EnhancerDB
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  3. vista553[chr1:17454855-17455288]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista553[chr1:17454855-17455288]
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Tissue distribution of vista553
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Transcription factor that possibly regulate vista553[chr1:17454855-17455288]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 17454848 17454860 TGIF1 JASPAR yes 27070539
chr1 17454848 17454860 TGIF1 JASPAR yes 118240246
chr1 17454854 17454858 NFE TRANSFAC yes 27070540
chr1 17454854 17454858 NFE TRANSFAC yes 118240247
chr1 17454859 17454871 ZBTB7B JASPAR yes 27070541
chr1 17454859 17454871 ZBTB7B JASPAR yes 118240248
chr1 17454899 17454913 JUN JASPAR yes 27070542
chr1 17454899 17454913 JUN JASPAR yes 118240249
chr1 17454901 17454912 BATF JASPAR yes 27070543
chr1 17454901 17454912 BATF JASPAR yes 118240250
chr1 17454903 17454914 FOS JASPAR yes 27070544
chr1 17454903 17454914 FOSL1 JASPAR yes 27070545
chr1 17454903 17454914 JUND JASPAR yes 27070546
chr1 17454903 17454914 FOS JASPAR yes 118240251
chr1 17454903 17454914 FOSL1 JASPAR yes 118240252
chr1 17454903 17454914 JUND JASPAR yes 118240253
chr1 17454904 17454913 JDP2 JASPAR yes 27070547
chr1 17454904 17454913 JDP2 JASPAR yes 118240254
chr1 17454904 17454915 FOSL2 JASPAR yes 27070548
chr1 17454904 17454915 JUNB JASPAR yes 27070549
chr1 17454904 17454915 FOSL2 JASPAR yes 118240255
chr1 17454904 17454915 JUNB JASPAR yes 118240256
chr1 17454904 17454918 JUN JASPAR yes 27070550
chr1 17454904 17454918 JUN JASPAR yes 118240257
chr1 17454907 17454918 USF1 JASPAR yes 27070551
chr1 17454907 17454918 USF1 JASPAR yes 118240258
chr1 17454908 17454918 TFEB JASPAR yes 27070552
chr1 17454908 17454918 TFEC JASPAR yes 27070553
chr1 17454908 17454918 TFEB JASPAR yes 118240259
chr1 17454908 17454918 TFEC JASPAR yes 118240260
chr1 17454908 17454919 USF2 JASPAR yes 27070554
chr1 17454908 17454919 USF2 JASPAR yes 118240261
chr1 17454935 17454948 DUXA JASPAR yes 27070555
chr1 17454935 17454948 DUXA JASPAR yes 118240262
chr1 17454940 17454943 MYB TRANSFAC yes 27070556
chr1 17454940 17454943 MYB TRANSFAC yes 118240263
chr1 17454942 17454963 IRF1 JASPAR yes 27070557
chr1 17454942 17454963 IRF1 JASPAR yes 118240264
chr1 17454944 17454959 STAT2 JASPAR yes 27070558
chr1 17454944 17454959 STAT2 JASPAR yes 118240265
chr1 17454953 17454957 YY1 TRANSFAC yes 27070559
chr1 17454953 17454957 YY1 TRANSFAC yes 118240266
chr1 17455014 17455030 POU4F2 JASPAR yes 27070560
chr1 17455014 17455030 POU4F2 JASPAR yes 118240267
chr1 17455018 17455032 POU4F1 JASPAR yes 27070561
chr1 17455018 17455032 POU4F1 JASPAR yes 118240268
chr1 17455018 17455034 POU4F2 JASPAR yes 27070562
chr1 17455018 17455034 POU4F3 JASPAR yes 27070563
chr1 17455018 17455034 POU4F2 JASPAR yes 118240269
chr1 17455018 17455034 POU4F3 JASPAR yes 118240270
chr1 17455021 17455031 EMX1 JASPAR yes 27070564
chr1 17455021 17455031 EMX2 JASPAR yes 27070565
chr1 17455021 17455031 GSX1 JASPAR yes 27070566
chr1 17455021 17455031 LHX2 JASPAR yes 27070567
chr1 17455021 17455031 LHX6 JASPAR yes 27070568
chr1 17455021 17455031 MIXL1 JASPAR yes 27070569
chr1 17455021 17455031 MNX1 JASPAR yes 27070570
chr1 17455021 17455031 NOTO JASPAR yes 27070571
chr1 17455021 17455031 POU6F1 JASPAR yes 27070572
chr1 17455021 17455031 RAX JASPAR yes 27070573
chr1 17455021 17455031 EMX1 JASPAR yes 118240271
chr1 17455021 17455031 EMX2 JASPAR yes 118240272
chr1 17455021 17455031 GSX1 JASPAR yes 118240273
chr1 17455021 17455031 LHX2 JASPAR yes 118240274
chr1 17455021 17455031 LHX6 JASPAR yes 118240275
