EnhancerDB
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  3. vista5498[chr1:230463743-230463957]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5498[chr1:230463743-230463957]
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Tissue distribution of vista5498
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Transcription factor that possibly regulate vista5498[chr1:230463743-230463957]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 230463640 230463984 STAT3 UCSC Txn Factor no Conserved 107878823
chr1 230463651 230463938 FOS UCSC Txn Factor no Conserved 107878827
chr1 230463738 230463753 JUND JASPAR yes 36041127
chr1 230463738 230463753 JUND JASPAR yes 118477983
chr1 230463739 230463748 ZEB1 JASPAR yes 36041128
chr1 230463739 230463748 ZEB1 JASPAR yes 118477984
chr1 230463754 230463764 MEF2A JASPAR yes 36041129
chr1 230463754 230463764 MEF2A JASPAR yes 118477985
chr1 230463755 230463759 TEAD2 TRANSFAC yes 36041130
chr1 230463755 230463759 TEAD2 TRANSFAC yes 118477986
chr1 230463755 230463760 TBP TRANSFAC yes 36041131
chr1 230463755 230463760 TBP TRANSFAC yes 118477987
chr1 230463760 230463766 HiNF-A TRANSFAC yes 36041132
chr1 230463760 230463766 HiNF-A TRANSFAC yes 118477988
chr1 230463761 230463773 POU2F1 JASPAR yes 36041133
chr1 230463761 230463773 POU2F1 JASPAR yes 118477989
chr1 230463762 230463774 POU3F1 JASPAR yes 36041134
chr1 230463762 230463774 POU3F2 JASPAR yes 36041135
chr1 230463762 230463774 POU3F1 JASPAR yes 118477990
chr1 230463762 230463774 POU3F2 JASPAR yes 118477991
chr1 230463762 230463775 POU2F2 JASPAR yes 36041136
chr1 230463762 230463775 POU2F2 JASPAR yes 118477992
chr1 230463763 230463772 POU3F4 JASPAR yes 36041137
chr1 230463763 230463772 POU5F1B JASPAR yes 36041138
chr1 230463763 230463772 POU3F4 JASPAR yes 118477993
chr1 230463763 230463772 POU5F1B JASPAR yes 118477994
chr1 230463764 230463771 POU2F1 TRANSFAC yes 36041139
chr1 230463764 230463771 POU2F2 TRANSFAC yes 36041140
chr1 230463764 230463771 POU2F1 TRANSFAC yes 118477995
chr1 230463764 230463771 POU2F2 TRANSFAC yes 118477996
chr1 230463771 230463786 LEF1 JASPAR yes 36041141
chr1 230463771 230463786 LEF1 JASPAR yes 118477997
chr1 230463781 230463798 BCL6B JASPAR yes 36041142
chr1 230463781 230463798 BCL6B JASPAR yes 118477998
chr1 230463782 230463797 STAT1 JASPAR yes 36041143
chr1 230463782 230463797 STAT1 JASPAR yes 118477999
chr1 230463784 230463795 STAT1 JASPAR yes 36041144
chr1 230463784 230463795 STAT3 JASPAR yes 36041145
chr1 230463784 230463795 STAT1 JASPAR yes 118478000
chr1 230463784 230463795 STAT3 JASPAR yes 118478001
chr1 230463807 230463818 BATF JASPAR yes 36041146
chr1 230463807 230463818 BATF JASPAR yes 118478002
chr1 230463809 230463820 FOS JASPAR yes 36041147
chr1 230463809 230463820 FOSL1 JASPAR yes 36041148
chr1 230463809 230463820 JUND JASPAR yes 36041149
chr1 230463809 230463820 FOS JASPAR yes 118478003
chr1 230463809 230463820 FOSL1 JASPAR yes 118478004
chr1 230463809 230463820 JUND JASPAR yes 118478005
chr1 230463810 230463819 JDP2 JASPAR yes 36041150
chr1 230463810 230463819 JDP2 JASPAR yes 118478006
chr1 230463810 230463821 FOSL2 JASPAR yes 36041151
chr1 230463810 230463821 JUNB JASPAR yes 36041152
chr1 230463810 230463821 FOSL2 JASPAR yes 118478007
chr1 230463810 230463821 JUNB JASPAR yes 118478008
chr1 230463810 230463824 JUN JASPAR yes 36041153
chr1 230463810 230463824 JUN JASPAR yes 118478009
chr1 230463811 230463822 BATF JASPAR yes 36041154
chr1 230463811 230463822 BATF JASPAR yes 118478010
chr1 230463813 230463823 EMX1 JASPAR yes 36041155
chr1 230463813 230463823 HOXB3 JASPAR yes 36041156
chr1 230463813 230463823 EMX1 JASPAR yes 118478011
chr1 230463813 230463823 HOXB3 JASPAR yes 118478012
chr1 230463816 230463820 YY1 TRANSFAC yes 36041157
chr1 230463816 230463820 YY1 TRANSFAC yes 118478013
chr1 230463816 230463824 HOXA5 JASPAR yes 36041158
