EnhancerDB
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  3. vista5499[chr1:230559819-230560264]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5499[chr1:230559819-230560264]
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Tissue distribution of vista5499
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Transcription factor that possibly regulate vista5499[chr1:230559819-230560264]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 230560094 230561838 EZH2 UCSC Txn Factor no Conserved 107878838
chr1 230559825 230559845 TP63 JASPAR yes 36046678
chr1 230559825 230559845 TP63 JASPAR yes 118478045
chr1 230559826 230559844 TP53 JASPAR yes 36046679
chr1 230559826 230559844 TP63 JASPAR yes 36046680
chr1 230559826 230559844 TP73 JASPAR yes 36046681
chr1 230559826 230559844 TP53 JASPAR yes 118478046
chr1 230559826 230559844 TP63 JASPAR yes 118478047
chr1 230559826 230559844 TP73 JASPAR yes 118478048
chr1 230559827 230559842 TP53 JASPAR yes 36046682
chr1 230559827 230559842 TP53 JASPAR yes 118478049
chr1 230559851 230559861 FIGLA JASPAR yes 36046683
chr1 230559851 230559861 FIGLA JASPAR yes 118478050
chr1 230559856 230559871 HNF4A JASPAR yes 36046684
chr1 230559856 230559871 HNF4A JASPAR yes 118478051
chr1 230559887 230559898 NFIL3 JASPAR yes 36046685
chr1 230559887 230559898 NFIL3 JASPAR yes 118478052
chr1 230559887 230559901 ATF7 JASPAR yes 36046686
chr1 230559887 230559901 ATF7 JASPAR yes 118478053
chr1 230559888 230559900 DBP JASPAR yes 36046687
chr1 230559888 230559900 HLF JASPAR yes 36046688
chr1 230559888 230559900 JDP2 JASPAR yes 36046689
chr1 230559888 230559900 TEF JASPAR yes 36046690
chr1 230559888 230559900 DBP JASPAR yes 118478054
chr1 230559888 230559900 HLF JASPAR yes 118478055
chr1 230559888 230559900 JDP2 JASPAR yes 118478056
chr1 230559888 230559900 TEF JASPAR yes 118478057
chr1 230559888 230559901 ATF4 JASPAR yes 36046691
chr1 230559888 230559901 ATF4 JASPAR yes 118478058
chr1 230559888 230559903 JUND JASPAR yes 36046692
chr1 230559888 230559903 JUND JASPAR yes 118478059
chr1 230559889 230559902 JUN JASPAR yes 36046693
chr1 230559889 230559902 JUN JASPAR yes 118478060
chr1 230559900 230559914 MTF1 JASPAR yes 36046694
chr1 230559900 230559914 MTF1 JASPAR yes 118478061
chr1 230559920 230559926 NFIC JASPAR yes 36046695
chr1 230559920 230559926 NFIC JASPAR yes 118478062
chr1 230559955 230559971 NFYA JASPAR yes 36046696
chr1 230559955 230559971 NFYA JASPAR yes 118478063
chr1 230559960 230559964 H1TF2 TRANSFAC yes 36046697
chr1 230559960 230559964 NFE TRANSFAC yes 36046698
chr1 230559960 230559964 SRF TRANSFAC yes 36046699
chr1 230559960 230559964 H1TF2 TRANSFAC yes 118478064
chr1 230559960 230559964 NFE TRANSFAC yes 118478065
chr1 230559960 230559964 SRF TRANSFAC yes 118478066
chr1 230559960 230559966 NFYC TRANSFAC yes 36046700
chr1 230559960 230559966 NFYC TRANSFAC yes 118478067
chr1 230559962 230559977 FOXP1 JASPAR yes 36046701
chr1 230559962 230559977 FOXP1 JASPAR yes 118478068
chr1 230559965 230559976 FOXP2 JASPAR yes 36046702
chr1 230559965 230559976 FOXP2 JASPAR yes 118478069
chr1 230559966 230559974 FOXO3 JASPAR yes 36046703
chr1 230559966 230559974 FOXO3 JASPAR yes 118478070
chr1 230559968 230559980 TAL1 JASPAR yes 36046704
chr1 230559968 230559980 TAL1 JASPAR yes 118478071
chr1 230559969 230559982 ZBTB18 JASPAR yes 36046705
