EnhancerDB
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  3. vista5512[chr1:230943804-230944036]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5512[chr1:230943804-230944036]
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Tissue distribution of vista5512
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Transcription factor that possibly regulate vista5512[chr1:230943804-230944036]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 230943811 230943816 ETS2 TRANSFAC yes 36063579
chr1 230943811 230943816 ETS2 TRANSFAC yes 118478932
chr1 230943823 230943839 SOX8 JASPAR yes 36063580
chr1 230943823 230943839 SOX8 JASPAR yes 118478933
chr1 230943827 230943844 NR3C1 JASPAR yes 36063581
chr1 230943827 230943844 NR3C2 JASPAR yes 36063582
chr1 230943827 230943844 NR3C1 JASPAR yes 118478934
chr1 230943827 230943844 NR3C2 JASPAR yes 118478935
chr1 230943835 230943846 FOXP2 JASPAR yes 36063583
chr1 230943835 230943846 FOXP2 JASPAR yes 118478936
chr1 230943837 230943845 FOXO3 JASPAR yes 36063584
chr1 230943837 230943845 FOXO3 JASPAR yes 118478937
chr1 230943856 230943877 REST JASPAR yes 36063585
chr1 230943856 230943877 REST JASPAR yes 118478938
chr1 230943864 230943868 H1TF2 TRANSFAC yes 36063586
chr1 230943864 230943868 NFE TRANSFAC yes 36063587
chr1 230943864 230943868 SRF TRANSFAC yes 36063588
chr1 230943864 230943868 H1TF2 TRANSFAC yes 118478939
chr1 230943864 230943868 NFE TRANSFAC yes 118478940
chr1 230943864 230943868 SRF TRANSFAC yes 118478941
chr1 230943865 230943878 HSF1 JASPAR yes 36063589
chr1 230943865 230943878 HSF2 JASPAR yes 36063590
chr1 230943865 230943878 HSF1 JASPAR yes 118478942
chr1 230943865 230943878 HSF2 JASPAR yes 118478943
chr1 230943879 230943883 H1TF2 TRANSFAC yes 36063591
chr1 230943879 230943883 NFE TRANSFAC yes 36063592
chr1 230943879 230943883 SRF TRANSFAC yes 36063593
chr1 230943879 230943883 H1TF2 TRANSFAC yes 118478944
chr1 230943879 230943883 NFE TRANSFAC yes 118478945
chr1 230943879 230943883 SRF TRANSFAC yes 118478946
chr1 230943896 230943911 STAT1 JASPAR yes 36063594
chr1 230943896 230943911 STAT1 JASPAR yes 118478947
chr1 230943898 230943909 STAT1 JASPAR yes 36063595
chr1 230943898 230943909 STAT3 JASPAR yes 36063596
chr1 230943898 230943909 STAT1 JASPAR yes 118478948
chr1 230943898 230943909 STAT3 JASPAR yes 118478949
chr1 230943904 230943919 STAT2 JASPAR yes 36063597
chr1 230943904 230943919 STAT2 JASPAR yes 118478950
chr1 230943947 230943962 AR JASPAR yes 36063598
chr1 230943947 230943962 AR JASPAR yes 118478951
chr1 230943966 230943970 NFE TRANSFAC yes 36063599
chr1 230943966 230943970 NFE TRANSFAC yes 118478952
chr1 230943994 230943998 YY1 TRANSFAC yes 36063600
chr1 230943994 230943998 YY1 TRANSFAC yes 118478953
chr1 230943996 230944006 HOXA13 JASPAR yes 36063601
chr1 230943996 230944006 HOXB13 JASPAR yes 36063602
chr1 230943996 230944006 HOXD13 JASPAR yes 36063603
chr1 230943996 230944006 HOXA13 JASPAR yes 118478954
chr1 230943996 230944006 HOXB13 JASPAR yes 118478955
chr1 230943996 230944006 HOXD13 JASPAR yes 118478956
chr1 230943996 230944007 HOXA10 JASPAR yes 36063604
chr1 230943996 230944007 HOXA10 JASPAR yes 118478957
chr1 230943997 230944006 CDX1 JASPAR yes 36063605
chr1 230943997 230944006 CDX1 JASPAR yes 118478958
chr1 230944029 230944047 RARA JASPAR yes 36063606
chr1 230944029 230944047 RARA JASPAR yes 118478959
chr1 230944034 230944052 NFYA JASPAR yes 36063607
chr1 230944034 230944052 NFYA JASPAR yes 118478960
SNP sites on vista5512[chr1:230943804-230944036]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 230943819 rs147939761 G A no 1019804
Genes possibly regulated by vista5512[chr1:230943804-230944036]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 230838269 230850043 - AGT ENSG00000135744.7 230850043 1.0 1.0 1940 6239
chr1 230883130 230937749 + CAPN9 ENSG00000135773.8 230883130 0.96 1.0 1941 39326
chr1 230972865 231005335 - C1orf198 ENSG00000119280.12 231005335 0.8 1.0 1942 38701
Expression level of Genes
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miRNAs possibly regulated by vista5512[chr1:230943804-230944036]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results