EnhancerDB
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  3. vista552[chr1:17425016-17425355]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista552[chr1:17425016-17425355]
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Tissue distribution of vista552
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Transcription factor that possibly regulate vista552[chr1:17425016-17425355]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 17425011 17425021 MYF6 JASPAR yes 27068948
chr1 17425011 17425021 MYF6 JASPAR yes 118240191
chr1 17425019 17425024 ETS2 TRANSFAC yes 27068949
chr1 17425019 17425024 ETS2 TRANSFAC yes 118240192
chr1 17425039 17425049 NHLH1 JASPAR yes 27068950
chr1 17425039 17425049 NHLH1 JASPAR yes 118240193
chr1 17425042 17425057 TFAP2A JASPAR yes 27068951
chr1 17425042 17425057 TFAP2C JASPAR yes 27068952
chr1 17425042 17425057 TFAP2A JASPAR yes 118240194
chr1 17425042 17425057 TFAP2C JASPAR yes 118240195
chr1 17425045 17425056 TFAP2A JASPAR yes 27068953
chr1 17425045 17425056 TFAP2B JASPAR yes 27068954
chr1 17425045 17425056 TFAP2C JASPAR yes 27068955
chr1 17425045 17425056 TFAP2A JASPAR yes 118240196
chr1 17425045 17425056 TFAP2B JASPAR yes 118240197
chr1 17425045 17425056 TFAP2C JASPAR yes 118240198
chr1 17425076 17425081 H4TF1 TRANSFAC yes 27068956
chr1 17425076 17425081 H4TF1 TRANSFAC yes 118240199
chr1 17425076 17425088 ELF1 JASPAR yes 27068957
chr1 17425076 17425088 ELF1 JASPAR yes 118240200
chr1 17425076 17425089 ELF1 JASPAR yes 27068958
chr1 17425076 17425089 ELF1 JASPAR yes 118240201
chr1 17425076 17425090 SPIC JASPAR yes 27068959
chr1 17425076 17425090 SPIC JASPAR yes 118240202
chr1 17425077 17425085 FEV JASPAR yes 27068960
chr1 17425077 17425085 FEV JASPAR yes 118240203
chr1 17425101 17425116 STAT2 JASPAR yes 27068961
chr1 17425101 17425116 STAT2 JASPAR yes 118240204
chr1 17425102 17425116 STAT1 JASPAR yes 27068962
chr1 17425102 17425116 STAT1 JASPAR yes 118240205
chr1 17425103 17425115 IRF1 JASPAR yes 27068963
chr1 17425103 17425115 IRF1 JASPAR yes 118240206
chr1 17425111 17425122 FLI1 JASPAR yes 27068964
chr1 17425111 17425122 FLI1 JASPAR yes 118240207
chr1 17425112 17425122 GABPA JASPAR yes 27068965
chr1 17425112 17425122 GABPA JASPAR yes 118240208
chr1 17425113 17425121 EHF JASPAR yes 27068966
chr1 17425113 17425121 EHF JASPAR yes 118240209
chr1 17425120 17425130 CEBPB JASPAR yes 27068967
chr1 17425120 17425130 CEBPD JASPAR yes 27068968
chr1 17425120 17425130 CEBPE JASPAR yes 27068969
chr1 17425120 17425130 CEBPG JASPAR yes 27068970
chr1 17425120 17425130 CEBPB JASPAR yes 118240210
chr1 17425120 17425130 CEBPD JASPAR yes 118240211
chr1 17425120 17425130 CEBPE JASPAR yes 118240212
chr1 17425120 17425130 CEBPG JASPAR yes 118240213
chr1 17425129 17425138 HIC2 JASPAR yes 27068971
chr1 17425129 17425138 HIC2 JASPAR yes 118240214
chr1 17425132 17425136 LFA1 TRANSFAC yes 27068972
chr1 17425132 17425136 LFA1 TRANSFAC yes 118240215
chr1 17425135 17425139 YY1 TRANSFAC yes 27068973
chr1 17425135 17425139 YY1 TRANSFAC yes 118240216
chr1 17425187 17425190 MYB TRANSFAC yes 27068974
chr1 17425187 17425190 MYB TRANSFAC yes 118240217
chr1 17425196 17425213 PAX1 JASPAR yes 27068975
chr1 17425196 17425213 PAX9 JASPAR yes 27068976
chr1 17425196 17425213 PAX1 JASPAR yes 118240218
chr1 17425196 17425213 PAX9 JASPAR yes 118240219
chr1 17425197 17425210 NR2F1 JASPAR yes 27068977
chr1 17425197 17425210 NR2F1 JASPAR yes 118240220
