EnhancerDB
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  3. vista5518[chr1:231083969-231084208]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5518[chr1:231083969-231084208]
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Tissue distribution of vista5518
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Transcription factor that possibly regulate vista5518[chr1:231083969-231084208]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 231083958 231083971 ZBTB18 JASPAR yes 36071156
chr1 231083958 231083971 ZBTB18 JASPAR yes 118479128
chr1 231083959 231083969 MAX JASPAR yes 36071157
chr1 231083959 231083969 MAX JASPAR yes 118479129
chr1 231083963 231083973 MAX JASPAR yes 36071158
chr1 231083963 231083973 MAX JASPAR yes 118479130
chr1 231083974 231083985 FOXB1 JASPAR yes 36071159
chr1 231083974 231083985 FOXB1 JASPAR yes 118479131
chr1 231083985 231083996 DMRT3 JASPAR yes 36071160
chr1 231083985 231083996 DMRT3 JASPAR yes 118479132
chr1 231083996 231084012 SOX4 JASPAR yes 36071161
chr1 231083996 231084012 SOX4 JASPAR yes 118479133
chr1 231084023 231084030 SPI1 JASPAR yes 36071162
chr1 231084023 231084030 SPI1 JASPAR yes 118479134
chr1 231084048 231084052 YY1 TRANSFAC yes 36071163
chr1 231084048 231084052 YY1 TRANSFAC yes 118479135
chr1 231084065 231084069 YY1 TRANSFAC yes 36071164
chr1 231084065 231084069 YY1 TRANSFAC yes 118479136
chr1 231084070 231084091 IRF1 JASPAR yes 36071165
chr1 231084070 231084091 IRF1 JASPAR yes 118479137
chr1 231084074 231084080 TBP TRANSFAC yes 36071166
chr1 231084074 231084080 TBP TRANSFAC yes 118479138
chr1 231084074 231084089 PRDM1 JASPAR yes 36071167
chr1 231084074 231084089 PRDM1 JASPAR yes 118479139
chr1 231084098 231084108 NFIA JASPAR yes 36071168
chr1 231084098 231084108 NFIA JASPAR yes 118479140
chr1 231084100 231084106 NFIC JASPAR yes 36071169
chr1 231084100 231084106 NFIC JASPAR yes 118479141
chr1 231084101 231084111 ESX1 JASPAR yes 36071170
chr1 231084101 231084111 GBX1 JASPAR yes 36071171
chr1 231084101 231084111 GBX2 JASPAR yes 36071172
chr1 231084101 231084111 GSX1 JASPAR yes 36071173
chr1 231084101 231084111 GSX2 JASPAR yes 36071174
chr1 231084101 231084111 HESX1 JASPAR yes 36071175
chr1 231084101 231084111 LBX2 JASPAR yes 36071176
chr1 231084101 231084111 LHX2 JASPAR yes 36071177
chr1 231084101 231084111 MNX1 JASPAR yes 36071178
chr1 231084101 231084111 RAX JASPAR yes 36071179
chr1 231084101 231084111 ESX1 JASPAR yes 118479142
chr1 231084101 231084111 GBX1 JASPAR yes 118479143
chr1 231084101 231084111 GBX2 JASPAR yes 118479144
chr1 231084101 231084111 GSX1 JASPAR yes 118479145
chr1 231084101 231084111 GSX2 JASPAR yes 118479146
chr1 231084101 231084111 HESX1 JASPAR yes 118479147
chr1 231084101 231084111 LBX2 JASPAR yes 118479148
chr1 231084101 231084111 LHX2 JASPAR yes 118479149
chr1 231084101 231084111 MNX1 JASPAR yes 118479150
chr1 231084101 231084111 RAX JASPAR yes 118479151
chr1 231084102 231084106 H1TF2 TRANSFAC yes 36071180
chr1 231084102 231084106 NFE TRANSFAC yes 36071181
chr1 231084102 231084106 SRF TRANSFAC yes 36071182
chr1 231084102 231084106 H1TF2 TRANSFAC yes 118479152
chr1 231084102 231084106 NFE TRANSFAC yes 118479153
chr1 231084102 231084106 SRF TRANSFAC yes 118479154
chr1 231084102 231084110 BARX1 JASPAR yes 36071183
chr1 231084102 231084110 BSX JASPAR yes 36071184
chr1 231084102 231084110 DLX6 JASPAR yes 36071185
chr1 231084102 231084110 ISX JASPAR yes 36071186
chr1 231084102 231084110 LBX1 JASPAR yes 36071187
chr1 231084102 231084110 LHX9 JASPAR yes 36071188
chr1 231084102 231084110 MSX1 JASPAR yes 36071189
chr1 231084102 231084110 MSX2 JASPAR yes 36071190
chr1 231084102 231084110 NKX6-2 JASPAR yes 36071191
chr1 231084102 231084110 PRRX1 JASPAR yes 36071192