chr1 230463816 230463824 HOXA5 JASPAR yes 118478014
chr1 230463828 230463839 FOSL2 JASPAR yes 36041159
chr1 230463828 230463839 JUNB JASPAR yes 36041160
chr1 230463828 230463839 FOSL2 JASPAR yes 118478015
chr1 230463828 230463839 JUNB JASPAR yes 118478016
chr1 230463829 230463840 FOS JASPAR yes 36041161
chr1 230463829 230463840 FOSL1 JASPAR yes 36041162
chr1 230463829 230463840 JUND JASPAR yes 36041163
chr1 230463829 230463840 NFE2 JASPAR yes 36041164
chr1 230463829 230463840 FOS JASPAR yes 118478017
chr1 230463829 230463840 FOSL1 JASPAR yes 118478018
chr1 230463829 230463840 JUND JASPAR yes 118478019
chr1 230463829 230463840 NFE2 JASPAR yes 118478020
chr1 230463830 230463839 JDP2 JASPAR yes 36041165
chr1 230463830 230463839 JDP2 JASPAR yes 118478021
chr1 230463830 230463841 FOSL2 JASPAR yes 36041166
chr1 230463830 230463841 JUNB JASPAR yes 36041167
chr1 230463830 230463841 FOSL2 JASPAR yes 118478022
chr1 230463830 230463841 JUNB JASPAR yes 118478023
chr1 230463830 230463844 JUN JASPAR yes 36041168
chr1 230463830 230463844 JUN JASPAR yes 118478024
chr1 230463841 230463860 REST JASPAR yes 36041169
chr1 230463841 230463860 REST JASPAR yes 118478025
chr1 230463858 230463868 RELA JASPAR yes 36041170
chr1 230463858 230463868 REL JASPAR yes 36041171
chr1 230463858 230463868 RELA JASPAR yes 118478026
chr1 230463858 230463868 REL JASPAR yes 118478027
chr1 230463858 230463869 NFKB1 JASPAR yes 36041172
chr1 230463858 230463869 NFKB1 JASPAR yes 118478028
chr1 230463858 230463871 NFKB1 JASPAR yes 36041173
chr1 230463858 230463871 NFKB1 JASPAR yes 118478029
chr1 230463859 230463869 NFKB1 JASPAR yes 36041174
chr1 230463859 230463869 RELA JASPAR yes 36041175
chr1 230463859 230463869 NFKB1 JASPAR yes 118478030
chr1 230463859 230463869 RELA JASPAR yes 118478031
chr1 230463859 230463870 NFKB1 JASPAR yes 36041176
chr1 230463859 230463870 NFKB1 JASPAR yes 118478032
chr1 230463876 230463892 RFX2 JASPAR yes 36041177
chr1 230463876 230463892 RFX3 JASPAR yes 36041178
chr1 230463876 230463892 RFX5 JASPAR yes 36041179
chr1 230463876 230463892 RFX2 JASPAR yes 118478033
chr1 230463876 230463892 RFX3 JASPAR yes 118478034
chr1 230463876 230463892 RFX5 JASPAR yes 118478035
chr1 230463877 230463896 RFX2 JASPAR yes 36041180
chr1 230463877 230463896 RFX2 JASPAR yes 118478036
chr1 230463878 230463884 MZF1 JASPAR yes 36041181
chr1 230463878 230463884 MZF1 JASPAR yes 118478037
chr1 230463879 230463894 RFX5 JASPAR yes 36041182
chr1 230463879 230463894 RFX5 JASPAR yes 118478038
chr1 230463915 230463920 H4TF1 TRANSFAC yes 36041183
chr1 230463915 230463920 H4TF1 TRANSFAC yes 118478039
chr1 230463924 230463928 H1TF2 TRANSFAC yes 36041184
chr1 230463924 230463928 NFE TRANSFAC yes 36041185
chr1 230463924 230463928 SRF TRANSFAC yes 36041186
chr1 230463924 230463928 H1TF2 TRANSFAC yes 118478040
chr1 230463924 230463928 NFE TRANSFAC yes 118478041
chr1 230463924 230463928 SRF TRANSFAC yes 118478042
chr1 230463948 230463952 NFE TRANSFAC yes 36041187
chr1 230463948 230463952 NFE TRANSFAC yes 118478043
chr1 230463954 230463958 NFE TRANSFAC yes 36041188
chr1 230463954 230463958 NFE TRANSFAC yes 118478044
SNP sites on vista5498[chr1:230463743-230463957]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 230463792 rs72763860 G A
BCL6B FOS STAT1 STAT3
1016951
chr1 230463843 rs114833402 C T
FOS JUN REST STAT3
1016952
chr1 230463924 rs141495667 C T
FOS H1TF2 NFE SRF STAT3
1016953
chr1 230463934 rs76466709 G A
FOS STAT3
1016954
chr1 230463945 rs78780755 T C
STAT3
1016955
Genes possibly regulated by vista5498[chr1:230463743-230463957]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 230457392 230561475 - PGBD5 ENSG00000177614.5 230561475 0.76 0.98 1938 2482
Expression level of Genes
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miRNAs possibly regulated by vista5498[chr1:230463743-230463957]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results