EnhancerDB
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  3. vista5554[chr1:232466294-232466418]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5554[chr1:232466294-232466418]
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Tissue distribution of vista5554
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Transcription factor that possibly regulate vista5554[chr1:232466294-232466418]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 232466289 232466303 TCF7L2 JASPAR yes 36152932
chr1 232466289 232466303 TCF7L2 JASPAR yes 118480692
chr1 232466294 232466309 FOXP1 JASPAR yes 36152933
chr1 232466294 232466309 FOXP1 JASPAR yes 118480693
chr1 232466295 232466310 FOXP1 JASPAR yes 36152934
chr1 232466295 232466310 FOXP1 JASPAR yes 118480694
chr1 232466296 232466311 FOXP1 JASPAR yes 36152935
chr1 232466296 232466311 FOXP1 JASPAR yes 118480695
chr1 232466297 232466312 FOXP1 JASPAR yes 36152936
chr1 232466297 232466312 FOXP1 JASPAR yes 118480696
chr1 232466297 232466318 IRF1 JASPAR yes 36152937
chr1 232466297 232466318 IRF1 JASPAR yes 118480697
chr1 232466298 232466313 FOXP1 JASPAR yes 36152938
chr1 232466298 232466313 FOXP1 JASPAR yes 118480698
chr1 232466298 232466319 IRF1 JASPAR yes 36152939
chr1 232466298 232466319 IRF1 JASPAR yes 118480699
chr1 232466299 232466314 FOXP1 JASPAR yes 36152940
chr1 232466299 232466314 FOXP1 JASPAR yes 118480700
chr1 232466311 232466329 MAFF JASPAR yes 36152941
chr1 232466311 232466329 MAFF JASPAR yes 118480701
chr1 232466312 232466327 MAFK JASPAR yes 36152942
chr1 232466312 232466327 MAFK JASPAR yes 118480702
chr1 232466316 232466327 NRL JASPAR yes 36152943
chr1 232466316 232466327 NRL JASPAR yes 118480703
chr1 232466341 232466356 SCRT1 JASPAR yes 36152944
chr1 232466341 232466356 SCRT1 JASPAR yes 118480704
chr1 232466345 232466351 PTF TRANSFAC yes 36152945
chr1 232466345 232466351 PTF TRANSFAC yes 118480705
chr1 232466390 232466411 IRF1 JASPAR yes 36152946
chr1 232466390 232466411 IRF1 JASPAR yes 118480706
chr1 232466391 232466412 IRF1 JASPAR yes 36152947
chr1 232466391 232466412 IRF1 JASPAR yes 118480707
chr1 232466393 232466414 IRF1 JASPAR yes 36152948
chr1 232466393 232466414 IRF1 JASPAR yes 118480708
chr1 232466394 232466415 IRF1 JASPAR yes 36152949
chr1 232466394 232466415 IRF1 JASPAR yes 118480709
chr1 232466395 232466410 FOXP1 JASPAR yes 36152950
chr1 232466395 232466410 FOXP1 JASPAR yes 118480710
chr1 232466395 232466416 IRF1 JASPAR yes 36152951
chr1 232466395 232466416 IRF1 JASPAR yes 118480711
chr1 232466396 232466411 FOXP1 JASPAR yes 36152952
chr1 232466396 232466411 FOXP1 JASPAR yes 118480712
chr1 232466396 232466417 IRF1 JASPAR yes 36152953
chr1 232466396 232466417 IRF1 JASPAR yes 118480713
chr1 232466397 232466412 FOXP1 JASPAR yes 36152954
chr1 232466397 232466412 FOXP1 JASPAR yes 118480714
chr1 232466398 232466413 FOXP1 JASPAR yes 36152955
chr1 232466398 232466413 FOXP1 JASPAR yes 118480715
chr1 232466399 232466414 FOXP1 JASPAR yes 36152956
chr1 232466399 232466414 FOXP1 JASPAR yes 118480716
chr1 232466400 232466415 FOXP1 JASPAR yes 36152957
chr1 232466400 232466415 FOXP1 JASPAR yes 118480717
chr1 232466401 232466416 FOXP1 JASPAR yes 36152958
chr1 232466401 232466416 FOXP1 JASPAR yes 118480718
chr1 232466402 232466417 FOXP1 JASPAR yes 36152959
chr1 232466402 232466417 FOXP1 JASPAR yes 118480719
chr1 232466403 232466418 FOXP1 JASPAR yes 36152960
chr1 232466403 232466418 FOXP1 JASPAR yes 118480720
chr1 232466404 232466419 FOXP1 JASPAR yes 36152961
chr1 232466404 232466419 FOXP1 JASPAR yes 118480721
SNP sites on vista5554[chr1:232466294-232466418]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 232466296 rs544698655 CAA C
FOXP1 TCF7L2
1028823
chr1 232466296 rs796089418 CAA C
FOXP1 TCF7L2
1028824
chr1 232466323 rs4649214 A G
MAFF MAFK NRL
1028825
chr1 232466380 rs56168777 G A no 1028826
Genes possibly regulated by vista5554[chr1:232466294-232466418]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista5554[chr1:232466294-232466418]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results