EnhancerDB
  1. Home
  2. Enhancers
  3. vista54895[chr7:2812534-2812892]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54895[chr7:2812534-2812892]
Back to top
Tissue distribution of vista54895
Back to top
Transcription factor that possibly regulate vista54895[chr7:2812534-2812892]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 2812524 2812991 RELA UCSC Txn Factor no Conserved 108543065
chr7 2812622 2812868 RUNX3 UCSC Txn Factor no Conserved 108543066
chr7 2812623 2812839 SPI1 UCSC Txn Factor no Conserved 108543067
chr7 2812541 2812555 POU4F1 JASPAR yes 12556219
chr7 2812541 2812555 POU4F1 JASPAR yes 26016816
chr7 2812545 2812562 ZNF410 JASPAR yes 12556220
chr7 2812545 2812562 ZNF410 JASPAR yes 26016817
chr7 2812562 2812566 YY1 TRANSFAC yes 12556221
chr7 2812562 2812566 YY1 TRANSFAC yes 26016818
chr7 2812573 2812584 CDX2 JASPAR yes 12556222
chr7 2812573 2812584 CDX2 JASPAR yes 26016819
chr7 2812574 2812581 GATA1 TRANSFAC yes 12556223
chr7 2812574 2812581 GATA1 TRANSFAC yes 26016820
chr7 2812576 2812586 MEF2A JASPAR yes 12556224
chr7 2812576 2812586 MEF2A JASPAR yes 26016821
chr7 2812577 2812581 TEAD2 TRANSFAC yes 12556225
chr7 2812577 2812581 TEAD2 TRANSFAC yes 26016822
chr7 2812577 2812582 TBP TRANSFAC yes 12556226
chr7 2812577 2812582 TBP TRANSFAC yes 26016823
chr7 2812578 2812593 FOXP1 JASPAR yes 12556227
chr7 2812578 2812593 FOXP1 JASPAR yes 26016824
chr7 2812578 2812599 IRF1 JASPAR yes 12556228
chr7 2812578 2812599 IRF1 JASPAR yes 26016825
chr7 2812600 2812604 H1TF2 TRANSFAC yes 12556229
chr7 2812600 2812604 NFE TRANSFAC yes 12556230
chr7 2812600 2812604 SRF TRANSFAC yes 12556231
chr7 2812600 2812604 H1TF2 TRANSFAC yes 26016826
chr7 2812600 2812604 NFE TRANSFAC yes 26016827
chr7 2812600 2812604 SRF TRANSFAC yes 26016828
chr7 2812603 2812609 ZNF354C JASPAR yes 12556232
chr7 2812603 2812609 ZNF354C JASPAR yes 26016829
chr7 2812630 2812641 BATF JASPAR yes 12556233
chr7 2812630 2812641 BATF JASPAR yes 26016830
chr7 2812632 2812642 EMX1 JASPAR yes 12556234
chr7 2812632 2812642 HOXB3 JASPAR yes 12556235
chr7 2812632 2812642 MEOX2 JASPAR yes 12556236
chr7 2812632 2812642 EMX1 JASPAR yes 26016831
chr7 2812632 2812642 HOXB3 JASPAR yes 26016832
chr7 2812632 2812642 MEOX2 JASPAR yes 26016833
chr7 2812633 2812641 NKX6-1 JASPAR yes 12556237
chr7 2812633 2812641 NKX6-1 JASPAR yes 26016834
chr7 2812635 2812639 YY1 TRANSFAC yes 12556238
chr7 2812635 2812639 YY1 TRANSFAC yes 26016835
chr7 2812653 2812663 BARHL2 JASPAR yes 12556239
chr7 2812653 2812663 BARHL2 JASPAR yes 26016836
chr7 2812665 2812669 YY1 TRANSFAC yes 12556240
chr7 2812665 2812669 YY1 TRANSFAC yes 26016837
chr7 2812668 2812677 SRY JASPAR yes 12556241
chr7 2812668 2812677 SRY JASPAR yes 26016838
chr7 2812674 2812688 TCF7L2 JASPAR yes 12556242
chr7 2812674 2812688 TCF7L2 JASPAR yes 26016839
chr7 2812707 2812728 IRF1 JASPAR yes 12556243
chr7 2812707 2812728 IRF1 JASPAR yes 26016840
chr7 2812709 2812724 IRF9 JASPAR yes 12556244
chr7 2812709 2812724 IRF9 JASPAR yes 26016841
chr7 2812710 2812724 IRF8 JASPAR yes 12556245
chr7 2812710 2812724 IRF8 JASPAR yes 26016842
chr7 2812711 2812725 STAT1 JASPAR yes 12556246
chr7 2812711 2812725 STAT1 JASPAR yes 26016843
chr7 2812711 2812726 PRDM1 JASPAR yes 12556247
chr7 2812711 2812726 STAT2 JASPAR yes 12556248
chr7 2812711 2812726 PRDM1 JASPAR yes 26016844
chr7 2812711 2812726 STAT2 JASPAR yes 26016845
chr7 2812711 2812729 IRF2 JASPAR yes 12556249
chr7 2812711 2812729 IRF2 JASPAR yes 26016846
chr7 2812712 2812724 IRF1 JASPAR yes 12556250
chr7 2812712 2812724 IRF1 JASPAR yes 26016847
