EnhancerDB
  1. Home
  2. Enhancers
  3. vista5490[chr1:230241590-230241986]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5490[chr1:230241590-230241986]
Back to top
Tissue distribution of vista5490
Back to top
Transcription factor that possibly regulate vista5490[chr1:230241590-230241986]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 230241480 230242199 STAT3 UCSC Txn Factor no Conserved 107878582
chr1 230241588 230242024 FOS UCSC Txn Factor no Conserved 107878602
chr1 230241632 230242022 EP300 UCSC Txn Factor no Conserved 107878613
chr1 230241633 230241922 FOSL2 UCSC Txn Factor no Conserved 107878615
chr1 230241635 230241872 BATF UCSC Txn Factor no Conserved 107878618
chr1 230241646 230241975 CEBPB UCSC Txn Factor no Conserved 107878629
chr1 230241689 230241937 STAT1 UCSC Txn Factor no Conserved 107878649
chr1 230241591 230241598 SPI1 JASPAR yes 36021027
chr1 230241591 230241598 SPI1 JASPAR yes 118477491
chr1 230241598 230241603 SP1 TRANSFAC yes 36021028
chr1 230241598 230241603 SP1 TRANSFAC yes 118477492
chr1 230241600 230241605 TFAP2A TRANSFAC yes 36021029
chr1 230241600 230241605 TFAP2A TRANSFAC yes 118477493
chr1 230241600 230241606 MZF1 JASPAR yes 36021030
chr1 230241600 230241606 MZF1 JASPAR yes 118477494
chr1 230241616 230241620 NFE TRANSFAC yes 36021031
chr1 230241616 230241620 NFE TRANSFAC yes 118477495
chr1 230241618 230241631 ATF4 JASPAR yes 36021032
chr1 230241618 230241631 ATF4 JASPAR yes 118477496
chr1 230241640 230241645 GATA1 TRANSFAC yes 36021033
chr1 230241640 230241645 GATA1 TRANSFAC yes 118477497
chr1 230241642 230241655 SMAD2 JASPAR yes 36021034
chr1 230241642 230241655 SMAD2 JASPAR yes 118477498
chr1 230241643 230241661 NFYA JASPAR yes 36021035
chr1 230241643 230241661 NFYA JASPAR yes 118477499
chr1 230241659 230241674 LEF1 JASPAR yes 36021036
chr1 230241659 230241674 LEF1 JASPAR yes 118477500
chr1 230241660 230241674 TCF7L2 JASPAR yes 36021037
chr1 230241660 230241674 TCF7L2 JASPAR yes 118477501
chr1 230241660 230241675 PRDM1 JASPAR yes 36021038
chr1 230241660 230241675 STAT2 JASPAR yes 36021039
chr1 230241660 230241675 PRDM1 JASPAR yes 118477502
chr1 230241660 230241675 STAT2 JASPAR yes 118477503
chr1 230241665 230241686 ZNF263 JASPAR yes 36021040
chr1 230241665 230241686 ZNF263 JASPAR yes 118477504
chr1 230241703 230241707 YY1 TRANSFAC yes 36021041
chr1 230241703 230241707 YY1 TRANSFAC yes 118477505
chr1 230241739 230241753 JUN JASPAR yes 36021042
chr1 230241739 230241753 JUN JASPAR yes 118477506
chr1 230241742 230241753 FOSL2 JASPAR yes 36021043
chr1 230241742 230241753 JUNB JASPAR yes 36021044
chr1 230241742 230241753 FOSL2 JASPAR yes 118477507
chr1 230241742 230241753 JUNB JASPAR yes 118477508
chr1 230241743 230241754 FOS JASPAR yes 36021045
chr1 230241743 230241754 FOSL1 JASPAR yes 36021046
chr1 230241743 230241754 JUND JASPAR yes 36021047
chr1 230241743 230241754 NFE2 JASPAR yes 36021048
chr1 230241743 230241754 FOS JASPAR yes 118477509
chr1 230241743 230241754 FOSL1 JASPAR yes 118477510
chr1 230241743 230241754 JUND JASPAR yes 118477511
chr1 230241743 230241754 NFE2 JASPAR yes 118477512
chr1 230241744 230241753 JDP2 JASPAR yes 36021049
chr1 230241744 230241753 JDP2 JASPAR yes 118477513
chr1 230241744 230241758 JUN JASPAR yes 36021050
chr1 230241744 230241758 JUN JASPAR yes 118477514
chr1 230241745 230241756 BATF JASPAR yes 36021051
chr1 230241745 230241756 DUX4 JASPAR yes 36021052
chr1 230241745 230241756 BATF JASPAR yes 118477515
chr1 230241745 230241756 DUX4 JASPAR yes 118477516
chr1 230241750 230241754 YY1 TRANSFAC yes 36021053
