EnhancerDB
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  3. vista5521[chr1:231347338-231347496]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5521[chr1:231347338-231347496]
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Tissue distribution of vista5521
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Transcription factor that possibly regulate vista5521[chr1:231347338-231347496]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 231347036 231347456 CTCF UCSC Txn Factor no Conserved 107879221
chr1 231347095 231347373 RAD21 UCSC Txn Factor no Conserved 107879234
chr1 231347111 231347382 SMC3 UCSC Txn Factor no Conserved 107879242
chr1 231347131 231347433 RUNX3 UCSC Txn Factor no Conserved 107879257
chr1 231347153 231347559 ZNF263 UCSC Txn Factor no Conserved 107879264
chr1 231347190 231347450 TCF12 UCSC Txn Factor no Conserved 107879272
chr1 231347329 231347342 NFKB2 JASPAR yes 36083299
chr1 231347329 231347342 NFKB2 JASPAR yes 118479239
chr1 231347330 231347343 NFKB2 JASPAR yes 36083300
chr1 231347330 231347343 NFKB2 JASPAR yes 118479240
chr1 231347331 231347342 NFKB1 JASPAR yes 36083301
chr1 231347331 231347342 NFKB1 JASPAR yes 118479241
chr1 231347348 231347358 FLI1 JASPAR yes 36083302
chr1 231347348 231347358 FLI1 JASPAR yes 118479242
chr1 231347350 231347356 ETS1 JASPAR yes 36083303
chr1 231347350 231347356 ETS1 JASPAR yes 118479243
chr1 231347353 231347365 PKNOX2 JASPAR yes 36083304
chr1 231347353 231347365 PKNOX2 JASPAR yes 118479244
chr1 231347353 231347366 ZBTB18 JASPAR yes 36083305
chr1 231347353 231347366 ZBTB18 JASPAR yes 118479245
chr1 231347354 231347364 FIGLA JASPAR yes 36083306
chr1 231347354 231347364 ID4 JASPAR yes 36083307
chr1 231347354 231347364 MSC JASPAR yes 36083308
chr1 231347354 231347364 MYF6 JASPAR yes 36083309
chr1 231347354 231347364 TCF3 JASPAR yes 36083310
chr1 231347354 231347364 TCF4 JASPAR yes 36083311
chr1 231347354 231347364 FIGLA JASPAR yes 118479246
chr1 231347354 231347364 ID4 JASPAR yes 118479247
chr1 231347354 231347364 MSC JASPAR yes 118479248
chr1 231347354 231347364 MYF6 JASPAR yes 118479249
chr1 231347354 231347364 TCF3 JASPAR yes 118479250
chr1 231347354 231347364 TCF4 JASPAR yes 118479251
chr1 231347355 231347364 SNAI2 JASPAR yes 36083312
chr1 231347355 231347364 SNAI2 JASPAR yes 118479252
chr1 231347356 231347361 USF2 TRANSFAC yes 36083313
chr1 231347356 231347361 USF2 TRANSFAC yes 118479253
chr1 231347359 231347363 NFE TRANSFAC yes 36083314
chr1 231347359 231347363 NFE TRANSFAC yes 118479254
chr1 231347367 231347379 ZBTB7A JASPAR yes 36083315
chr1 231347367 231347379 ZBTB7A JASPAR yes 118479255
chr1 231347368 231347373 SP1 TRANSFAC yes 36083316
chr1 231347368 231347373 SP1 TRANSFAC yes 118479256
chr1 231347368 231347380 ZBTB7B JASPAR yes 36083317
chr1 231347368 231347380 ZBTB7C JASPAR yes 36083318
chr1 231347368 231347380 ZBTB7B JASPAR yes 118479257
chr1 231347368 231347380 ZBTB7C JASPAR yes 118479258
chr1 231347387 231347397 REL JASPAR yes 36083319
chr1 231347387 231347397 REL JASPAR yes 118479259
chr1 231347388 231347398 NFKB1 JASPAR yes 36083320
