EnhancerDB
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  3. vista5494[chr1:230279464-230279771]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5494[chr1:230279464-230279771]
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Tissue distribution of vista5494
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Transcription factor that possibly regulate vista5494[chr1:230279464-230279771]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 230279121 230280071 POLR2A UCSC Txn Factor no Conserved 107878731
chr1 230279229 230279850 GATA1 UCSC Txn Factor no Conserved 107878737
chr1 230279250 230279800 GATA2 UCSC Txn Factor no Conserved 107878739
chr1 230279350 230279631 TAL1 UCSC Txn Factor no Conserved 107878756
chr1 230279362 230279609 TEAD4 UCSC Txn Factor no Conserved 107878760
chr1 230279396 230279594 NR2F2 UCSC Txn Factor no Conserved 107878763
chr1 230279464 230279467 MYB TRANSFAC yes 36026027
chr1 230279464 230279467 MYB TRANSFAC yes 118477737
chr1 230279484 230279498 GATA2 JASPAR yes 36026028
chr1 230279484 230279498 GATA2 JASPAR yes 118477738
chr1 230279488 230279496 GATA3 JASPAR yes 36026029
chr1 230279488 230279496 GATA3 JASPAR yes 118477739
chr1 230279501 230279517 T JASPAR yes 36026030
chr1 230279501 230279517 T JASPAR yes 118477740
chr1 230279502 230279512 HEY1 JASPAR yes 36026031
chr1 230279502 230279512 MAX JASPAR yes 36026032
chr1 230279502 230279512 HEY1 JASPAR yes 118477741
chr1 230279502 230279512 MAX JASPAR yes 118477742
chr1 230279504 230279509 MYC TRANSFAC yes 36026033
chr1 230279504 230279509 USF1 TRANSFAC yes 36026034
chr1 230279504 230279509 USF2 TRANSFAC yes 36026035
chr1 230279504 230279509 MYC TRANSFAC yes 118477743
chr1 230279504 230279509 USF1 TRANSFAC yes 118477744
chr1 230279504 230279509 USF2 TRANSFAC yes 118477745
chr1 230279504 230279511 USF1 JASPAR yes 36026036
chr1 230279504 230279511 USF1 JASPAR yes 118477746
chr1 230279510 230279521 ESRRA JASPAR yes 36026037
chr1 230279510 230279521 ESRRA JASPAR yes 118477747
chr1 230279521 230279539 NFYA JASPAR yes 36026038
chr1 230279521 230279539 NFYA JASPAR yes 118477748
chr1 230279528 230279538 NEUROG2 JASPAR yes 36026039
chr1 230279528 230279538 NEUROG2 JASPAR yes 118477749
chr1 230279534 230279548 GLIS2 JASPAR yes 36026040
chr1 230279534 230279548 ZIC1 JASPAR yes 36026041
chr1 230279534 230279548 GLIS2 JASPAR yes 118477750
chr1 230279534 230279548 ZIC1 JASPAR yes 118477751
chr1 230279534 230279549 ZIC4 JASPAR yes 36026042
chr1 230279534 230279549 ZIC4 JASPAR yes 118477752
chr1 230279537 230279549 NHLH1 JASPAR yes 36026043
chr1 230279537 230279549 NHLH1 JASPAR yes 118477753
chr1 230279538 230279548 NHLH1 JASPAR yes 36026044
chr1 230279538 230279548 NHLH1 JASPAR yes 118477754
chr1 230279545 230279553 MEIS3 JASPAR yes 36026045
chr1 230279545 230279553 MEIS3 JASPAR yes 118477755
chr1 230279560 230279563 MYB TRANSFAC yes 36026046
chr1 230279560 230279563 MYB TRANSFAC yes 118477756
chr1 230279563 230279567 NFE TRANSFAC yes 36026047
chr1 230279563 230279567 NFE TRANSFAC yes 118477757
chr1 230279596 230279607 FOXA1 JASPAR yes 36026048
chr1 230279596 230279607 FOXA1 JASPAR yes 118477758