chr1 230559969 230559982 ZBTB18 JASPAR yes 118478072
chr1 230559970 230559980 FIGLA JASPAR yes 36046706
chr1 230559970 230559980 MSC JASPAR yes 36046707
chr1 230559970 230559980 MYF6 JASPAR yes 36046708
chr1 230559970 230559980 TFAP4 JASPAR yes 36046709
chr1 230559970 230559980 FIGLA JASPAR yes 118478073
chr1 230559970 230559980 MSC JASPAR yes 118478074
chr1 230559970 230559980 MYF6 JASPAR yes 118478075
chr1 230559970 230559980 TFAP4 JASPAR yes 118478076
chr1 230559970 230559982 TAL1 JASPAR yes 36046710
chr1 230559970 230559982 TAL1 JASPAR yes 118478077
chr1 230559975 230559979 NFE TRANSFAC yes 36046711
chr1 230559975 230559979 NFE TRANSFAC yes 118478078
chr1 230559978 230559998 PPARG JASPAR yes 36046712
chr1 230559978 230559998 PPARG JASPAR yes 118478079
chr1 230559979 230559999 PPARG JASPAR yes 36046713
chr1 230559979 230559999 PPARG JASPAR yes 118478080
chr1 230559980 230559998 ESR2 JASPAR yes 36046714
chr1 230559980 230559998 ESR2 JASPAR yes 118478081
chr1 230559995 230560003 NKX6-1 JASPAR yes 36046715
chr1 230559995 230560003 NKX6-1 JASPAR yes 118478082
chr1 230559999 230560016 BCL6B JASPAR yes 36046716
chr1 230559999 230560016 BCL6B JASPAR yes 118478083
chr1 230560000 230560011 SPDEF JASPAR yes 36046717
chr1 230560000 230560011 SPDEF JASPAR yes 118478084
chr1 230560005 230560015 NFATC3 JASPAR yes 36046718
chr1 230560005 230560015 NFATC3 JASPAR yes 118478085
chr1 230560007 230560014 NFATC2 JASPAR yes 36046719
chr1 230560007 230560014 NFATC2 JASPAR yes 118478086
chr1 230560024 230560028 TEAD2 TRANSFAC yes 36046720
chr1 230560024 230560028 TEAD2 TRANSFAC yes 118478087
chr1 230560024 230560029 TBP TRANSFAC yes 36046721
chr1 230560024 230560029 TBP TRANSFAC yes 118478088
chr1 230560024 230560030 TFIID TRANSFAC yes 36046722
chr1 230560024 230560030 TFIID TRANSFAC yes 118478089
chr1 230560054 230560065 NFKB1 JASPAR yes 118478090
chr1 230560055 230560065 NFKB1 JASPAR yes 118478091
chr1 230560055 230560065 REL JASPAR yes 118478092
chr1 230560072 230560075 MYB TRANSFAC yes 118478093
chr1 230560086 230560096 MAX JASPAR yes 118478094
chr1 230560086 230560106 TP53 JASPAR yes 118478095
chr1 230560106 230560116 SP1 JASPAR yes 118478096
chr1 230560106 230560126 RREB1 JASPAR yes 118478097
chr1 230560108 230560118 ZNF740 JASPAR yes 118478098
chr1 230560126 230560138 MYBL1 JASPAR yes 118478099
chr1 230560131 230560134 MYB TRANSFAC yes 118478100
chr1 230560136 230560147 NFE2L2 JASPAR yes 118478101
chr1 230560168 230560174 ZNF354C JASPAR yes 118478102
chr1 230560223 230560226 MYB TRANSFAC yes 118478103
chr1 230560240 230560260 TP63 JASPAR yes 118478104
chr1 230560241 230560259 TP53 JASPAR yes 118478105
SNP sites on vista5499[chr1:230559819-230560264]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 230559923 rs113684192 C T
NFIC
1017610
chr1 230559936 rs79497591 G A no 1017611
chr1 230560026 rs142321034 A G
TBP TEAD2 TFIID
1017612
chr1 230560063 rs181013404 C T
NFKB1 REL
1017613
chr1 230560182 rs146446934 C T
EZH2
1017614
Genes possibly regulated by vista5499[chr1:230559819-230560264]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 230457392 230561475 - PGBD5 ENSG00000177614.5 230561475 0.76 0.98 1938 98789
Expression level of Genes
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miRNAs possibly regulated by vista5499[chr1:230559819-230560264]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results