chr1 17455021 17455031 MIXL1 JASPAR yes 118240276
chr1 17455021 17455031 MNX1 JASPAR yes 118240277
chr1 17455021 17455031 NOTO JASPAR yes 118240278
chr1 17455021 17455031 POU6F1 JASPAR yes 118240279
chr1 17455021 17455031 RAX JASPAR yes 118240280
chr1 17455022 17455030 ISX JASPAR yes 27070574
chr1 17455022 17455030 LMX1A JASPAR yes 27070575
chr1 17455022 17455030 LMX1B JASPAR yes 27070576
chr1 17455022 17455030 NKX6-1 JASPAR yes 27070577
chr1 17455022 17455030 NKX6-2 JASPAR yes 27070578
chr1 17455022 17455030 PRRX1 JASPAR yes 27070579
chr1 17455022 17455030 RAX2 JASPAR yes 27070580
chr1 17455022 17455030 SHOX JASPAR yes 27070581
chr1 17455022 17455030 UNCX JASPAR yes 27070582
chr1 17455022 17455030 VAX1 JASPAR yes 27070583
chr1 17455022 17455030 ISX JASPAR yes 118240281
chr1 17455022 17455030 LMX1A JASPAR yes 118240282
chr1 17455022 17455030 LMX1B JASPAR yes 118240283
chr1 17455022 17455030 NKX6-1 JASPAR yes 118240284
chr1 17455022 17455030 NKX6-2 JASPAR yes 118240285
chr1 17455022 17455030 PRRX1 JASPAR yes 118240286
chr1 17455022 17455030 RAX2 JASPAR yes 118240287
chr1 17455022 17455030 SHOX JASPAR yes 118240288
chr1 17455022 17455030 UNCX JASPAR yes 118240289
chr1 17455022 17455030 VAX1 JASPAR yes 118240290
chr1 17455023 17455033 PAX7 JASPAR yes 27070584
chr1 17455023 17455033 PAX7 JASPAR yes 118240291
chr1 17455024 17455034 HOXC10 JASPAR yes 27070585
chr1 17455024 17455034 HOXC10 JASPAR yes 118240292
chr1 17455024 17455035 HOXC11 JASPAR yes 27070586
chr1 17455024 17455035 HOXC11 JASPAR yes 118240293
chr1 17455025 17455035 EMX1 JASPAR yes 27070587
chr1 17455025 17455035 MEOX2 JASPAR yes 27070588
chr1 17455025 17455035 EMX1 JASPAR yes 118240294
chr1 17455025 17455035 MEOX2 JASPAR yes 118240295
chr1 17455026 17455034 NKX6-1 JASPAR yes 27070589
chr1 17455026 17455034 NKX6-1 JASPAR yes 118240296
chr1 17455032 17455046 JUN JASPAR yes 27070590
chr1 17455032 17455046 JUN JASPAR yes 118240297
chr1 17455035 17455046 FOSL2 JASPAR yes 27070591
chr1 17455035 17455046 JUNB JASPAR yes 27070592
chr1 17455035 17455046 FOSL2 JASPAR yes 118240298
chr1 17455035 17455046 JUNB JASPAR yes 118240299
chr1 17455036 17455047 FOS JASPAR yes 27070593
chr1 17455036 17455047 FOSL1 JASPAR yes 27070594
chr1 17455036 17455047 JUND JASPAR yes 27070595
chr1 17455036 17455047 NFE2 JASPAR yes 27070596
chr1 17455036 17455047 FOS JASPAR yes 118240300
chr1 17455036 17455047 FOSL1 JASPAR yes 118240301
chr1 17455036 17455047 JUND JASPAR yes 118240302
chr1 17455036 17455047 NFE2 JASPAR yes 118240303
chr1 17455037 17455044 JUN TRANSFAC yes 27070597
chr1 17455037 17455044 JUN TRANSFAC yes 118240304
chr1 17455037 17455046 JDP2 JASPAR yes 27070598
chr1 17455037 17455046 JDP2 JASPAR yes 118240305
chr1 17455037 17455048 FOSL2 JASPAR yes 27070599
chr1 17455037 17455048 JUNB JASPAR yes 27070600
chr1 17455037 17455048 FOSL2 JASPAR yes 118240306
chr1 17455037 17455048 JUNB JASPAR yes 118240307
chr1 17455037 17455051 JUN JASPAR yes 27070601
chr1 17455037 17455051 JUN JASPAR yes 118240308
chr1 17455038 17455049 BATF JASPAR yes 27070602
chr1 17455038 17455049 BATF JASPAR yes 118240309
chr1 17455047 17455057 ETV6 JASPAR yes 27070603
chr1 17455047 17455057 ETV6 JASPAR yes 118240310
chr1 17455047 17455061 SPI1 JASPAR yes 27070604
chr1 17455047 17455061 SPIC JASPAR yes 27070605
chr1 17455047 17455061 SPI1 JASPAR yes 118240311
chr1 17455047 17455061 SPIC JASPAR yes 118240312
chr1 17455051 17455066 LEF1 JASPAR yes 27070606
chr1 17455051 17455066 LEF1 JASPAR yes 118240313
chr1 17455051 17455072 ZNF263 JASPAR yes 27070607
chr1 17455051 17455072 ZNF263 JASPAR yes 118240314
chr1 17455052 17455066 TCF7L2 JASPAR yes 27070608