chr1 17425199 17425210 NFE2 JASPAR yes 27068978
chr1 17425199 17425210 NFE2 JASPAR yes 118240221
chr1 17425201 17425215 RXRB JASPAR yes 27068979
chr1 17425201 17425215 RXRG JASPAR yes 27068980
chr1 17425201 17425215 RXRB JASPAR yes 118240222
chr1 17425201 17425215 RXRG JASPAR yes 118240223
chr1 17425204 17425217 NR2F1 JASPAR yes 27068981
chr1 17425204 17425217 NR2F1 JASPAR yes 118240224
chr1 17425212 17425216 NFE TRANSFAC yes 27068982
chr1 17425212 17425216 NFE TRANSFAC yes 118240225
chr1 17425215 17425221 MZF1 JASPAR yes 27068983
chr1 17425215 17425221 MZF1 JASPAR yes 118240226
chr1 17425215 17425231 ZNF143 JASPAR yes 27068984
chr1 17425215 17425231 ZNF143 JASPAR yes 118240227
chr1 17425219 17425230 FOXH1 JASPAR yes 27068985
chr1 17425219 17425230 FOXH1 JASPAR yes 118240228
chr1 17425220 17425228 RHOXF1 JASPAR yes 27068986
chr1 17425220 17425228 RHOXF1 JASPAR yes 118240229
chr1 17425223 17425229 ZNF354C JASPAR yes 27068987
chr1 17425223 17425229 ZNF354C JASPAR yes 118240230
chr1 17425231 17425249 RARA JASPAR yes 27068988
chr1 17425231 17425249 RARA JASPAR yes 118240231
chr1 17425232 17425243 ESRRB JASPAR yes 27068989
chr1 17425232 17425243 ESRRB JASPAR yes 118240232
chr1 17425237 17425258 ZNF263 JASPAR yes 27068990
chr1 17425237 17425258 ZNF263 JASPAR yes 118240233
chr1 17425263 17425268 SP1 TRANSFAC yes 27068991
chr1 17425263 17425268 SP1 TRANSFAC yes 118240234
chr1 17425263 17425275 GLI2 JASPAR yes 27068992
chr1 17425263 17425275 GLI2 JASPAR yes 118240235
chr1 17425280 17425294 EBF1 JASPAR yes 27068993
chr1 17425280 17425294 EBF1 JASPAR yes 118240236
chr1 17425281 17425292 EBF1 JASPAR yes 27068994
chr1 17425281 17425292 EBF1 JASPAR yes 118240237
chr1 17425282 17425293 EBF1 JASPAR yes 27068995
chr1 17425282 17425293 EBF1 JASPAR yes 118240238
chr1 17425314 17425318 H1TF2 TRANSFAC yes 27068996
chr1 17425314 17425318 NFE TRANSFAC yes 27068997
chr1 17425314 17425318 SRF TRANSFAC yes 27068998
chr1 17425314 17425318 H1TF2 TRANSFAC yes 118240239
chr1 17425314 17425318 NFE TRANSFAC yes 118240240
chr1 17425314 17425318 SRF TRANSFAC yes 118240241
chr1 17425326 17425334 LBX1 JASPAR yes 27068999
chr1 17425326 17425334 LBX1 JASPAR yes 118240242
chr1 17425327 17425330 MYB TRANSFAC yes 27069000
chr1 17425327 17425330 MYB TRANSFAC yes 118240243
chr1 17425347 17425357 GCM2 JASPAR yes 27069001
chr1 17425347 17425357 GCM2 JASPAR yes 118240244
chr1 17425347 17425358 GCM1 JASPAR yes 27069002
chr1 17425347 17425358 GCM1 JASPAR yes 118240245
SNP sites on vista552[chr1:17425016-17425355]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 17425067 rs2746506 T C no 115614
chr1 17425077 rs2235913 G A
ELF1 FEV H4TF1 SPIC
115615
chr1 17425127 rs115427874 A G
CEBPB CEBPD CEBPE CEBPG
115616
chr1 17425246 rs546349914 C T
RARA ZNF263
115617
chr1 17425276 rs553191438 T C no 115618
chr1 17425315 rs116066290 C G
H1TF2 NFE SRF
115619
Genes possibly regulated by vista552[chr1:17425016-17425355]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 17312453 17338423 - ATP13A2 ENSG00000159363.13 17338423 0.65 1.0 239 13407
chr1 17345217 17380665 - SDHB ENSG00000117118.5 17380665 0.78 0.99 240 55649
chr1 17393256 17445948 - PADI2 ENSG00000117115.8 17445948 0.86 1.0 241 79407
Expression level of Genes
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miRNAs possibly regulated by vista552[chr1:17425016-17425355]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results