chr1 231084102 231084110 RAX2 JASPAR yes 36071193
chr1 231084102 231084110 SHOX JASPAR yes 36071194
chr1 231084102 231084110 UNCX JASPAR yes 36071195
chr1 231084102 231084110 BARX1 JASPAR yes 118479155
chr1 231084102 231084110 BSX JASPAR yes 118479156
chr1 231084102 231084110 DLX6 JASPAR yes 118479157
chr1 231084102 231084110 ISX JASPAR yes 118479158
chr1 231084102 231084110 LBX1 JASPAR yes 118479159
chr1 231084102 231084110 LHX9 JASPAR yes 118479160
chr1 231084102 231084110 MSX1 JASPAR yes 118479161
chr1 231084102 231084110 MSX2 JASPAR yes 118479162
chr1 231084102 231084110 NKX6-2 JASPAR yes 118479163
chr1 231084102 231084110 PRRX1 JASPAR yes 118479164
chr1 231084102 231084110 RAX2 JASPAR yes 118479165
chr1 231084102 231084110 SHOX JASPAR yes 118479166
chr1 231084102 231084110 UNCX JASPAR yes 118479167
chr1 231084103 231084113 PAX3 JASPAR yes 36071196
chr1 231084103 231084113 PAX3 JASPAR yes 118479168
chr1 231084141 231084156 MEF2C JASPAR yes 36071197
chr1 231084141 231084156 MEF2C JASPAR yes 118479169
chr1 231084141 231084162 IRF1 JASPAR yes 36071198
chr1 231084141 231084162 IRF1 JASPAR yes 118479170
chr1 231084142 231084157 FOXP1 JASPAR yes 36071199
chr1 231084142 231084157 FOXP1 JASPAR yes 118479171
chr1 231084142 231084163 IRF1 JASPAR yes 36071200
chr1 231084142 231084163 IRF1 JASPAR yes 118479172
chr1 231084143 231084158 FOXP1 JASPAR yes 36071201
chr1 231084143 231084158 FOXP1 JASPAR yes 118479173
chr1 231084144 231084159 FOXP1 JASPAR yes 36071202
chr1 231084144 231084159 FOXP1 JASPAR yes 118479174
chr1 231084145 231084160 FOXP1 JASPAR yes 36071203
chr1 231084145 231084160 FOXP1 JASPAR yes 118479175
chr1 231084146 231084161 FOXP1 JASPAR yes 36071204
chr1 231084146 231084161 FOXP1 JASPAR yes 118479176
chr1 231084146 231084167 IRF1 JASPAR yes 36071205
chr1 231084146 231084167 IRF1 JASPAR yes 118479177
chr1 231084147 231084162 FOXP1 JASPAR yes 36071206
chr1 231084147 231084162 FOXP1 JASPAR yes 118479178
chr1 231084147 231084168 IRF1 JASPAR yes 36071207
chr1 231084147 231084168 IRF1 JASPAR yes 118479179
chr1 231084148 231084163 FOXP1 JASPAR yes 36071208
chr1 231084148 231084163 FOXP1 JASPAR yes 118479180
chr1 231084149 231084164 FOXP1 JASPAR yes 36071209
chr1 231084149 231084164 FOXP1 JASPAR yes 118479181
chr1 231084164 231084167 MYB TRANSFAC yes 36071210
chr1 231084164 231084167 MYB TRANSFAC yes 118479182
chr1 231084190 231084205 HNF1A JASPAR yes 36071211
chr1 231084190 231084205 HNF1A JASPAR yes 118479183
chr1 231084191 231084204 HNF1B JASPAR yes 36071212
chr1 231084191 231084204 HNF1B JASPAR yes 118479184
chr1 231084191 231084205 JUN JASPAR yes 36071213
chr1 231084191 231084205 JUN JASPAR yes 118479185
chr1 231084197 231084201 YY1 TRANSFAC yes 36071214
chr1 231084197 231084201 YY1 TRANSFAC yes 118479186
SNP sites on vista5518[chr1:231083969-231084208]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 231084063 rs113473495 G A no 1020727
chr1 231084075 rs397778795 T TA
IRF1 PRDM1 TBP
1020728
chr1 231084075 rs5781611 T TA
IRF1 PRDM1 TBP
1020729
chr1 231084146 rs573342115 C CAAAAAA
FOXP1 IRF1 MEF2C
1020730
chr1 231084180 rs12564991 T G no 1020731
Genes possibly regulated by vista5518[chr1:231083969-231084208]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 230972865 231005335 - C1orf198 ENSG00000119280.12 231005335 0.8 1.0 1942 21366
chr1 231041989 231114621 - TTC13 ENSG00000143643.8 231114621 0.67 0.98 1943 69587
chr1 231114727 231136341 + ARV1 ENSG00000173409.9 231114727 0.69 0.95 1944 69481
chr1 231154704 231175992 - FAM89A ENSG00000182118.5 231175992 0.71 0.99 1945 8216
Expression level of Genes
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miRNAs possibly regulated by vista5518[chr1:231083969-231084208]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results