EnhancerDB
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  3. vista5508[chr1:230724659-230724927]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5508[chr1:230724659-230724927]
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Tissue distribution of vista5508
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Transcription factor that possibly regulate vista5508[chr1:230724659-230724927]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 230724662 230724668 TCF4 TRANSFAC yes 118478610
chr1 230724683 230724697 PAX6 JASPAR yes 118478611
chr1 230724700 230724710 HOXD11 JASPAR yes 118478612
chr1 230724700 230724710 HOXD13 JASPAR yes 118478613
chr1 230724700 230724711 HOXA10 JASPAR yes 118478614
chr1 230724701 230724712 CDX2 JASPAR yes 118478615
chr1 230724704 230724708 TEAD2 TRANSFAC yes 118478616
chr1 230724706 230724709 MYB TRANSFAC yes 118478617
chr1 230724727 230724748 IRF1 JASPAR yes 118478618
chr1 230724728 230724741 POU2F2 JASPAR yes 118478619
chr1 230724728 230724742 POU1F1 JASPAR yes 118478620
chr1 230724729 230724744 PRDM1 JASPAR yes 118478621
chr1 230724729 230724744 STAT2 JASPAR yes 118478622
chr1 230724730 230724744 STAT1 JASPAR yes 118478623
chr1 230724731 230724743 IRF1 JASPAR yes 118478624
chr1 230724731 230724745 IRF7 JASPAR yes 118478625
chr1 230724731 230724745 IRF8 JASPAR yes 118478626
chr1 230724731 230724746 IRF9 JASPAR yes 118478627
chr1 230724736 230724740 YY1 TRANSFAC yes 118478628
chr1 230724755 230724759 YY1 TRANSFAC yes 118478629
chr1 230724755 230724766 CEBPB JASPAR yes 118478630
chr1 230724756 230724764 FEV JASPAR yes 118478631
chr1 230724774 230724784 MAX JASPAR yes 118478632
chr1 230724787 230724793 LEF1 TRANSFAC yes 118478633
chr1 230724787 230724793 SOX10 JASPAR yes 118478634
chr1 230724788 230724797 SRY JASPAR yes 118478635
chr1 230724792 230724802 ALX3 JASPAR yes 118478636
chr1 230724792 230724802 GSX2 JASPAR yes 118478637
chr1 230724792 230724802 MIXL1 JASPAR yes 118478638
chr1 230724792 230724802 MNX1 JASPAR yes 118478639
chr1 230724793 230724801 ISX JASPAR yes 118478640
chr1 230724793 230724801 LMX1A JASPAR yes 118478641
chr1 230724793 230724801 LMX1B JASPAR yes 118478642
chr1 230724793 230724801 NKX6-1 JASPAR yes 118478643
chr1 230724793 230724801 NKX6-2 JASPAR yes 118478644
chr1 230724793 230724801 PRRX1 JASPAR yes 118478645
chr1 230724793 230724801 RAX2 JASPAR yes 118478646
chr1 230724793 230724801 SHOX JASPAR yes 118478647
chr1 230724793 230724801 UNCX JASPAR yes 118478648
chr1 230724793 230724801 VAX1 JASPAR yes 118478649
chr1 230724812 230724832 RREB1 JASPAR yes 118478650
chr1 230724817 230724837 RREB1 JASPAR yes 118478651
chr1 230724818 230724830 ZBTB7C JASPAR yes 118478652
chr1 230724818 230724838 RREB1 JASPAR yes 118478653
chr1 230724822 230724842 RREB1 JASPAR yes 118478654
chr1 230724839 230724847 FOXO3 JASPAR yes 118478655
chr1 230724856 230724870 RXRB JASPAR yes 118478656
chr1 230724856 230724870 RXRG JASPAR yes 118478657
chr1 230724858 230724862 ESR1 TRANSFAC yes 118478658
chr1 230724865 230724879 E2F7 JASPAR yes 118478659
chr1 230724871 230724877 NFIC JASPAR yes 118478660
chr1 230724872 230724886 JUN JASPAR yes 118478661
chr1 230724875 230724886 FOSL2 JASPAR yes 118478662
chr1 230724875 230724886 JUNB JASPAR yes 118478663
chr1 230724875 230724889 PAX6 JASPAR yes 118478664
chr1 230724876 230724887 FOS JASPAR yes 118478665
chr1 230724876 230724887 JUND JASPAR yes 118478666
chr1 230724876 230724887 NFE2 JASPAR yes 118478667
chr1 230724877 230724886 JDP2 JASPAR yes 118478668
chr1 230724899 230724914 HSF1 JASPAR yes 118478669
chr1 230724909 230724914 GATA2 JASPAR yes 118478670
chr1 230724910 230724923 POU3F3 JASPAR yes 118478671
SNP sites on vista5508[chr1:230724659-230724927]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 230724783 rs34664288 GT G
MAX
1018817
chr1 230724824 rs570700865 C A
RREB1 ZBTB7C
1018818
chr1 230724842 rs74884370 T C
FOXO3 RREB1
1018819
chr1 230724903 rs148682076 G A
HSF1
1018820
Genes possibly regulated by vista5508[chr1:230724659-230724927]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 230778235 230829728 + COG2 ENSG00000135775.9 230778235 0.6 0.99 1939 46692
Expression level of Genes
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miRNAs possibly regulated by vista5508[chr1:230724659-230724927]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results