chr1 17455052 17455066 TCF7L2 JASPAR yes 118240315
chr1 17455055 17455061 LEF1 TRANSFAC yes 27070609
chr1 17455055 17455061 SOX10 JASPAR yes 27070610
chr1 17455055 17455061 LEF1 TRANSFAC yes 118240316
chr1 17455055 17455061 SOX10 JASPAR yes 118240317
chr1 17455083 17455091 MEIS2 JASPAR yes 27070611
chr1 17455083 17455091 MEIS3 JASPAR yes 27070612
chr1 17455083 17455091 MEIS2 JASPAR yes 118240318
chr1 17455083 17455091 MEIS3 JASPAR yes 118240319
chr1 17455085 17455096 ETV2 JASPAR yes 27070613
chr1 17455085 17455096 ETV2 JASPAR yes 118240320
chr1 17455086 17455096 ERG JASPAR yes 27070614
chr1 17455086 17455096 ETS1 JASPAR yes 27070615
chr1 17455086 17455096 FLI1 JASPAR yes 27070616
chr1 17455086 17455096 ERG JASPAR yes 118240321
chr1 17455086 17455096 ETS1 JASPAR yes 118240322
chr1 17455086 17455096 FLI1 JASPAR yes 118240323
chr1 17455086 17455097 FLI1 JASPAR yes 27070617
chr1 17455086 17455097 FLI1 JASPAR yes 118240324
chr1 17455101 17455105 NFE TRANSFAC yes 27070618
chr1 17455101 17455105 NFE TRANSFAC yes 118240325
chr1 17455132 17455144 TFAP2A JASPAR yes 27070619
chr1 17455132 17455144 TFAP2A JASPAR yes 118240326
chr1 17455138 17455146 E2F1 JASPAR yes 27070620
chr1 17455138 17455146 E2F1 JASPAR yes 118240327
chr1 17455153 17455162 THAP1 JASPAR yes 27070621
chr1 17455153 17455162 THAP1 JASPAR yes 118240328
chr1 17455160 17455163 MYB TRANSFAC yes 27070622
chr1 17455160 17455163 MYB TRANSFAC yes 118240329
chr1 17455178 17455181 MYB TRANSFAC yes 27070623
chr1 17455178 17455181 MYB TRANSFAC yes 118240330
chr1 17455205 17455219 GATA2 JASPAR yes 27070624
chr1 17455205 17455219 GATA2 JASPAR yes 118240331
chr1 17455209 17455217 GATA5 JASPAR yes 27070625
chr1 17455209 17455217 GATA5 JASPAR yes 118240332
chr1 17455226 17455233 SPIB JASPAR yes 27070626
chr1 17455226 17455233 SPIB JASPAR yes 118240333
chr1 17455231 17455235 NFE TRANSFAC yes 27070627
chr1 17455231 17455235 NFE TRANSFAC yes 118240334
chr1 17455242 17455254 MEF2D JASPAR yes 27070628
chr1 17455242 17455254 MEF2D JASPAR yes 118240335
chr1 17455244 17455248 TEAD2 TRANSFAC yes 27070629
chr1 17455244 17455248 TEAD2 TRANSFAC yes 118240336
chr1 17455244 17455249 TBP TRANSFAC yes 27070630
chr1 17455244 17455249 TBP TRANSFAC yes 118240337
chr1 17455244 17455250 TMF TRANSFAC yes 27070631
chr1 17455244 17455250 TMF TRANSFAC yes 118240338
chr1 17455272 17455280 TEAD3 JASPAR yes 27070632
chr1 17455272 17455280 TEAD3 JASPAR yes 118240339
chr1 17455274 17455288 NR2F1 JASPAR yes 27070633
chr1 17455274 17455288 NR2F1 JASPAR yes 118240340
chr1 17455282 17455292 POU6F2 JASPAR yes 27070634
chr1 17455282 17455292 POU6F2 JASPAR yes 118240341
chr1 17455283 17455293 MEOX2 JASPAR yes 27070635
chr1 17455283 17455293 MEOX2 JASPAR yes 118240342
chr1 17455286 17455290 YY1 TRANSFAC yes 27070636
chr1 17455286 17455290 YY1 TRANSFAC yes 118240343
SNP sites on vista553[chr1:17454855-17455288]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 17454886 rs577914717 A G no 115881
chr1 17455095 rs141109693 C T
ERG ETS1 ETV2 FLI1
115882
chr1 17455140 rs569189766 C T
E2F1 TFAP2A
115883
Genes possibly regulated by vista553[chr1:17454855-17455288]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 17345217 17380665 - SDHB ENSG00000117118.5 17380665 0.78 0.99 240 25810
chr1 17393256 17445948 - PADI2 ENSG00000117115.8 17445948 0.86 1.0 241 91093
chr1 17531621 17572500 + PADI1 ENSG00000142623.8 17531621 1.0 0.97 242 23667
Expression level of Genes
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miRNAs possibly regulated by vista553[chr1:17454855-17455288]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results