EnhancerDB
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  3. vista554[chr1:17467941-17468133]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista554[chr1:17467941-17468133]
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Tissue distribution of vista554
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Transcription factor that possibly regulate vista554[chr1:17467941-17468133]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 17467930 17467945 MAFK JASPAR yes 27072408
chr1 17467930 17467945 MAFK JASPAR yes 118240344
chr1 17467941 17467956 FOXP1 JASPAR yes 27072409
chr1 17467941 17467956 FOXP1 JASPAR yes 118240345
chr1 17467942 17467948 TBP TRANSFAC yes 27072410
chr1 17467942 17467948 TBP TRANSFAC yes 118240346
chr1 17467943 17467955 FOXC2 JASPAR yes 27072411
chr1 17467943 17467955 FOXC2 JASPAR yes 118240347
chr1 17467944 17467955 FOXP2 JASPAR yes 27072412
chr1 17467944 17467955 FOXP2 JASPAR yes 118240348
chr1 17467945 17467960 FOXP1 JASPAR yes 27072413
chr1 17467945 17467960 FOXP1 JASPAR yes 118240349
chr1 17467946 17467957 FOXA1 JASPAR yes 27072414
chr1 17467946 17467957 FOXA1 JASPAR yes 118240350
chr1 17467948 17467960 FOXI1 JASPAR yes 27072415
chr1 17467948 17467960 FOXI1 JASPAR yes 118240351
chr1 17467976 17467996 PPARG JASPAR yes 27072416
chr1 17467976 17467996 PPARG JASPAR yes 118240352
chr1 17467977 17467997 PPARG JASPAR yes 27072417
chr1 17467977 17467997 PPARG JASPAR yes 118240353
chr1 17467980 17467984 H4TF2 TRANSFAC yes 27072418
chr1 17467980 17467984 H4TF2 TRANSFAC yes 118240354
chr1 17467980 17468000 ESR1 JASPAR yes 27072419
chr1 17467980 17468000 ESR1 JASPAR yes 118240355
chr1 17467993 17468003 SREBF2 JASPAR yes 27072420
chr1 17467993 17468003 SREBF2 JASPAR yes 118240356
chr1 17467998 17468008 SREBF2 JASPAR yes 27072421
chr1 17467998 17468008 SREBF2 JASPAR yes 118240357
chr1 17468002 17468016 GATA2 JASPAR yes 27072422
chr1 17468002 17468016 GATA2 JASPAR yes 118240358
chr1 17468004 17468010 GATA1 TRANSFAC yes 27072423
chr1 17468004 17468010 GATA1 TRANSFAC yes 118240359
chr1 17468004 17468012 GATA5 JASPAR yes 27072424
chr1 17468004 17468012 GATA5 JASPAR yes 118240360
chr1 17468008 17468013 ETS2 TRANSFAC yes 27072425
chr1 17468008 17468013 ETS2 TRANSFAC yes 118240361
chr1 17468008 17468016 FEV JASPAR yes 27072426
chr1 17468008 17468016 FEV JASPAR yes 118240362
chr1 17468009 17468016 SPI1 JASPAR yes 27072427
chr1 17468009 17468016 SPI1 JASPAR yes 118240363
chr1 17468009 17468019 NFKB1 JASPAR yes 27072428
chr1 17468009 17468019 NFKB1 JASPAR yes 118240364
chr1 17468010 17468020 NFKB1 JASPAR yes 27072429
chr1 17468010 17468020 REL JASPAR yes 27072430
chr1 17468010 17468020 NFKB1 JASPAR yes 118240365
chr1 17468010 17468020 REL JASPAR yes 118240366
chr1 17468020 17468035 LEF1 JASPAR yes 27072431
chr1 17468020 17468035 LEF1 JASPAR yes 118240367
chr1 17468021 17468035 TCF7L2 JASPAR yes 27072432
chr1 17468021 17468035 TCF7L2 JASPAR yes 118240368
chr1 17468044 17468047 MYB TRANSFAC yes 27072433
chr1 17468044 17468047 MYB TRANSFAC yes 118240369
chr1 17468054 17468063 HIC2 JASPAR yes 27072434
chr1 17468054 17468063 HIC2 JASPAR yes 118240370
chr1 17468063 17468078 AR JASPAR yes 27072435
chr1 17468063 17468078 AR JASPAR yes 118240371
chr1 17468064 17468079 LEF1 JASPAR yes 27072436
chr1 17468064 17468079 LEF1 JASPAR yes 118240372
chr1 17468068 17468074 LEF1 TRANSFAC yes 27072437
chr1 17468068 17468074 SOX10 JASPAR yes 27072438
chr1 17468068 17468074 LEF1 TRANSFAC yes 118240373
chr1 17468068 17468074 SOX10 JASPAR yes 118240374
chr1 17468073 17468078 ETS2 TRANSFAC yes 27072439
chr1 17468073 17468078 ETS2 TRANSFAC yes 118240375
chr1 17468074 17468095 IRF1 JASPAR yes 27072440
chr1 17468074 17468095 IRF1 JASPAR yes 118240376
chr1 17468076 17468091 STAT2 JASPAR yes 27072441
chr1 17468076 17468091 STAT2 JASPAR yes 118240377
chr1 17468077 17468091 STAT1 JASPAR yes 27072442
chr1 17468077 17468091 STAT1 JASPAR yes 118240378
chr1 17468100 17468106 SOX10 JASPAR yes 27072443
chr1 17468100 17468106 SOX10 JASPAR yes 118240379
chr1 17468107 17468127 RREB1 JASPAR yes 27072444
chr1 17468107 17468127 RREB1 JASPAR yes 118240380
SNP sites on vista554[chr1:17467941-17468133]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 17467966 rs78634581 G A no 116091
chr1 17468107 rs34156986 GC G
RREB1
116092
chr1 17468107 rs796895064 GC G
RREB1
116093
chr1 17468109 rs572533159 C A
RREB1
116094
chr1 17468125 rs181776426 C G
RREB1
116095
Genes possibly regulated by vista554[chr1:17467941-17468133]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 17345217 17380665 - SDHB ENSG00000117118.5 17380665 0.78 0.99 240 12724
chr1 17393256 17445948 - PADI2 ENSG00000117115.8 17445948 0.86 1.0 241 78007
chr1 17531621 17572500 + PADI1 ENSG00000142623.8 17531621 1.0 0.97 242 36512
Expression level of Genes
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miRNAs possibly regulated by vista554[chr1:17467941-17468133]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results