EnhancerDB
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  3. vista5556[chr1:232714427-232714703]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5556[chr1:232714427-232714703]
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Tissue distribution of vista5556
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Transcription factor that possibly regulate vista5556[chr1:232714427-232714703]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 232714421 232714434 ATF4 JASPAR yes 36173510
chr1 232714421 232714434 ATF4 JASPAR yes 118480735
chr1 232714432 232714437 GATA2 JASPAR yes 36173511
chr1 232714432 232714437 GATA2 JASPAR yes 118480736
chr1 232714434 232714440 MZF1 JASPAR yes 36173512
chr1 232714434 232714440 MZF1 JASPAR yes 118480737
chr1 232714461 232714482 IRF1 JASPAR yes 36173513
chr1 232714461 232714482 IRF1 JASPAR yes 118480738
chr1 232714463 232714478 PRDM1 JASPAR yes 36173514
chr1 232714463 232714478 STAT2 JASPAR yes 36173515
chr1 232714463 232714478 PRDM1 JASPAR yes 118480739
chr1 232714463 232714478 STAT2 JASPAR yes 118480740
chr1 232714469 232714474 ETS2 TRANSFAC yes 36173516
chr1 232714469 232714474 ETS2 TRANSFAC yes 118480741
chr1 232714471 232714479 EHF JASPAR yes 36173517
chr1 232714471 232714479 EHF JASPAR yes 118480742
chr1 232714473 232714478 ETS2 TRANSFAC yes 36173518
chr1 232714473 232714478 ETS2 TRANSFAC yes 118480743
chr1 232714476 232714482 LEF1 TRANSFAC yes 36173519
chr1 232714476 232714482 SOX10 JASPAR yes 36173520
chr1 232714476 232714482 LEF1 TRANSFAC yes 118480744
chr1 232714476 232714482 SOX10 JASPAR yes 118480745
chr1 232714482 232714493 FOXA1 JASPAR yes 36173521
chr1 232714482 232714493 FOXA1 JASPAR yes 118480746
chr1 232714489 232714500 SPDEF JASPAR yes 36173522
chr1 232714489 232714500 SPDEF JASPAR yes 118480747
chr1 232714495 232714506 FOXP2 JASPAR yes 36173523
chr1 232714495 232714506 FOXP2 JASPAR yes 118480748
chr1 232714496 232714504 FOXO3 JASPAR yes 36173524
chr1 232714496 232714504 FOXO3 JASPAR yes 118480749
chr1 232714496 232714511 HNF1A JASPAR yes 36173525
chr1 232714496 232714511 HNF1A JASPAR yes 118480750
chr1 232714497 232714504 FOXD2 JASPAR yes 36173526
chr1 232714497 232714504 FOXI1 JASPAR yes 36173527
chr1 232714497 232714504 FOXL1 JASPAR yes 36173528
chr1 232714497 232714504 FOXO4 JASPAR yes 36173529
chr1 232714497 232714504 FOXO6 JASPAR yes 36173530
chr1 232714497 232714504 FOXP3 JASPAR yes 36173531
chr1 232714497 232714504 FOXD2 JASPAR yes 118480751
chr1 232714497 232714504 FOXI1 JASPAR yes 118480752
chr1 232714497 232714504 FOXL1 JASPAR yes 118480753
chr1 232714497 232714504 FOXO4 JASPAR yes 118480754
chr1 232714497 232714504 FOXO6 JASPAR yes 118480755
chr1 232714497 232714504 FOXP3 JASPAR yes 118480756
chr1 232714497 232714505 FOXD1 JASPAR yes 36173532
chr1 232714497 232714505 FOXG1 JASPAR yes 36173533
chr1 232714497 232714505 FOXO3 JASPAR yes 36173534
