282
chr7 2773977 2773992 NR2C2 JASPAR yes 12553283
chr7 2773977 2773992 HNF4G JASPAR yes 26016509
chr7 2773977 2773992 NR2C2 JASPAR yes 26016510
chr7 2773978 2773992 TCF7L2 JASPAR yes 12553284
chr7 2773978 2773992 TCF7L2 JASPAR yes 26016511
chr7 2773983 2773998 HNF4A JASPAR yes 12553285
chr7 2773983 2773998 HNF4A JASPAR yes 26016512
chr7 2774012 2774022 SP1 JASPAR yes 12553286
chr7 2774012 2774022 SP1 JASPAR yes 26016513
chr7 2774013 2774018 SP1 TRANSFAC yes 12553287
chr7 2774013 2774018 SP1 TRANSFAC yes 26016514
chr7 2774014 2774019 SP1 TRANSFAC yes 12553288
chr7 2774014 2774019 SP1 TRANSFAC yes 26016515
chr7 2774014 2774020 SP1 TRANSFAC yes 12553289
chr7 2774014 2774020 SP1 TRANSFAC yes 26016516
chr7 2774019 2774023 ESR1 TRANSFAC yes 12553290
chr7 2774019 2774023 ESR1 TRANSFAC yes 26016517
chr7 2774027 2774047 ESR1 JASPAR yes 12553291
chr7 2774027 2774047 ESR1 JASPAR yes 26016518
chr7 2774031 2774048 ESR1 JASPAR yes 12553292
chr7 2774031 2774048 ESR1 JASPAR yes 26016519
chr7 2774035 2774044 THAP1 JASPAR yes 12553293
chr7 2774035 2774044 THAP1 JASPAR yes 26016520
chr7 2774041 2774048 JUN TRANSFAC yes 12553294
chr7 2774041 2774048 JUN TRANSFAC yes 26016521
chr7 2774050 2774065 STAT1 JASPAR yes 12553295
chr7 2774050 2774065 STAT1 JASPAR yes 26016522
chr7 2774057 2774062 ETS2 TRANSFAC yes 12553296
chr7 2774057 2774062 ETS2 TRANSFAC yes 26016523
chr7 2774078 2774094 RFX2 JASPAR yes 12553297
chr7 2774078 2774094 RFX3 JASPAR yes 12553298
chr7 2774078 2774094 RFX4 JASPAR yes 12553299
chr7 2774078 2774094 RFX5 JASPAR yes 12553300
chr7 2774078 2774094 RFX2 JASPAR yes 26016524
chr7 2774078 2774094 RFX3 JASPAR yes 26016525
chr7 2774078 2774094 RFX4 JASPAR yes 26016526
chr7 2774078 2774094 RFX5 JASPAR yes 26016527
chr7 2774099 2774103 LFA1 TRANSFAC yes 12553301
chr7 2774099 2774103 LFA1 TRANSFAC yes 26016528
chr7 2774101 2774112 ESRRA JASPAR yes 12553302
chr7 2774101 2774112 ESRRB JASPAR yes 12553303
chr7 2774101 2774112 ESRRA JASPAR yes 26016529
chr7 2774101 2774112 ESRRB JASPAR yes 26016530
chr7 2774104 2774121 RXRA JASPAR yes 12553304
chr7 2774104 2774121 RXRA JASPAR yes 26016531
chr7 2774105 2774109 ESR1 TRANSFAC yes 12553305
chr7 2774105 2774109 ESR1 TRANSFAC yes 26016532
chr7 2774108 2774121 ZBTB18 JASPAR yes 12553306
chr7 2774108 2774121 ZBTB18 JASPAR yes 26016533
chr7 2774109 2774119 MAX JASPAR yes 12553307
chr7 2774109 2774119 MAX JASPAR yes 26016534
SNP sites on vista54890[chr7:2773642-2774144]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 2773645 rs149417288 C T no 9585419
chr7 2773661 rs147511646 G C
CDX1 CDX2 HOXA10 HOXA13 HOXC10 HOXC11 HOXC12 HOXC13 HOXD11 HOXD12 HOXD13 RARA RORA RXRA SREBF2
9585420
chr7 2773678 rs558327754 C G
HiNF-A
9585421
chr7 2773862 rs375592123 G A
REST
9585422
chr7 2773885 rs193021278 C T
GLI2 RUNX2 ZBTB7A ZBTB7B ZBTB7C
9585423
chr7 2773930 rs74994097 C G
TCF1
9585424
chr7 2773971 rs142212355 A G
HSF2 TEAD2
9585425
chr7 2773986 rs151232523 G A
HNF4A HNF4G NR2C2 RXRB RXRG TCF7L2
9585426
chr7 2774125 rs73047387 G A no 9585427
chr7 2774130 rs140292970 C T no 9585428
chr7 2774131 rs113535557 G A no 9585429
Genes possibly regulated by vista54890[chr7:2773642-2774144]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 2719156 2815134 + AMZ1 ENSG00000174945.9 2719156 0.82 0.95 7180 45514
Expression level of Genes
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miRNAs possibly regulated by vista54890[chr7:2773642-2774144]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results