EnhancerDB
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  3. vista549[chr1:17387354-17387523]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista549[chr1:17387354-17387523]
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Tissue distribution of vista549
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Transcription factor that possibly regulate vista549[chr1:17387354-17387523]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 17387356 17387362 TBP TRANSFAC yes 27067833
chr1 17387356 17387362 TBP TRANSFAC yes 118240091
chr1 17387364 17387368 YY1 TRANSFAC yes 27067834
chr1 17387364 17387368 YY1 TRANSFAC yes 118240092
chr1 17387378 17387394 POU4F2 JASPAR yes 27067835
chr1 17387378 17387394 POU4F3 JASPAR yes 27067836
chr1 17387378 17387394 POU4F2 JASPAR yes 118240093
chr1 17387378 17387394 POU4F3 JASPAR yes 118240094
chr1 17387382 17387393 NFIL3 JASPAR yes 27067837
chr1 17387382 17387393 NFIL3 JASPAR yes 118240095
chr1 17387383 17387394 FOXB1 JASPAR yes 27067838
chr1 17387383 17387394 FOXB1 JASPAR yes 118240096
chr1 17387385 17387395 ALX3 JASPAR yes 27067839
chr1 17387385 17387395 GSX1 JASPAR yes 27067840
chr1 17387385 17387395 GSX2 JASPAR yes 27067841
chr1 17387385 17387395 HOXB2 JASPAR yes 27067842
chr1 17387385 17387395 HOXB3 JASPAR yes 27067843
chr1 17387385 17387395 MEOX2 JASPAR yes 27067844
chr1 17387385 17387395 MIXL1 JASPAR yes 27067845
chr1 17387385 17387395 MNX1 JASPAR yes 27067846
chr1 17387385 17387395 ALX3 JASPAR yes 118240097
chr1 17387385 17387395 GSX1 JASPAR yes 118240098
chr1 17387385 17387395 GSX2 JASPAR yes 118240099
chr1 17387385 17387395 HOXB2 JASPAR yes 118240100
chr1 17387385 17387395 HOXB3 JASPAR yes 118240101
chr1 17387385 17387395 MEOX2 JASPAR yes 118240102
chr1 17387385 17387395 MIXL1 JASPAR yes 118240103
chr1 17387385 17387395 MNX1 JASPAR yes 118240104
chr1 17387385 17387396 HOXA10 JASPAR yes 27067847
chr1 17387385 17387396 HOXA10 JASPAR yes 118240105
chr1 17387386 17387394 LMX1A JASPAR yes 27067848
chr1 17387386 17387394 LMX1B JASPAR yes 27067849
chr1 17387386 17387394 NKX6-1 JASPAR yes 27067850
chr1 17387386 17387394 NKX6-2 JASPAR yes 27067851
chr1 17387386 17387394 PDX1 JASPAR yes 27067852
chr1 17387386 17387394 VAX1 JASPAR yes 27067853
chr1 17387386 17387394 VAX2 JASPAR yes 27067854
chr1 17387386 17387394 VSX1 JASPAR yes 27067855
chr1 17387386 17387394 LMX1A JASPAR yes 118240106
chr1 17387386 17387394 LMX1B JASPAR yes 118240107
chr1 17387386 17387394 NKX6-1 JASPAR yes 118240108
chr1 17387386 17387394 NKX6-2 JASPAR yes 118240109
chr1 17387386 17387394 PDX1 JASPAR yes 118240110
chr1 17387386 17387394 VAX1 JASPAR yes 118240111
chr1 17387386 17387394 VAX2 JASPAR yes 118240112
chr1 17387386 17387394 VSX1 JASPAR yes 118240113
chr1 17387387 17387398 PHOX2A JASPAR yes 27067856
chr1 17387387 17387398 PROP1 JASPAR yes 27067857
chr1 17387387 17387398 PHOX2A JASPAR yes 118240114
chr1 17387387 17387398 PROP1 JASPAR yes 118240115
chr1 17387402 17387410 FOXL1 JASPAR yes 27067858
chr1 17387402 17387410 FOXL1 JASPAR yes 118240116
chr1 17387402 17387411 POU5F1B JASPAR yes 27067859
chr1 17387402 17387411 POU5F1B JASPAR yes 118240117
chr1 17387411 17387422 STAT3 JASPAR yes 27067860
chr1 17387411 17387422 STAT3 JASPAR yes 118240118
chr1 17387425 17387433 GATA3 JASPAR yes 27067861
chr1 17387425 17387433 GATA3 JASPAR yes 118240119
chr1 17387447 17387457 TBX21 JASPAR yes 27067862
chr1 17387447 17387457 TBX21 JASPAR yes 118240120
chr1 17387447 17387466 PAX5 JASPAR yes 27067863
chr1 17387447 17387466 PAX5 JASPAR yes 118240121
chr1 17387448 17387456 MGA JASPAR yes 27067864
chr1 17387448 17387456 TBX15 JASPAR yes 27067865
chr1 17387448 17387456 TBX1 JASPAR yes 27067866
chr1 17387448 17387456 TBX4 JASPAR yes 27067867
chr1 17387448 17387456 TBX5 JASPAR yes 27067868