chr1 232714497 232714505 FOXD1 JASPAR yes 118480757
chr1 232714497 232714505 FOXG1 JASPAR yes 118480758
chr1 232714497 232714505 FOXO3 JASPAR yes 118480759
chr1 232714497 232714506 SRY JASPAR yes 36173535
chr1 232714497 232714506 SRY JASPAR yes 118480760
chr1 232714497 232714510 HNF1B JASPAR yes 36173536
chr1 232714497 232714510 HNF1B JASPAR yes 118480761
chr1 232714498 232714508 PAX3 JASPAR yes 36173537
chr1 232714498 232714508 PAX7 JASPAR yes 36173538
chr1 232714498 232714508 PAX3 JASPAR yes 118480762
chr1 232714498 232714508 PAX7 JASPAR yes 118480763
chr1 232714500 232714509 VENTX JASPAR yes 36173539
chr1 232714500 232714509 VENTX JASPAR yes 118480764
chr1 232714501 232714509 BARX1 JASPAR yes 36173540
chr1 232714501 232714509 BARX1 JASPAR yes 118480765
chr1 232714522 232714525 MYB TRANSFAC yes 36173541
chr1 232714522 232714525 MYB TRANSFAC yes 118480766
chr1 232714532 232714547 FOXA1 JASPAR yes 36173542
chr1 232714532 232714547 FOXA1 JASPAR yes 118480767
chr1 232714533 232714539 TCF4 TRANSFAC yes 36173543
chr1 232714533 232714539 TCF4 TRANSFAC yes 118480768
chr1 232714533 232714548 FOXP1 JASPAR yes 36173544
chr1 232714533 232714548 FOXP1 JASPAR yes 118480769
chr1 232714534 232714543 SRY JASPAR yes 36173545
chr1 232714534 232714543 SRY JASPAR yes 118480770
chr1 232714534 232714545 FOXP2 JASPAR yes 36173546
chr1 232714534 232714545 FOXP2 JASPAR yes 118480771
chr1 232714534 232714546 FOXC2 JASPAR yes 36173547
chr1 232714534 232714546 FOXC2 JASPAR yes 118480772
chr1 232714534 232714548 FOXF2 JASPAR yes 36173548
chr1 232714534 232714548 FOXF2 JASPAR yes 118480773
chr1 232714535 232714543 FOXD1 JASPAR yes 36173549
chr1 232714535 232714543 FOXG1 JASPAR yes 36173550
chr1 232714535 232714543 FOXO3 JASPAR yes 36173551
chr1 232714535 232714543 FOXD1 JASPAR yes 118480774
chr1 232714535 232714543 FOXG1 JASPAR yes 118480775
chr1 232714535 232714543 FOXO3 JASPAR yes 118480776
chr1 232714535 232714546 FOXC1 JASPAR yes 36173552
chr1 232714535 232714546 FOXC1 JASPAR yes 118480777
chr1 232714536 232714543 FOXD2 JASPAR yes 36173553
chr1 232714536 232714543 FOXI1 JASPAR yes 36173554
chr1 232714536 232714543 FOXL1 JASPAR yes 36173555
chr1 232714536 232714543 FOXO4 JASPAR yes 36173556
chr1 232714536 232714543 FOXO6 JASPAR yes 36173557
chr1 232714536 232714543 FOXP3 JASPAR yes 36173558
chr1 232714536 232714543 FOXD2 JASPAR yes 118480778
chr1 232714536 232714543 FOXI1 JASPAR yes 118480779
chr1 232714536 232714543 FOXL1 JASPAR yes 118480780
chr1 232714536 232714543 FOXO4 JASPAR yes 118480781
chr1 232714536 232714543 FOXO6 JASPAR yes 118480782
chr1 232714536 232714543 FOXP3 JASPAR yes 118480783
chr1 232714536 232714547 FOXA1 JASPAR yes 36173559
chr1 232714536 232714547 FOXA1 JASPAR yes 118480784
chr1 232714540 232714555 STAT1 JASPAR yes 36173560
chr1 232714540 232714555 STAT1 JASPAR yes 118480785
