EnhancerDB
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  3. vista5553[chr1:232454898-232455086]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5553[chr1:232454898-232455086]
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Tissue distribution of vista5553
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Transcription factor that possibly regulate vista5553[chr1:232454898-232455086]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 232454901 232454907 YY1 JASPAR yes 36151348
chr1 232454901 232454907 YY1 JASPAR yes 118480664
chr1 232454917 232454932 MEF2C JASPAR yes 36151349
chr1 232454917 232454932 MEF2C JASPAR yes 118480665
chr1 232454930 232454935 MYC TRANSFAC yes 36151350
chr1 232454930 232454935 MYC TRANSFAC yes 118480666
chr1 232454936 232454952 SOX4 JASPAR yes 36151351
chr1 232454936 232454952 SOX4 JASPAR yes 118480667
chr1 232454937 232454943 SOX10 JASPAR yes 36151352
chr1 232454937 232454943 SOX10 JASPAR yes 118480668
chr1 232454950 232454962 INSM1 JASPAR yes 36151353
chr1 232454950 232454962 INSM1 JASPAR yes 118480669
chr1 232454951 232454962 TFAP2A JASPAR yes 36151354
chr1 232454951 232454962 TFAP2C JASPAR yes 36151355
chr1 232454951 232454962 TFAP2A JASPAR yes 118480670
chr1 232454951 232454962 TFAP2C JASPAR yes 118480671
chr1 232454972 232454979 MEIS1 JASPAR yes 36151356
chr1 232454972 232454979 MEIS1 JASPAR yes 118480672
chr1 232454972 232454980 MEIS2 JASPAR yes 36151357
chr1 232454972 232454980 MEIS3 JASPAR yes 36151358
chr1 232454972 232454980 MEIS2 JASPAR yes 118480673
chr1 232454972 232454980 MEIS3 JASPAR yes 118480674
chr1 232454973 232454993 TP63 JASPAR yes 36151359
chr1 232454973 232454993 TP63 JASPAR yes 118480675
chr1 232454974 232454992 TP53 JASPAR yes 36151360
chr1 232454974 232454992 TP63 JASPAR yes 36151361
chr1 232454974 232454992 TP73 JASPAR yes 36151362
chr1 232454974 232454992 TP53 JASPAR yes 118480676
chr1 232454974 232454992 TP63 JASPAR yes 118480677
chr1 232454974 232454992 TP73 JASPAR yes 118480678
chr1 232454975 232454990 TP53 JASPAR yes 36151363
chr1 232454975 232454990 TP53 JASPAR yes 118480679
chr1 232454988 232454994 GATA1 TRANSFAC yes 36151364
chr1 232454988 232454994 GATA1 TRANSFAC yes 118480680
chr1 232455044 232455054 SREBF1 JASPAR yes 36151365
chr1 232455044 232455054 SREBF1 JASPAR yes 118480681
chr1 232455053 232455065 PKNOX1 JASPAR yes 36151366
chr1 232455053 232455065 PKNOX2 JASPAR yes 36151367
chr1 232455053 232455065 TGIF1 JASPAR yes 36151368
chr1 232455053 232455065 TGIF2 JASPAR yes 36151369
chr1 232455053 232455065 PKNOX1 JASPAR yes 118480682
chr1 232455053 232455065 PKNOX2 JASPAR yes 118480683
chr1 232455053 232455065 TGIF1 JASPAR yes 118480684
chr1 232455053 232455065 TGIF2 JASPAR yes 118480685
chr1 232455057 232455070 SMAD2 JASPAR yes 36151370
chr1 232455057 232455070 SMAD2 JASPAR yes 118480686
chr1 232455071 232455076 GATA2 JASPAR yes 36151371
chr1 232455071 232455076 GATA2 JASPAR yes 118480687
chr1 232455075 232455096 ZNF263 JASPAR yes 36151372
chr1 232455075 232455096 ZNF263 JASPAR yes 118480688
chr1 232455081 232455094 NR2F1 JASPAR yes 36151373
chr1 232455081 232455094 NR2F1 JASPAR yes 118480689
chr1 232455085 232455089 ESR1 TRANSFAC yes 36151374
chr1 232455085 232455089 ESR1 TRANSFAC yes 118480690
chr1 232455085 232455096 USF1 JASPAR yes 36151375
chr1 232455085 232455096 USF1 JASPAR yes 118480691
SNP sites on vista5553[chr1:232454898-232455086]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 232455004 rs149222533 C T no 1028682
chr1 232455034 rs190753006 T C no 1028683
Genes possibly regulated by vista5553[chr1:232454898-232455086]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista5553[chr1:232454898-232455086]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results