chr1 230279612 230279616 H4TF2 TRANSFAC yes 36026049
chr1 230279612 230279616 H4TF2 TRANSFAC yes 118477759
chr1 230279624 230279628 YY1 TRANSFAC yes 36026050
chr1 230279624 230279628 YY1 TRANSFAC yes 118477760
chr1 230279627 230279641 TLX1 JASPAR yes 36026051
chr1 230279627 230279641 TLX1 JASPAR yes 118477761
chr1 230279636 230279648 PKNOX1 JASPAR yes 36026052
chr1 230279636 230279648 PKNOX2 JASPAR yes 36026053
chr1 230279636 230279648 TGIF1 JASPAR yes 36026054
chr1 230279636 230279648 TGIF2 JASPAR yes 36026055
chr1 230279636 230279648 PKNOX1 JASPAR yes 118477762
chr1 230279636 230279648 PKNOX2 JASPAR yes 118477763
chr1 230279636 230279648 TGIF1 JASPAR yes 118477764
chr1 230279636 230279648 TGIF2 JASPAR yes 118477765
chr1 230279643 230279658 HSF1 JASPAR yes 36026056
chr1 230279643 230279658 HSF1 JASPAR yes 118477766
chr1 230279644 230279657 HSF1 JASPAR yes 36026057
chr1 230279644 230279657 HSF1 JASPAR yes 118477767
chr1 230279656 230279662 LEF1 TRANSFAC yes 36026058
chr1 230279656 230279662 SOX10 JASPAR yes 36026059
chr1 230279656 230279662 LEF1 TRANSFAC yes 118477768
chr1 230279656 230279662 SOX10 JASPAR yes 118477769
chr1 230279659 230279669 ALX3 JASPAR yes 36026060
chr1 230279659 230279669 EMX1 JASPAR yes 36026061
chr1 230279659 230279669 EMX2 JASPAR yes 36026062
chr1 230279659 230279669 EVX2 JASPAR yes 36026063
chr1 230279659 230279669 GSX1 JASPAR yes 36026064
chr1 230279659 230279669 GSX2 JASPAR yes 36026065
chr1 230279659 230279669 HOXA2 JASPAR yes 36026066
chr1 230279659 230279669 HOXB2 JASPAR yes 36026067
chr1 230279659 230279669 HOXB3 JASPAR yes 36026068
chr1 230279659 230279669 MEOX1 JASPAR yes 36026069
chr1 230279659 230279669 MEOX2 JASPAR yes 36026070
chr1 230279659 230279669 NOTO JASPAR yes 36026071
chr1 230279659 230279669 ALX3 JASPAR yes 118477770
chr1 230279659 230279669 EMX1 JASPAR yes 118477771
chr1 230279659 230279669 EMX2 JASPAR yes 118477772
chr1 230279659 230279669 EVX2 JASPAR yes 118477773
chr1 230279659 230279669 GSX1 JASPAR yes 118477774
chr1 230279659 230279669 GSX2 JASPAR yes 118477775
chr1 230279659 230279669 HOXA2 JASPAR yes 118477776
chr1 230279659 230279669 HOXB2 JASPAR yes 118477777
chr1 230279659 230279669 HOXB3 JASPAR yes 118477778
chr1 230279659 230279669 MEOX1 JASPAR yes 118477779
chr1 230279659 230279669 MEOX2 JASPAR yes 118477780
chr1 230279659 230279669 NOTO JASPAR yes 118477781
chr1 230279660 230279668 DLX6 JASPAR yes 36026072
chr1 230279660 230279668 EN1 JASPAR yes 36026073
chr1 230279660 230279668 LBX1 JASPAR yes 36026074
chr1 230279660 230279668 PAX4 JASPAR yes 36026075
chr1 230279660 230279668 PDX1 JASPAR yes 36026076
chr1 230279660 230279668 VAX1 JASPAR yes 36026077
chr1 230279660 230279668 VAX2 JASPAR yes 36026078
chr1 230279660 230279668 VSX1 JASPAR yes 36026079
chr1 230279660 230279668 VSX2 JASPAR yes 36026080
chr1 230279660 230279668 DLX6 JASPAR yes 118477782
chr1 230279660 230279668 EN1 JASPAR yes 118477783
chr1 230279660 230279668 LBX1 JASPAR yes 118477784
chr1 230279660 230279668 PAX4 JASPAR yes 118477785
chr1 230279660 230279668 PDX1 JASPAR yes 118477786
chr1 230279660 230279668 VAX1 JASPAR yes 118477787
chr1 230279660 230279668 VAX2 JASPAR yes 118477788
