EnhancerDB
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  3. vista54908[chr7:2960647-2961036]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista54908[chr7:2960647-2961036]
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Tissue distribution of vista54908
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Transcription factor that possibly regulate vista54908[chr7:2960647-2961036]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr7 2960667 2960684 ZNF410 JASPAR yes 26017425
chr7 2960670 2960681 RUNX1 JASPAR yes 26017426
chr7 2960679 2960683 TEAD2 TRANSFAC yes 26017427
chr7 2960679 2960684 TBP TRANSFAC yes 26017428
chr7 2960683 2960703 RREB1 JASPAR yes 26017429
chr7 2960686 2960706 RREB1 JASPAR yes 26017430
chr7 2960697 2960706 ZEB1 JASPAR yes 26017431
chr7 2960697 2960711 ZIC1 JASPAR yes 26017432
chr7 2960697 2960712 ZIC3 JASPAR yes 26017433
chr7 2960697 2960712 ZIC4 JASPAR yes 26017434
chr7 2960698 2960708 TCF3 JASPAR yes 26017435
chr7 2960698 2960708 TCF4 JASPAR yes 26017436
chr7 2960699 2960708 SNAI2 JASPAR yes 26017437
chr7 2960700 2960705 USF2 TRANSFAC yes 26017438
chr7 2960716 2960720 TEAD2 TRANSFAC yes 26017439
chr7 2960726 2960732 ETS1 JASPAR yes 26017440
chr7 2960726 2960732 SPI1 JASPAR yes 26017441
chr7 2960747 2960750 MYB TRANSFAC yes 26017442
chr7 2960760 2960764 NFE TRANSFAC yes 26017443
chr7 2960773 2960778 SP1 TRANSFAC yes 26017444
chr7 2960778 2960788 TEAD1 JASPAR yes 26017445
chr7 2960778 2960788 TEAD4 JASPAR yes 26017446
chr7 2960778 2960790 TEAD1 JASPAR yes 26017447
chr7 2960779 2960787 TEAD3 JASPAR yes 26017448
chr7 2960804 2960812 RHOXF1 JASPAR yes 26017449
chr7 2960856 2960860 NFE TRANSFAC yes 26017450
chr7 2960862 2960866 H4TF2 TRANSFAC yes 26017451
chr7 2960866 2960886 ESR1 JASPAR yes 26017452
chr7 2960870 2960888 ESR2 JASPAR yes 26017453
chr7 2960878 2960885 E2F1 TRANSFAC yes 26017454
chr7 2960913 2960919 ZNF354C JASPAR yes 26017455
chr7 2960914 2960924 FIGLA JASPAR yes 26017456
chr7 2960916 2960921 USF2 TRANSFAC yes 26017457
chr7 2960919 2960933 NR2F1 JASPAR yes 26017458
chr7 2960919 2960933 TLX1 JASPAR yes 26017459
chr7 2960920 2960934 TLX1 JASPAR yes 26017460
chr7 2960920 2960935 TFAP2A JASPAR yes 26017461
chr7 2960920 2960935 TFAP2C JASPAR yes 26017462
chr7 2960921 2960933 INSM1 JASPAR yes 26017463
chr7 2960926 2960931 SP1 TRANSFAC yes 26017464
chr7 2960926 2960943 ESR1 JASPAR yes 26017465
chr7 2960942 2960946 NFE TRANSFAC yes 26017466
chr7 2960942 2960947 GATA1 TRANSFAC yes 26017467
chr7 2960942 2960948 GATA3 JASPAR yes 26017468
chr7 2960964 2960978 IRF8 JASPAR yes 26017469
chr7 2960965 2960983 IRF2 JASPAR yes 26017470
chr7 2960966 2960980 STAT1 JASPAR yes 26017471
chr7 2960986 2961001 HSF1 JASPAR yes 26017472
chr7 2961001 2961016 PRDM1 JASPAR yes 26017473
SNP sites on vista54908[chr7:2960647-2961036]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr7 2960656 rs529956871 C T no 9587977
chr7 2960864 rs551492292 G T
H4TF2
9587978
chr7 2960972 rs536916912 C T
IRF2 IRF8 STAT1
9587979
chr7 2961010 rs138533486 T G
PRDM1
9587980
chr7 2961030 rs117987246 T G no 9587981
Genes possibly regulated by vista54908[chr7:2960647-2961036]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr7 2767746 2883958 - GNA12 ENSG00000146535.9 2883958 0.67 1.0 7181 23311
Expression level of Genes
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miRNAs possibly regulated by vista54908[chr7:2960647-2961036]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results