EnhancerDB
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  3. vista5504[chr1:230631666-230631872]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5504[chr1:230631666-230631872]
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Tissue distribution of vista5504
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Transcription factor that possibly regulate vista5504[chr1:230631666-230631872]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 230631666 230631682 ZNF143 JASPAR yes 36050192
chr1 230631666 230631682 ZNF143 JASPAR yes 118478434
chr1 230631668 230631674 ZNF354C JASPAR yes 36050193
chr1 230631668 230631674 ZNF354C JASPAR yes 118478435
chr1 230631677 230631695 RARA JASPAR yes 36050194
chr1 230631677 230631695 RARA JASPAR yes 118478436
chr1 230631682 230631700 NFYA JASPAR yes 36050195
chr1 230631682 230631700 NFYA JASPAR yes 118478437
chr1 230631685 230631701 NFYA JASPAR yes 36050196
chr1 230631685 230631701 NFYA JASPAR yes 118478438
chr1 230631688 230631703 NFYB JASPAR yes 36050197
chr1 230631688 230631703 NFYB JASPAR yes 118478439
chr1 230631690 230631695 NFY TRANSFAC yes 36050198
chr1 230631690 230631695 NFY TRANSFAC yes 118478440
chr1 230631694 230631711 RXRA JASPAR yes 36050199
chr1 230631694 230631711 RXRA JASPAR yes 118478441
chr1 230631694 230631715 ZNF263 JASPAR yes 36050200
chr1 230631694 230631715 ZNF263 JASPAR yes 118478442
chr1 230631700 230631706 ETS1 JASPAR yes 36050201
chr1 230631700 230631706 ETS1 JASPAR yes 118478443
chr1 230631707 230631713 MAZ TRANSFAC yes 36050202
chr1 230631707 230631713 MAZ TRANSFAC yes 118478444
chr1 230631725 230631736 NRF1 JASPAR yes 36050203
chr1 230631725 230631736 NRF1 JASPAR yes 118478445
chr1 230631726 230631730 LFA1 TRANSFAC yes 36050204
chr1 230631726 230631730 LFA1 TRANSFAC yes 118478446
chr1 230631761 230631765 H4TF2 TRANSFAC yes 36050205
chr1 230631761 230631765 H4TF2 TRANSFAC yes 118478447
chr1 230631765 230631775 MAX JASPAR yes 36050206
chr1 230631765 230631775 MAX JASPAR yes 118478448
chr1 230631767 230631779 POU3F2 JASPAR yes 36050207
chr1 230631767 230631779 POU3F2 JASPAR yes 118478449
chr1 230631772 230631786 TCF7L2 JASPAR yes 36050208
chr1 230631772 230631786 TCF7L2 JASPAR yes 118478450
chr1 230631776 230631782 TCF1 TRANSFAC yes 36050209
chr1 230631776 230631782 TCF1 TRANSFAC yes 118478451
chr1 230631803 230631813 NFATC3 JASPAR yes 36050210
chr1 230631803 230631813 NFATC3 JASPAR yes 118478452
chr1 230631806 230631816 RELA JASPAR yes 36050211
chr1 230631806 230631816 RELA JASPAR yes 118478453
chr1 230631817 230631831 ATF7 JASPAR yes 36050212
chr1 230631817 230631831 BATF3 JASPAR yes 36050213
chr1 230631817 230631831 ATF7 JASPAR yes 118478454
chr1 230631817 230631831 BATF3 JASPAR yes 118478455
chr1 230631818 230631830 JDP2 JASPAR yes 36050214
chr1 230631818 230631830 JDP2 JASPAR yes 118478456
chr1 230631820 230631825 ATF1 TRANSFAC yes 36050215
chr1 230631820 230631825 ATF1 TRANSFAC yes 118478457
chr1 230631820 230631828 CREB1 JASPAR yes 36050216
chr1 230631820 230631828 CREB1 JASPAR yes 118478458
chr1 230631821 230631833 CREB1 JASPAR yes 36050217
chr1 230631821 230631833 CREB1 JASPAR yes 118478459
chr1 230631822 230631827 ATF1 TRANSFAC yes 36050218
chr1 230631822 230631827 ATF1 TRANSFAC yes 118478460
chr1 230631824 230631835 NRL JASPAR yes 36050219
chr1 230631824 230631835 NRL JASPAR yes 118478461
chr1 230631851 230631856 MYC TRANSFAC yes 36050220
chr1 230631851 230631856 MYC TRANSFAC yes 118478462
SNP sites on vista5504[chr1:230631666-230631872]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista5504[chr1:230631666-230631872]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 230457392 230561475 - PGBD5 ENSG00000177614.5 230561475 0.76 0.98 1938 29809
Expression level of Genes
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miRNAs possibly regulated by vista5504[chr1:230631666-230631872]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results