EnhancerDB
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  3. vista5536[chr1:231862401-231862670]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5536[chr1:231862401-231862670]
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Tissue distribution of vista5536
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Transcription factor that possibly regulate vista5536[chr1:231862401-231862670]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 231862395 231862410 ZIC4 JASPAR yes 36110972
chr1 231862395 231862410 ZIC4 JASPAR yes 118479860
chr1 231862396 231862410 ZIC1 JASPAR yes 36110973
chr1 231862396 231862410 ZIC1 JASPAR yes 118479861
chr1 231862403 231862408 SP1 TRANSFAC yes 36110974
chr1 231862403 231862408 SP1 TRANSFAC yes 118479862
chr1 231862415 231862419 TEAD2 TRANSFAC yes 36110975
chr1 231862415 231862419 TEAD2 TRANSFAC yes 118479863
chr1 231862415 231862420 TBP TRANSFAC yes 36110976
chr1 231862415 231862420 TBP TRANSFAC yes 118479864
chr1 231862415 231862421 TMF TRANSFAC yes 36110977
chr1 231862415 231862421 TMF TRANSFAC yes 118479865
chr1 231862419 231862437 RARA JASPAR yes 36110978
chr1 231862419 231862437 RARA JASPAR yes 118479866
chr1 231862429 231862439 SREBF1 JASPAR yes 36110979
chr1 231862429 231862439 SREBF2 JASPAR yes 36110980
chr1 231862429 231862439 SREBF1 JASPAR yes 118479867
chr1 231862429 231862439 SREBF2 JASPAR yes 118479868
chr1 231862448 231862452 LFA1 TRANSFAC yes 36110981
chr1 231862448 231862452 LFA1 TRANSFAC yes 118479869
chr1 231862459 231862469 HOXA13 JASPAR yes 36110982
chr1 231862459 231862469 HOXB13 JASPAR yes 36110983
chr1 231862459 231862469 HOXD13 JASPAR yes 36110984
chr1 231862459 231862469 HOXA13 JASPAR yes 118479870
chr1 231862459 231862469 HOXB13 JASPAR yes 118479871
chr1 231862459 231862469 HOXD13 JASPAR yes 118479872
chr1 231862459 231862470 HOXC13 JASPAR yes 36110985
chr1 231862459 231862470 HOXC13 JASPAR yes 118479873
chr1 231862463 231862467 TEAD2 TRANSFAC yes 36110986
chr1 231862463 231862467 TEAD2 TRANSFAC yes 118479874
chr1 231862463 231862473 NKX2-3 JASPAR yes 36110987
chr1 231862463 231862473 NKX2-3 JASPAR yes 118479875
chr1 231862464 231862473 NKX3-2 JASPAR yes 36110988
chr1 231862464 231862473 NKX3-2 JASPAR yes 118479876
chr1 231862470 231862481 USF1 JASPAR yes 36110989
chr1 231862470 231862481 USF2 JASPAR yes 36110990
chr1 231862470 231862481 USF1 JASPAR yes 118479877
chr1 231862470 231862481 USF2 JASPAR yes 118479878
chr1 231862471 231862481 TFEB JASPAR yes 36110991
chr1 231862471 231862481 TFEC JASPAR yes 36110992
chr1 231862471 231862481 TFEB JASPAR yes 118479879
chr1 231862471 231862481 TFEC JASPAR yes 118479880
chr1 231862471 231862482 USF1 JASPAR yes 36110993
chr1 231862471 231862482 USF1 JASPAR yes 118479881
chr1 231862478 231862488 TFCP2 JASPAR yes 36110994
chr1 231862478 231862488 TFCP2 JASPAR yes 118479882
chr1 231862502 231862505 MYB TRANSFAC yes 36110995
chr1 231862502 231862505 MYB TRANSFAC yes 118479883
chr1 231862510 231862514 NFE TRANSFAC yes 36110996
chr1 231862510 231862514 NFE TRANSFAC yes 118479884
chr1 231862516 231862530 SPI1 JASPAR yes 36110997
chr1 231862516 231862530 SPI1 JASPAR yes 118479885
chr1 231862517 231862530 ELF1 JASPAR yes 36110998
chr1 231862517 231862530 ELF1 JASPAR yes 118479886
chr1 231862518 231862530 EHF JASPAR yes 36110999
chr1 231862518 231862530 ELF1 JASPAR yes 36111000
chr1 231862518 231862530 ELF4 JASPAR yes 36111001