chr1 230279660 230279668 VSX1 JASPAR yes 118477789
chr1 230279660 230279668 VSX2 JASPAR yes 118477790
chr1 230279660 230279670 POU6F2 JASPAR yes 36026081
chr1 230279660 230279670 POU6F2 JASPAR yes 118477791
chr1 230279669 230279680 HOXA10 JASPAR yes 36026082
chr1 230279669 230279680 HOXA10 JASPAR yes 118477792
chr1 230279670 230279680 GBX2 JASPAR yes 36026083
chr1 230279670 230279680 GSX2 JASPAR yes 36026084
chr1 230279670 230279680 HOXB3 JASPAR yes 36026085
chr1 230279670 230279680 MNX1 JASPAR yes 36026086
chr1 230279670 230279680 RAX JASPAR yes 36026087
chr1 230279670 230279680 GBX2 JASPAR yes 118477793
chr1 230279670 230279680 GSX2 JASPAR yes 118477794
chr1 230279670 230279680 HOXB3 JASPAR yes 118477795
chr1 230279670 230279680 MNX1 JASPAR yes 118477796
chr1 230279670 230279680 RAX JASPAR yes 118477797
chr1 230279671 230279679 BARX1 JASPAR yes 36026088
chr1 230279671 230279679 BSX JASPAR yes 36026089
chr1 230279671 230279679 ISL2 JASPAR yes 36026090
chr1 230279671 230279679 LMX1B JASPAR yes 36026091
chr1 230279671 230279679 MSX1 JASPAR yes 36026092
chr1 230279671 230279679 MSX2 JASPAR yes 36026093
chr1 230279671 230279679 BARX1 JASPAR yes 118477798
chr1 230279671 230279679 BSX JASPAR yes 118477799
chr1 230279671 230279679 ISL2 JASPAR yes 118477800
chr1 230279671 230279679 LMX1B JASPAR yes 118477801
chr1 230279671 230279679 MSX1 JASPAR yes 118477802
chr1 230279671 230279679 MSX2 JASPAR yes 118477803
chr1 230279671 230279680 VENTX JASPAR yes 36026094
chr1 230279671 230279680 VENTX JASPAR yes 118477804
chr1 230279679 230279682 MYB TRANSFAC yes 36026095
chr1 230279679 230279682 MYB TRANSFAC yes 118477805
chr1 230279698 230279713 MEF2C JASPAR yes 36026096
chr1 230279698 230279713 MEF2C JASPAR yes 118477806
chr1 230279699 230279710 CEBPA JASPAR yes 36026097
chr1 230279699 230279710 CEBPA JASPAR yes 118477807
chr1 230279699 230279714 MEF2A JASPAR yes 36026098
chr1 230279699 230279714 MEF2A JASPAR yes 118477808
chr1 230279700 230279712 MEF2A JASPAR yes 36026099
chr1 230279700 230279712 MEF2A JASPAR yes 118477809
chr1 230279723 230279737 JUN JASPAR yes 36026100
chr1 230279723 230279737 JUN JASPAR yes 118477810
chr1 230279765 230279769 YY1 TRANSFAC yes 36026101
chr1 230279765 230279769 YY1 TRANSFAC yes 118477811
chr1 230279765 230279783 TP53 JASPAR yes 36026102
chr1 230279765 230279783 TP53 JASPAR yes 118477812
chr1 230279766 230279786 TP53 JASPAR yes 36026103
chr1 230279766 230279786 TP53 JASPAR yes 118477813
chr1 230279771 230279789 NR3C1 JASPAR yes 36026104
chr1 230279771 230279789 NR3C1 JASPAR yes 118477814
SNP sites on vista5494[chr1:230279464-230279771]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 230279582 rs4846905 A G
GATA1 GATA2 NR2F2 POLR2A TAL1 TEAD4
1015289
Genes possibly regulated by vista5494[chr1:230279464-230279771]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 230193536 230417870 + GALNT2 ENSG00000143641.8 230193536 0.77 0.99 1937 14072
Expression level of Genes
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miRNAs possibly regulated by vista5494[chr1:230279464-230279771]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results