chr1 230241750 230241754 YY1 TRANSFAC yes 118477517
chr1 230241777 230241792 STAT1 JASPAR yes 36021054
chr1 230241777 230241792 STAT1 JASPAR yes 118477518
chr1 230241779 230241790 STAT1 JASPAR yes 36021055
chr1 230241779 230241790 STAT3 JASPAR yes 36021056
chr1 230241779 230241790 STAT1 JASPAR yes 118477519
chr1 230241779 230241790 STAT3 JASPAR yes 118477520
chr1 230241794 230241805 CEBPA JASPAR yes 36021057
chr1 230241794 230241805 CEBPA JASPAR yes 118477521
chr1 230241795 230241805 CEBPB JASPAR yes 36021058
chr1 230241795 230241805 CEBPD JASPAR yes 36021059
chr1 230241795 230241805 CEBPE JASPAR yes 36021060
chr1 230241795 230241805 CEBPG JASPAR yes 36021061
chr1 230241795 230241805 CEBPB JASPAR yes 118477522
chr1 230241795 230241805 CEBPD JASPAR yes 118477523
chr1 230241795 230241805 CEBPE JASPAR yes 118477524
chr1 230241795 230241805 CEBPG JASPAR yes 118477525
chr1 230241795 230241806 CEBPB JASPAR yes 36021062
chr1 230241795 230241806 CEBPB JASPAR yes 118477526
chr1 230241806 230241818 HNF1B JASPAR yes 36021063
chr1 230241806 230241818 HNF1B JASPAR yes 118477527
chr1 230241815 230241818 MYB TRANSFAC yes 36021064
chr1 230241815 230241818 MYB TRANSFAC yes 118477528
chr1 230241815 230241834 CTCF JASPAR yes 36021065
chr1 230241815 230241834 CTCF JASPAR yes 118477529
chr1 230241836 230241846 GCM2 JASPAR yes 36021066
chr1 230241836 230241846 GCM2 JASPAR yes 118477530
chr1 230241836 230241847 GCM1 JASPAR yes 36021067
chr1 230241836 230241847 GCM1 JASPAR yes 118477531
chr1 230241844 230241854 NFIA JASPAR yes 36021068
chr1 230241844 230241854 NFIA JASPAR yes 118477532
chr1 230241845 230241854 HIC2 JASPAR yes 36021069
chr1 230241845 230241854 HIC2 JASPAR yes 118477533
chr1 230241846 230241852 NFIC JASPAR yes 36021070
chr1 230241846 230241852 NFIC JASPAR yes 118477534
chr1 230241881 230241896 STAT1 JASPAR yes 36021071
chr1 230241881 230241896 STAT1 JASPAR yes 118477535
chr1 230241883 230241894 STAT3 JASPAR yes 36021072
chr1 230241883 230241894 STAT3 JASPAR yes 118477536
chr1 230241946 230241958 NHLH1 JASPAR yes 36021073
chr1 230241946 230241958 NHLH1 JASPAR yes 118477537
chr1 230241947 230241957 NHLH1 JASPAR yes 36021074
chr1 230241947 230241957 TFAP4 JASPAR yes 36021075
chr1 230241947 230241957 NHLH1 JASPAR yes 118477538
chr1 230241947 230241957 TFAP4 JASPAR yes 118477539
chr1 230241956 230241961 GATA1 TRANSFAC yes 36021076
chr1 230241956 230241961 GATA1 TRANSFAC yes 118477540
chr1 230241983 230241995 SRF JASPAR yes 36021077
chr1 230241983 230241995 SRF JASPAR yes 118477541
chr1 230241986 230241990 TEAD2 TRANSFAC yes 36021078
chr1 230241986 230241990 TEAD2 TRANSFAC yes 118477542
SNP sites on vista5490[chr1:230241590-230241986]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 230241637 rs116907532 C T
BATF EP300 FOS FOSL2 STAT3
1014674
chr1 230241702 rs190504212 A C
BATF CEBPB EP300 FOS FOSL2 STAT1 STAT3
1014675
chr1 230241738 rs145050205 G A
BATF CEBPB EP300 FOS FOSL2 STAT1 STAT3
1014676
chr1 230241839 rs11583591 T C
BATF CEBPB EP300 FOS FOSL2 GCM1 GCM2 STAT1 STAT3
1014677
chr1 230241926 rs187061540 T C
CEBPB EP300 FOS STAT1 STAT3
1014678
chr1 230241954 rs115992373 T C
CEBPB EP300 FOS NHLH1 STAT3 TFAP4
1014679
chr1 230241977 rs17381050 G C
EP300 FOS STAT3
1014680
Genes possibly regulated by vista5490[chr1:230241590-230241986]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 230193536 230417870 + GALNT2 ENSG00000143641.8 230193536 0.77 0.99 1937 51946
Expression level of Genes
Back to top
miRNAs possibly regulated by vista5490[chr1:230241590-230241986]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results