EnhancerDB
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  3. vista5541[chr1:231944869-231945038]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5541[chr1:231944869-231945038]
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Tissue distribution of vista5541
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Transcription factor that possibly regulate vista5541[chr1:231944869-231945038]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 231944825 231945109 STAT3 UCSC Txn Factor no Conserved 107879380
chr1 231944883 231944904 IRF1 JASPAR yes 36116056
chr1 231944883 231944904 IRF1 JASPAR yes 118480087
chr1 231944884 231944897 SMAD2 JASPAR yes 36116057
chr1 231944884 231944897 SMAD2 JASPAR yes 118480088
chr1 231944892 231944906 GATA2 JASPAR yes 36116058
chr1 231944892 231944906 GATA2 JASPAR yes 118480089
chr1 231944896 231944904 GATA3 JASPAR yes 36116059
chr1 231944896 231944904 GATA3 JASPAR yes 118480090
chr1 231944923 231944938 RUNX2 JASPAR yes 36116060
chr1 231944923 231944938 RUNX2 JASPAR yes 118480091
chr1 231944928 231944937 RUNX2 JASPAR yes 36116061
chr1 231944928 231944937 RUNX2 JASPAR yes 118480092
chr1 231944935 231944940 ETS2 TRANSFAC yes 36116062
chr1 231944935 231944940 ETS2 TRANSFAC yes 118480093
chr1 231944949 231944962 ZBTB18 JASPAR yes 36116063
chr1 231944949 231944962 ZBTB18 JASPAR yes 118480094
chr1 231944950 231944954 LFA1 TRANSFAC yes 36116064
chr1 231944950 231944954 LFA1 TRANSFAC yes 118480095
chr1 231944950 231944962 NHLH1 JASPAR yes 36116065
chr1 231944950 231944962 NHLH1 JASPAR yes 118480096
chr1 231944951 231944961 NHLH1 JASPAR yes 36116066
chr1 231944951 231944961 NHLH1 JASPAR yes 118480097
chr1 231944954 231944965 NFE2L2 JASPAR yes 36116067
chr1 231944954 231944965 NFE2L2 JASPAR yes 118480098
chr1 231944978 231944988 TFE3 JASPAR yes 36116068
chr1 231944978 231944988 TFEB JASPAR yes 36116069
chr1 231944978 231944988 TFEC JASPAR yes 36116070
chr1 231944978 231944988 TFE3 JASPAR yes 118480099
chr1 231944978 231944988 TFEB JASPAR yes 118480100
chr1 231944978 231944988 TFEC JASPAR yes 118480101
chr1 231944978 231944989 USF1 JASPAR yes 36116071
chr1 231944978 231944989 USF1 JASPAR yes 118480102
chr1 231944988 231944998 GBX2 JASPAR yes 36116072
chr1 231944988 231944998 MNX1 JASPAR yes 36116073
chr1 231944988 231944998 GBX2 JASPAR yes 118480103
chr1 231944988 231944998 MNX1 JASPAR yes 118480104
chr1 231944989 231944997 BARX1 JASPAR yes 36116074
chr1 231944989 231944997 EN1 JASPAR yes 36116075
chr1 231944989 231944997 ISL2 JASPAR yes 36116076
chr1 231944989 231944997 MSX1 JASPAR yes 36116077
chr1 231944989 231944997 MSX2 JASPAR yes 36116078
chr1 231944989 231944997 PDX1 JASPAR yes 36116079
chr1 231944989 231944997 BARX1 JASPAR yes 118480105
chr1 231944989 231944997 EN1 JASPAR yes 118480106
chr1 231944989 231944997 ISL2 JASPAR yes 118480107
chr1 231944989 231944997 MSX1 JASPAR yes 118480108
chr1 231944989 231944997 MSX2 JASPAR yes 118480109
chr1 231944989 231944997 PDX1 JASPAR yes 118480110
chr1 231944990 231945001 PHOX2A JASPAR yes 36116080
chr1 231944990 231945001 PHOX2A JASPAR yes 118480111
chr1 231945004 231945015 STAT1 JASPAR yes 36116081
chr1 231945004 231945015 STAT1 JASPAR yes 118480112
chr1 231945011 231945021 TFCP2 JASPAR yes 36116082
chr1 231945011 231945021 TFCP2 JASPAR yes 118480113
chr1 231945015 231945020 MYC TRANSFAC yes 36116083
chr1 231945015 231945020 MYC TRANSFAC yes 118480114
chr1 231945018 231945024 NFIC JASPAR yes 36116084
chr1 231945018 231945024 NFIC JASPAR yes 118480115
chr1 231945024 231945037 SCRT2 JASPAR yes 36116085
chr1 231945024 231945037 SCRT2 JASPAR yes 118480116
chr1 231945024 231945039 SCRT1 JASPAR yes 36116086
chr1 231945024 231945039 SCRT1 JASPAR yes 118480117
SNP sites on vista5541[chr1:231944869-231945038]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 231944888 rs12735888 T C
IRF1 SMAD2 STAT3
1025228
chr1 231944893 rs2738870 C A
GATA2 IRF1 SMAD2 STAT3
1025229
chr1 231944897 rs148695522 T C
GATA2 GATA3 IRF1 SMAD2 STAT3
1025230
Genes possibly regulated by vista5541[chr1:231944869-231945038]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista5541[chr1:231944869-231945038]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results