EnhancerDB
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  3. vista5523[chr1:231513422-231513769]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5523[chr1:231513422-231513769]
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Tissue distribution of vista5523
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Transcription factor that possibly regulate vista5523[chr1:231513422-231513769]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 231513414 231513422 OTX2 JASPAR yes 36086132
chr1 231513414 231513422 OTX2 JASPAR yes 118479291
chr1 231513419 231513424 GATA2 JASPAR yes 36086133
chr1 231513419 231513424 GATA2 JASPAR yes 118479292
chr1 231513435 231513447 FOXI1 JASPAR yes 36086134
chr1 231513435 231513447 FOXI1 JASPAR yes 118479293
chr1 231513465 231513470 ETS2 TRANSFAC yes 36086135
chr1 231513465 231513470 ETS2 TRANSFAC yes 118479294
chr1 231513473 231513488 TFAP2A JASPAR yes 36086136
chr1 231513473 231513488 TFAP2C JASPAR yes 36086137
chr1 231513473 231513488 TFAP2A JASPAR yes 118479295
chr1 231513473 231513488 TFAP2C JASPAR yes 118479296
chr1 231513482 231513491 TFAP2A JASPAR yes 36086138
chr1 231513482 231513491 TFAP2A JASPAR yes 118479297
chr1 231513493 231513498 GATA1 TRANSFAC yes 36086139
chr1 231513493 231513498 GATA1 TRANSFAC yes 118479298
chr1 231513497 231513507 MZF1 JASPAR yes 36086140
chr1 231513497 231513507 MZF1 JASPAR yes 118479299
chr1 231513497 231513517 PPARG JASPAR yes 36086141
chr1 231513497 231513517 PPARG JASPAR yes 118479300
chr1 231513510 231513520 EN2 JASPAR yes 36086142
chr1 231513510 231513520 ESX1 JASPAR yes 36086143
chr1 231513510 231513520 GBX1 JASPAR yes 36086144
chr1 231513510 231513520 GBX2 JASPAR yes 36086145
chr1 231513510 231513520 GSX1 JASPAR yes 36086146
chr1 231513510 231513520 LBX2 JASPAR yes 36086147
chr1 231513510 231513520 LHX2 JASPAR yes 36086148
chr1 231513510 231513520 EN2 JASPAR yes 118479301
chr1 231513510 231513520 ESX1 JASPAR yes 118479302
chr1 231513510 231513520 GBX1 JASPAR yes 118479303
chr1 231513510 231513520 GBX2 JASPAR yes 118479304
chr1 231513510 231513520 GSX1 JASPAR yes 118479305
chr1 231513510 231513520 LBX2 JASPAR yes 118479306
chr1 231513510 231513520 LHX2 JASPAR yes 118479307
chr1 231513511 231513519 BARX1 JASPAR yes 36086149
chr1 231513511 231513519 BSX JASPAR yes 36086150
chr1 231513511 231513519 EN1 JASPAR yes 36086151
chr1 231513511 231513519 ISX JASPAR yes 36086152
chr1 231513511 231513519 LHX9 JASPAR yes 36086153
chr1 231513511 231513519 MSX1 JASPAR yes 36086154
chr1 231513511 231513519 MSX2 JASPAR yes 36086155
chr1 231513511 231513519 PRRX1 JASPAR yes 36086156
chr1 231513511 231513519 RAX2 JASPAR yes 36086157
chr1 231513511 231513519 SHOX JASPAR yes 36086158
chr1 231513511 231513519 BARX1 JASPAR yes 118479308
chr1 231513511 231513519 BSX JASPAR yes 118479309
chr1 231513511 231513519 EN1 JASPAR yes 118479310
chr1 231513511 231513519 ISX JASPAR yes 118479311
chr1 231513511 231513519 LHX9 JASPAR yes 118479312
chr1 231513511 231513519 MSX1 JASPAR yes 118479313