chr1 231862518 231862530 EHF JASPAR yes 118479887
chr1 231862518 231862530 ELF1 JASPAR yes 118479888
chr1 231862518 231862530 ELF4 JASPAR yes 118479889
chr1 231862518 231862531 ELF3 JASPAR yes 36111002
chr1 231862518 231862531 ELF3 JASPAR yes 118479890
chr1 231862519 231862530 ELF5 JASPAR yes 36111003
chr1 231862519 231862530 ELF5 JASPAR yes 118479891
chr1 231862520 231862530 ETV6 JASPAR yes 36111004
chr1 231862520 231862530 ETV6 JASPAR yes 118479892
chr1 231862520 231862531 ELK4 JASPAR yes 36111005
chr1 231862520 231862531 FLI1 JASPAR yes 36111006
chr1 231862520 231862531 ELK4 JASPAR yes 118479893
chr1 231862520 231862531 FLI1 JASPAR yes 118479894
chr1 231862521 231862529 EHF JASPAR yes 36111007
chr1 231862521 231862529 FEV JASPAR yes 36111008
chr1 231862521 231862529 EHF JASPAR yes 118479895
chr1 231862521 231862529 FEV JASPAR yes 118479896
chr1 231862522 231862529 SPI1 JASPAR yes 36111009
chr1 231862522 231862529 SPI1 JASPAR yes 118479897
chr1 231862562 231862575 ATF4 JASPAR yes 36111010
chr1 231862562 231862575 ATF4 JASPAR yes 118479898
chr1 231862570 231862583 HSF2 JASPAR yes 36111011
chr1 231862570 231862583 HSF2 JASPAR yes 118479899
chr1 231862573 231862584 STAT3 JASPAR yes 36111012
chr1 231862573 231862584 STAT3 JASPAR yes 118479900
chr1 231862574 231862585 STAT3 JASPAR yes 36111013
chr1 231862574 231862585 STAT3 JASPAR yes 118479901
chr1 231862574 231862589 HSF1 JASPAR yes 36111014
chr1 231862574 231862589 MEF2C JASPAR yes 36111015
chr1 231862574 231862589 HSF1 JASPAR yes 118479902
chr1 231862574 231862589 MEF2C JASPAR yes 118479903
chr1 231862575 231862588 HSF1 JASPAR yes 36111016
chr1 231862575 231862588 HSF2 JASPAR yes 36111017
chr1 231862575 231862588 HSF4 JASPAR yes 36111018
chr1 231862575 231862588 HSF1 JASPAR yes 118479904
chr1 231862575 231862588 HSF2 JASPAR yes 118479905
chr1 231862575 231862588 HSF4 JASPAR yes 118479906
chr1 231862575 231862590 MEF2A JASPAR yes 36111019
chr1 231862575 231862590 MEF2A JASPAR yes 118479907
chr1 231862585 231862599 POU1F1 JASPAR yes 36111020
chr1 231862585 231862599 POU1F1 JASPAR yes 118479908
chr1 231862586 231862598 POU3F1 JASPAR yes 36111021
chr1 231862586 231862598 POU3F2 JASPAR yes 36111022
chr1 231862586 231862598 POU3F1 JASPAR yes 118479909
chr1 231862586 231862598 POU3F2 JASPAR yes 118479910
chr1 231862586 231862599 POU3F3 JASPAR yes 36111023
chr1 231862586 231862599 POU3F3 JASPAR yes 118479911
chr1 231862589 231862594 GATA2 JASPAR yes 36111024
chr1 231862589 231862594 GATA2 JASPAR yes 118479912
chr1 231862614 231862620 MYC TRANSFAC yes 36111025
chr1 231862614 231862620 MYC TRANSFAC yes 118479913
chr1 231862627 231862645 SRF JASPAR yes 36111026
chr1 231862627 231862645 SRF JASPAR yes 118479914
chr1 231862662 231862673 STAT3 JASPAR yes 36111027
chr1 231862662 231862673 STAT3 JASPAR yes 118479915
SNP sites on vista5536[chr1:231862401-231862670]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 231862443 rs372656493 G A no 1024777
chr1 231862611 rs560128950 T G no 1024778
Genes possibly regulated by vista5536[chr1:231862401-231862670]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 231762561 232177018 + DISC1 ENSG00000162946.16 231762561 0.85 0.99 1954 160
Expression level of Genes
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miRNAs possibly regulated by vista5536[chr1:231862401-231862670]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results