chr7 2812723 2812735 GLI2 JASPAR yes 12556251
chr7 2812723 2812735 GLI2 JASPAR yes 26016848
chr7 2812728 2812747 CTCF JASPAR yes 12556252
chr7 2812728 2812747 CTCF JASPAR yes 26016849
chr7 2812729 2812733 ESR1 TRANSFAC yes 12556253
chr7 2812729 2812733 ESR1 TRANSFAC yes 26016850
chr7 2812737 2812758 ZNF263 JASPAR yes 12556254
chr7 2812737 2812758 ZNF263 JASPAR yes 26016851
chr7 2812749 2812763 SPI1 JASPAR yes 12556255
chr7 2812749 2812763 SPIC JASPAR yes 12556256
chr7 2812749 2812763 SPI1 JASPAR yes 26016852
chr7 2812749 2812763 SPIC JASPAR yes 26016853
chr7 2812753 2812758 TFAP2A TRANSFAC yes 12556257
chr7 2812753 2812758 TFAP2A TRANSFAC yes 26016854
chr7 2812753 2812759 MZF1 JASPAR yes 12556258
chr7 2812753 2812759 MZF1 JASPAR yes 26016855
chr7 2812755 2812760 ETS2 TRANSFAC yes 12556259
chr7 2812755 2812760 ETS2 TRANSFAC yes 26016856
chr7 2812758 2812773 ZIC3 JASPAR yes 12556260
chr7 2812758 2812773 ZIC4 JASPAR yes 12556261
chr7 2812758 2812773 ZIC3 JASPAR yes 26016857
chr7 2812758 2812773 ZIC4 JASPAR yes 26016858
chr7 2812759 2812773 ZIC1 JASPAR yes 12556262
chr7 2812759 2812773 ZIC1 JASPAR yes 26016859
chr7 2812761 2812772 E2F4 JASPAR yes 12556263
chr7 2812761 2812772 E2F4 JASPAR yes 26016860
chr7 2812765 2812771 MAZ TRANSFAC yes 12556264
chr7 2812765 2812771 MAZ TRANSFAC yes 26016861
chr7 2812769 2812779 NFKB1 JASPAR yes 12556265
chr7 2812769 2812779 NFKB1 JASPAR yes 26016862
chr7 2812797 2812807 TFE3 JASPAR yes 12556266
chr7 2812797 2812807 TFE3 JASPAR yes 26016863
chr7 2812798 2812808 MAX JASPAR yes 12556267
chr7 2812798 2812808 MAX JASPAR yes 26016864
chr7 2812799 2812804 MYC TRANSFAC yes 12556268
chr7 2812799 2812804 USF1 TRANSFAC yes 12556269
chr7 2812799 2812804 USF2 TRANSFAC yes 12556270
chr7 2812799 2812804 MYC TRANSFAC yes 26016865
chr7 2812799 2812804 USF1 TRANSFAC yes 26016866
chr7 2812799 2812804 USF2 TRANSFAC yes 26016867
chr7 2812799 2812806 USF1 JASPAR yes 12556271
chr7 2812799 2812806 USF1 JASPAR yes 26016868
chr7 2812802 2812814 ZBTB7C JASPAR yes 12556272
chr7 2812802 2812814 ZBTB7C JASPAR yes 26016869
chr7 2812821 2812832 DMRT3 JASPAR yes 12556273
chr7 2812821 2812832 DMRT3 JASPAR yes 26016870
chr7 2812870 2812874 YY1 TRANSFAC yes 12556274
chr7 2812870 2812874 YY1 TRANSFAC yes 26016871
SNP sites on vista54895[chr7:2812534-2812892]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 2812540 rs147628683 G A
RELA
9585872
chr7 2812582 rs208341 A C,T
CDX2 FOXP1 IRF1 MEF2A RELA TBP
9585873
chr7 2812604 rs186139956 A G
H1TF2 NFE RELA SRF ZNF354C
9585874
chr7 2812619 rs567903084 C G
RELA
9585875
chr7 2812624 rs557822114 G GA
RELA RUNX3 SPI1
9585876
chr7 2812632 rs35957220 C G
BATF EMX1 HOXB3 MEOX2 RELA RUNX3 SPI1
9585877
chr7 2812656 rs139619683 TA T
BARHL2 RELA RUNX3 SPI1
9585878
chr7 2812659 rs556951730 A C
BARHL2 RELA RUNX3 SPI1
9585879
chr7 2812660 rs182258037 C T
BARHL2 RELA RUNX3 SPI1
9585880
chr7 2812675 rs186883770 A G
RELA RUNX3 SPI1 SRY TCF7L2
9585881
chr7 2812714 rs142283020 G A
IRF1 IRF2 IRF8 IRF9 PRDM1 RELA RUNX3 SPI1 STAT1 STAT2
9585882
chr7 2812717 rs191685626 G A
IRF1 IRF2 IRF8 IRF9 PRDM1 RELA RUNX3 SPI1 STAT1 STAT2
9585883
Genes possibly regulated by vista54895[chr7:2812534-2812892]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 2719156 2815134 + AMZ1 ENSG00000174945.9 2719156 0.82 0.95 7180 6622
chr7 2767746 2883958 - GNA12 ENSG00000146535.9 2883958 0.67 1.0 7181 28934
Expression level of Genes
Back to top
miRNAs possibly regulated by vista54895[chr7:2812534-2812892]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results