chr1 231513511 231513519 MSX2 JASPAR yes 118479314
chr1 231513511 231513519 PRRX1 JASPAR yes 118479315
chr1 231513511 231513519 RAX2 JASPAR yes 118479316
chr1 231513511 231513519 SHOX JASPAR yes 118479317
chr1 231513521 231513531 SREBF2 JASPAR yes 36086159
chr1 231513521 231513531 SREBF2 JASPAR yes 118479318
chr1 231513558 231513561 MYB TRANSFAC yes 36086160
chr1 231513558 231513561 MYB TRANSFAC yes 118479319
chr1 231513606 231513610 YY1 TRANSFAC yes 36086161
chr1 231513606 231513610 YY1 TRANSFAC yes 118479320
chr1 231513630 231513651 IRF1 JASPAR yes 36086162
chr1 231513630 231513651 IRF1 JASPAR yes 118479321
chr1 231513634 231513649 PRDM1 JASPAR yes 36086163
chr1 231513634 231513649 PRDM1 JASPAR yes 118479322
chr1 231513635 231513647 IRF1 JASPAR yes 36086164
chr1 231513635 231513647 IRF1 JASPAR yes 118479323
chr1 231513646 231513661 FOXP1 JASPAR yes 36086165
chr1 231513646 231513661 FOXP1 JASPAR yes 118479324
chr1 231513692 231513703 PROP1 JASPAR yes 36086166
chr1 231513692 231513703 PROP1 JASPAR yes 118479325
chr1 231513701 231513712 PHOX2A JASPAR yes 36086167
chr1 231513701 231513712 PROP1 JASPAR yes 36086168
chr1 231513701 231513712 PHOX2A JASPAR yes 118479326
chr1 231513701 231513712 PROP1 JASPAR yes 118479327
chr1 231513706 231513717 PHOX2A JASPAR yes 36086169
chr1 231513706 231513717 PROP1 JASPAR yes 36086170
chr1 231513706 231513717 PHOX2A JASPAR yes 118479328
chr1 231513706 231513717 PROP1 JASPAR yes 118479329
chr1 231513722 231513726 TEAD2 TRANSFAC yes 36086171
chr1 231513722 231513726 TEAD2 TRANSFAC yes 118479330
chr1 231513755 231513766 PROP1 JASPAR yes 36086172
chr1 231513755 231513766 PROP1 JASPAR yes 118479331
chr1 231513755 231513771 POU4F3 JASPAR yes 36086173
chr1 231513755 231513771 POU4F3 JASPAR yes 118479332
chr1 231513757 231513771 POU4F1 JASPAR yes 36086174
chr1 231513757 231513771 POU4F1 JASPAR yes 118479333
chr1 231513764 231513768 YY1 TRANSFAC yes 36086175
chr1 231513764 231513768 YY1 TRANSFAC yes 118479334
SNP sites on vista5523[chr1:231513422-231513769]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 231513431 rs2491405 C A no 1022451
chr1 231513473 rs530948024 G A
TFAP2A TFAP2C
1022452
chr1 231513539 rs553637535 G A no 1022453
chr1 231513545 rs567091901 A C no 1022454
chr1 231513601 rs114293923 A G no 1022455
chr1 231513629 rs34165011 TC T no 1022456
chr1 231513653 rs2572252 T C
FOXP1
1022457
chr1 231513685 rs192401673 A C,G no 1022458
Genes possibly regulated by vista5523[chr1:231513422-231513769]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 231468480 231473598 - EXOC8 ENSG00000116903.6 231473598 0.64 0.99 1949 60176
chr1 231472850 231490769 + SPRTN ENSG00000010072.11 231472850 0.67 0.99 1950 59428
chr1 231499497 231560790 - EGLN1 ENSG00000135766.8 231560790 0.6 1.0 1951 52979
Expression level of Genes
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miRNAs possibly regulated by vista5523[chr1:231513422-231513769]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results