chr1 17387448 17387456 MGA JASPAR yes 118240122
chr1 17387448 17387456 TBX15 JASPAR yes 118240123
chr1 17387448 17387456 TBX1 JASPAR yes 118240124
chr1 17387448 17387456 TBX4 JASPAR yes 118240125
chr1 17387448 17387456 TBX5 JASPAR yes 118240126
chr1 17387450 17387461 FLI1 JASPAR yes 27067869
chr1 17387450 17387461 FLI1 JASPAR yes 118240127
chr1 17387451 17387461 GABPA JASPAR yes 27067870
chr1 17387451 17387461 GABPA JASPAR yes 118240128
chr1 17387451 17387464 ELF1 JASPAR yes 27067871
chr1 17387451 17387464 ELF1 JASPAR yes 118240129
chr1 17387452 17387459 SPI1 JASPAR yes 27067872
chr1 17387452 17387459 SPI1 JASPAR yes 118240130
chr1 17387452 17387460 FEV JASPAR yes 27067873
chr1 17387452 17387460 FEV JASPAR yes 118240131
chr1 17387454 17387459 ETS2 TRANSFAC yes 27067874
chr1 17387454 17387459 ETS2 TRANSFAC yes 118240132
chr1 17387458 17387472 EBF1 JASPAR yes 27067875
chr1 17387458 17387472 EBF1 JASPAR yes 118240133
chr1 17387477 17387489 IRF1 JASPAR yes 27067876
chr1 17387477 17387489 IRF1 JASPAR yes 118240134
chr1 17387493 17387514 IRF1 JASPAR yes 27067877
chr1 17387493 17387514 IRF1 JASPAR yes 118240135
chr1 17387498 17387513 HSF1 JASPAR yes 27067878
chr1 17387498 17387513 HSF1 JASPAR yes 118240136
chr1 17387499 17387512 HSF2 JASPAR yes 27067879
chr1 17387499 17387512 HSF2 JASPAR yes 118240137
chr1 17387513 17387519 LEF1 TRANSFAC yes 27067880
chr1 17387513 17387519 SOX10 JASPAR yes 27067881
chr1 17387513 17387519 LEF1 TRANSFAC yes 118240138
chr1 17387513 17387519 SOX10 JASPAR yes 118240139
chr1 17387518 17387526 FOXL1 JASPAR yes 27067882
chr1 17387518 17387526 FOXL1 JASPAR yes 118240140
chr1 17387518 17387533 FOXA1 JASPAR yes 27067883
chr1 17387518 17387533 FOXA1 JASPAR yes 118240141
chr1 17387519 17387534 FOXP1 JASPAR yes 27067884
chr1 17387519 17387534 FOXP1 JASPAR yes 118240142
chr1 17387520 17387532 FOXC2 JASPAR yes 27067885
chr1 17387520 17387532 FOXC2 JASPAR yes 118240143
chr1 17387520 17387533 POU2F2 JASPAR yes 27067886
chr1 17387520 17387533 POU2F2 JASPAR yes 118240144
chr1 17387520 17387534 POU1F1 JASPAR yes 27067887
chr1 17387520 17387534 POU1F1 JASPAR yes 118240145
chr1 17387521 17387532 FOXB1 JASPAR yes 27067888
chr1 17387521 17387532 FOXC1 JASPAR yes 27067889
chr1 17387521 17387532 FOXB1 JASPAR yes 118240146
chr1 17387521 17387532 FOXC1 JASPAR yes 118240147
chr1 17387521 17387533 POU3F1 JASPAR yes 27067890
chr1 17387521 17387533 POU3F2 JASPAR yes 27067891
chr1 17387521 17387533 POU3F1 JASPAR yes 118240148
chr1 17387521 17387533 POU3F2 JASPAR yes 118240149
chr1 17387522 17387526 YY1 TRANSFAC yes 27067892
chr1 17387522 17387526 YY1 TRANSFAC yes 118240150
chr1 17387522 17387533 FOXA1 JASPAR yes 27067893
chr1 17387522 17387533 FOXA1 JASPAR yes 118240151
chr1 17387522 17387534 POU2F1 JASPAR yes 27067894
chr1 17387522 17387534 POU2F1 JASPAR yes 118240152
chr1 17387523 17387532 POU3F4 JASPAR yes 27067895
chr1 17387523 17387532 POU5F1B JASPAR yes 27067896
chr1 17387523 17387532 POU3F4 JASPAR yes 118240153
chr1 17387523 17387532 POU5F1B JASPAR yes 118240154
SNP sites on vista549[chr1:17387354-17387523]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 17387414 rs143337536 T C
STAT3
115419
Genes possibly regulated by vista549[chr1:17387354-17387523]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 17300997 17307330 - MFAP2 ENSG00000117122.9 17307330 0.89 1.0 238 19976
chr1 17312453 17338423 - ATP13A2 ENSG00000159363.13 17338423 0.65 1.0 239 51069
chr1 17345217 17380665 - SDHB ENSG00000117118.5 17380665 0.78 0.99 240 93311
chr1 17393256 17445948 - PADI2 ENSG00000117115.8 17445948 0.86 1.0 241 41575
Expression level of Genes
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miRNAs possibly regulated by vista549[chr1:17387354-17387523]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results