chr1 231347388 231347398 NFKB1 JASPAR yes 118479260
chr1 231347389 231347400 ELK4 JASPAR yes 36083321
chr1 231347389 231347400 FLI1 JASPAR yes 36083322
chr1 231347389 231347400 ELK4 JASPAR yes 118479261
chr1 231347389 231347400 FLI1 JASPAR yes 118479262
chr1 231347390 231347400 ERF JASPAR yes 36083323
chr1 231347390 231347400 ERG JASPAR yes 36083324
chr1 231347390 231347400 ETS1 JASPAR yes 36083325
chr1 231347390 231347400 ETV3 JASPAR yes 36083326
chr1 231347390 231347400 FEV JASPAR yes 36083327
chr1 231347390 231347400 FLI1 JASPAR yes 36083328
chr1 231347390 231347400 GABPA JASPAR yes 36083329
chr1 231347390 231347400 ERF JASPAR yes 118479263
chr1 231347390 231347400 ERG JASPAR yes 118479264
chr1 231347390 231347400 ETS1 JASPAR yes 118479265
chr1 231347390 231347400 ETV3 JASPAR yes 118479266
chr1 231347390 231347400 FEV JASPAR yes 118479267
chr1 231347390 231347400 FLI1 JASPAR yes 118479268
chr1 231347390 231347400 GABPA JASPAR yes 118479269
chr1 231347390 231347401 ETV2 JASPAR yes 36083330
chr1 231347390 231347401 ETV2 JASPAR yes 118479270
chr1 231347390 231347403 ELF1 JASPAR yes 36083331
chr1 231347390 231347403 ELF1 JASPAR yes 118479271
chr1 231347390 231347405 ZIC3 JASPAR yes 36083332
chr1 231347390 231347405 ZIC3 JASPAR yes 118479272
chr1 231347391 231347398 SPI1 JASPAR yes 36083333
chr1 231347391 231347398 SPI1 JASPAR yes 118479273
chr1 231347391 231347399 EHF JASPAR yes 36083334
chr1 231347391 231347399 FEV JASPAR yes 36083335
chr1 231347391 231347399 EHF JASPAR yes 118479274
chr1 231347391 231347399 FEV JASPAR yes 118479275
chr1 231347396 231347400 NFE TRANSFAC yes 36083336
chr1 231347396 231347400 NFE TRANSFAC yes 118479276
chr1 231347407 231347428 ZNF263 JASPAR yes 36083337
chr1 231347407 231347428 ZNF263 JASPAR yes 118479277
chr1 231347413 231347434 ZNF263 JASPAR yes 36083338
chr1 231347413 231347434 ZNF263 JASPAR yes 118479278
chr1 231347421 231347436 NR2C2 JASPAR yes 36083339
chr1 231347421 231347436 NR2C2 JASPAR yes 118479279
chr1 231347455 231347465 POU6F2 JASPAR yes 36083340
chr1 231347455 231347465 POU6F2 JASPAR yes 118479280
chr1 231347456 231347466 MEOX1 JASPAR yes 36083341
chr1 231347456 231347466 MEOX1 JASPAR yes 118479281
chr1 231347459 231347463 YY1 TRANSFAC yes 36083342
chr1 231347459 231347463 YY1 TRANSFAC yes 118479282
SNP sites on vista5521[chr1:231347338-231347496]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 231347351 rs114115802 C T
CTCF ETS1 FLI1 RAD21 RUNX3 SMC3 TCF12 ZNF263
1022126
chr1 231347476 rs4658904 G A,C
ZNF263
1022127
Genes possibly regulated by vista5521[chr1:231347338-231347496]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 231297858 231357302 + TRIM67 ENSG00000119283.11 231297858 0.79 0.94 1946 50520
chr1 231359509 231376933 - C1orf131 ENSG00000143633.8 231376933 0.76 0.98 1947 70563
chr1 231376953 231413719 + GNPAT ENSG00000116906.7 231376953 0.59 0.99 1948 70543
Expression level of Genes
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miRNAs possibly regulated by vista5521[chr1:231347338-231347496]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results