EnhancerDB
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  3. vista5516[chr1:231036878-231036937]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5516[chr1:231036878-231036937]
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Tissue distribution of vista5516
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Transcription factor that possibly regulate vista5516[chr1:231036878-231036937]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 231036880 231036895 ZIC3 JASPAR yes 36069880
chr1 231036880 231036895 ZIC4 JASPAR yes 36069881
chr1 231036880 231036895 ZIC3 JASPAR yes 118479038
chr1 231036880 231036895 ZIC4 JASPAR yes 118479039
chr1 231036894 231036898 NFE TRANSFAC yes 36069882
chr1 231036894 231036898 NFE TRANSFAC yes 118479040
chr1 231036913 231036921 TEAD3 JASPAR yes 36069883
chr1 231036913 231036921 TEAD3 JASPAR yes 118479041
chr1 231036921 231036936 SOX21 JASPAR yes 36069884
chr1 231036921 231036936 SOX21 JASPAR yes 118479042
chr1 231036928 231036943 FOXA1 JASPAR yes 36069885
chr1 231036928 231036943 FOXA1 JASPAR yes 118479043
chr1 231036929 231036944 FOXP1 JASPAR yes 36069886
chr1 231036929 231036944 FOXP1 JASPAR yes 118479044
chr1 231036930 231036941 FOXP2 JASPAR yes 36069887
chr1 231036930 231036941 FOXP2 JASPAR yes 118479045
chr1 231036930 231036942 FOXC2 JASPAR yes 36069888
chr1 231036930 231036942 FOXC2 JASPAR yes 118479046
chr1 231036930 231036944 FOXF2 JASPAR yes 36069889
chr1 231036930 231036944 FOXF2 JASPAR yes 118479047
chr1 231036931 231036939 FOXD1 JASPAR yes 36069890
chr1 231036931 231036939 FOXG1 JASPAR yes 36069891
chr1 231036931 231036939 FOXO3 JASPAR yes 36069892
chr1 231036931 231036939 FOXD1 JASPAR yes 118479048
chr1 231036931 231036939 FOXG1 JASPAR yes 118479049
chr1 231036931 231036939 FOXO3 JASPAR yes 118479050
chr1 231036931 231036942 FOXC1 JASPAR yes 36069893
chr1 231036931 231036942 FOXC1 JASPAR yes 118479051
chr1 231036932 231036939 FOXD2 JASPAR yes 36069894
chr1 231036932 231036939 FOXI1 JASPAR yes 36069895
chr1 231036932 231036939 FOXL1 JASPAR yes 36069896
chr1 231036932 231036939 FOXO4 JASPAR yes 36069897
chr1 231036932 231036939 FOXO6 JASPAR yes 36069898
chr1 231036932 231036939 FOXP3 JASPAR yes 36069899
chr1 231036932 231036939 FOXD2 JASPAR yes 118479052
chr1 231036932 231036939 FOXI1 JASPAR yes 118479053
chr1 231036932 231036939 FOXL1 JASPAR yes 118479054
chr1 231036932 231036939 FOXO4 JASPAR yes 118479055
chr1 231036932 231036939 FOXO6 JASPAR yes 118479056
chr1 231036932 231036939 FOXP3 JASPAR yes 118479057
chr1 231036932 231036940 FOXO3 JASPAR yes 36069900
chr1 231036932 231036940 FOXO3 JASPAR yes 118479058
chr1 231036932 231036943 FOXA1 JASPAR yes 36069901
chr1 231036932 231036943 FOXA1 JASPAR yes 118479059
SNP sites on vista5516[chr1:231036878-231036937]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista5516[chr1:231036878-231036937]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 230972865 231005335 - C1orf198 ENSG00000119280.12 231005335 0.8 1.0 1942 68457
chr1 231041989 231114621 - TTC13 ENSG00000143643.8 231114621 0.67 0.98 1943 22316
chr1 231114727 231136341 + ARV1 ENSG00000173409.9 231114727 0.69 0.95 1944 22210
Expression level of Genes
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miRNAs possibly regulated by vista5516[chr1:231036878-231036937]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results