chr1 232714543 232714564 IRF1 JASPAR yes 36173561
chr1 232714543 232714564 IRF1 JASPAR yes 118480786
chr1 232714545 232714556 FLI1 JASPAR yes 36173562
chr1 232714545 232714556 FLI1 JASPAR yes 118480787
chr1 232714547 232714561 STAT1 JASPAR yes 36173563
chr1 232714547 232714561 STAT1 JASPAR yes 118480788
chr1 232714547 232714562 STAT2 JASPAR yes 36173564
chr1 232714547 232714562 STAT2 JASPAR yes 118480789
chr1 232714551 232714556 ETS2 TRANSFAC yes 36173565
chr1 232714551 232714556 ETS2 TRANSFAC yes 118480790
chr1 232714554 232714569 RUNX2 JASPAR yes 36173566
chr1 232714554 232714569 RUNX2 JASPAR yes 118480791
chr1 232714555 232714564 RUNX2 JASPAR yes 36173567
chr1 232714555 232714564 RUNX2 JASPAR yes 118480792
chr1 232714555 232714565 RUNX3 JASPAR yes 36173568
chr1 232714555 232714565 RUNX3 JASPAR yes 118480793
chr1 232714555 232714566 RUNX1 JASPAR yes 36173569
chr1 232714555 232714566 RUNX1 JASPAR yes 118480794
chr1 232714559 232714567 HOXA5 JASPAR yes 36173570
chr1 232714559 232714567 HOXA5 JASPAR yes 118480795
chr1 232714568 232714577 NKX2-8 JASPAR yes 36173571
chr1 232714568 232714577 NKX2-8 JASPAR yes 118480796
chr1 232714601 232714618 BCL6B JASPAR yes 36173572
chr1 232714601 232714618 BCL6B JASPAR yes 118480797
chr1 232714602 232714606 YY1 TRANSFAC yes 36173573
chr1 232714602 232714606 YY1 TRANSFAC yes 118480798
chr1 232714603 232714611 FEV JASPAR yes 36173574
chr1 232714603 232714611 FEV JASPAR yes 118480799
chr1 232714614 232714623 SNAI2 JASPAR yes 36173575
chr1 232714614 232714623 SNAI2 JASPAR yes 118480800
chr1 232714614 232714624 FIGLA JASPAR yes 36173576
chr1 232714614 232714624 MSC JASPAR yes 36173577
chr1 232714614 232714624 TCF3 JASPAR yes 36173578
chr1 232714614 232714624 FIGLA JASPAR yes 118480801
chr1 232714614 232714624 MSC JASPAR yes 118480802
chr1 232714614 232714624 TCF3 JASPAR yes 118480803
chr1 232714625 232714638 JUN JASPAR yes 36173579
chr1 232714625 232714638 JUN JASPAR yes 118480804
chr1 232714626 232714639 ATF4 JASPAR yes 36173580
chr1 232714626 232714639 ATF4 JASPAR yes 118480805
chr1 232714647 232714651 YY1 TRANSFAC yes 36173581
chr1 232714647 232714651 YY1 TRANSFAC yes 118480806
chr1 232714682 232714688 HiNF-A TRANSFAC yes 36173582
chr1 232714682 232714688 HiNF-A TRANSFAC yes 118480807
SNP sites on vista5556[chr1:232714427-232714703]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 232714439 rs186138016 C T
MZF1
1030869
chr1 232714485 rs148558821 C A
FOXA1
1030870
chr1 232714531 rs191068171 G T no 1030871
Genes possibly regulated by vista5556[chr1:232714427-232714703]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 232533711 232697304 - SIPA1L2 ENSG00000116991.6 232697304 0.81 1.0 1955 82877
Expression level of Genes
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miRNAs possibly regulated by vista5556[chr1:232714427-232714703]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results