EnhancerDB
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  3. vista5560[chr1:232735038-232735290]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5560[chr1:232735038-232735290]
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Tissue distribution of vista5560
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Transcription factor that possibly regulate vista5560[chr1:232735038-232735290]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 232735052 232735376 CEBPB UCSC Txn Factor no Conserved 107879426
chr1 232735036 232735046 EMX1 JASPAR yes 36175855
chr1 232735036 232735046 HOXB3 JASPAR yes 36175856
chr1 232735036 232735046 NOTO JASPAR yes 36175857
chr1 232735036 232735046 EMX1 JASPAR yes 118480935
chr1 232735036 232735046 HOXB3 JASPAR yes 118480936
chr1 232735036 232735046 NOTO JASPAR yes 118480937
chr1 232735037 232735045 NKX6-1 JASPAR yes 36175858
chr1 232735037 232735045 NKX6-2 JASPAR yes 36175859
chr1 232735037 232735045 NKX6-1 JASPAR yes 118480938
chr1 232735037 232735045 NKX6-2 JASPAR yes 118480939
chr1 232735037 232735047 POU6F2 JASPAR yes 36175860
chr1 232735037 232735047 POU6F2 JASPAR yes 118480940
chr1 232735058 232735072 IRF7 JASPAR yes 36175861
chr1 232735058 232735072 IRF7 JASPAR yes 118480941
chr1 232735079 232735092 ZBTB18 JASPAR yes 36175862
chr1 232735079 232735092 ZBTB18 JASPAR yes 118480942
chr1 232735080 232735090 FIGLA JASPAR yes 36175863
chr1 232735080 232735090 ID4 JASPAR yes 36175864
chr1 232735080 232735090 MSC JASPAR yes 36175865
chr1 232735080 232735090 TCF3 JASPAR yes 36175866
chr1 232735080 232735090 TCF4 JASPAR yes 36175867
chr1 232735080 232735090 FIGLA JASPAR yes 118480943
chr1 232735080 232735090 ID4 JASPAR yes 118480944
chr1 232735080 232735090 MSC JASPAR yes 118480945
chr1 232735080 232735090 TCF3 JASPAR yes 118480946
chr1 232735080 232735090 TCF4 JASPAR yes 118480947
chr1 232735081 232735090 SNAI2 JASPAR yes 36175868
chr1 232735081 232735090 SNAI2 JASPAR yes 118480948
chr1 232735082 232735087 USF2 TRANSFAC yes 36175869
chr1 232735082 232735087 USF2 TRANSFAC yes 118480949
chr1 232735103 232735110 NKX3-1 JASPAR yes 36175870
chr1 232735103 232735110 NKX3-1 JASPAR yes 118480950
chr1 232735135 232735153 MAFF JASPAR yes 36175871
chr1 232735135 232735153 MAFF JASPAR yes 118480951
chr1 232735137 232735148 NRL JASPAR yes 36175872
chr1 232735137 232735148 NRL JASPAR yes 118480952
chr1 232735137 232735152 MAFK JASPAR yes 36175873
chr1 232735137 232735152 MAFK JASPAR yes 118480953
chr1 232735165 232735174 THAP1 JASPAR yes 36175874
chr1 232735165 232735174 THAP1 JASPAR yes 118480954
chr1 232735171 232735192 REST JASPAR yes 36175875
chr1 232735171 232735192 REST JASPAR yes 118480955
chr1 232735181 232735193 TFAP2C JASPAR yes 36175876
chr1 232735181 232735193 TFAP2C JASPAR yes 118480956
chr1 232735184 232735195 ESRRA JASPAR yes 36175877
chr1 232735184 232735195 ESRRB JASPAR yes 36175878
chr1 232735184 232735195 ESRRA JASPAR yes 118480957
chr1 232735184 232735195 ESRRB JASPAR yes 118480958
chr1 232735188 232735192 LFA1 TRANSFAC yes 36175879
chr1 232735188 232735192 LFA1 TRANSFAC yes 118480959
chr1 232735192 232735206 GATA2 JASPAR yes 36175880
chr1 232735192 232735206 GATA2 JASPAR yes 118480960
chr1 232735196 232735204 GATA3 JASPAR yes 36175881
chr1 232735196 232735204 GATA3 JASPAR yes 118480961
chr1 232735204 232735217 ELF1 JASPAR yes 36175882
chr1 232735204 232735217 ELF1 JASPAR yes 118480962
chr1 232735205 232735218 ELF3 JASPAR yes 36175883
chr1 232735205 232735218 ELF3 JASPAR yes 118480963
chr1 232735206 232735217 ELF5 JASPAR yes 36175884
chr1 232735206 232735217 ELF5 JASPAR yes 118480964
chr1 232735207 232735218 ELK4 JASPAR yes 36175885
chr1 232735207 232735218 FLI1 JASPAR yes 36175886
chr1 232735207 232735218 ELK4 JASPAR yes 118480965
chr1 232735207 232735218 FLI1 JASPAR yes 118480966
chr1 232735208 232735216 EHF JASPAR yes 36175887
chr1 232735208 232735216 FEV JASPAR yes 36175888
chr1 232735208 232735216 EHF JASPAR yes 118480967
chr1 232735208 232735216 FEV JASPAR yes 118480968
chr1 232735209 232735216 SPI1 JASPAR yes 36175889
chr1 232735209 232735216 SPI1 JASPAR yes 118480969
chr1 232735213 232735224 CEBPB JASPAR yes 36175890
chr1 232735213 232735224 CEBPB JASPAR yes 118480970
chr1 232735213 232735226 ATF4 JASPAR yes 36175891
chr1 232735213 232735226 ATF4 JASPAR yes 118480971
chr1 232735213 232735228 JUND JASPAR yes 36175892
chr1 232735213 232735228 JUND JASPAR yes 118480972
chr1 232735214 232735225 CEBPA JASPAR yes 36175893
chr1 232735214 232735225 CEBPA JASPAR yes 118480973
chr1 232735214 232735227 JUN JASPAR yes 36175894
chr1 232735214 232735227 JUN JASPAR yes 118480974
chr1 232735234 232735238 NFE TRANSFAC yes 36175895
chr1 232735234 232735238 NFE TRANSFAC yes 118480975
chr1 232735250 232735258 FOXO3 JASPAR yes 36175896
chr1 232735250 232735258 FOXO3 JASPAR yes 118480976
chr1 232735255 232735259 H1TF2 TRANSFAC yes 36175897
chr1 232735255 232735259 NFE TRANSFAC yes 36175898
chr1 232735255 232735259 SRF TRANSFAC yes 36175899
chr1 232735255 232735259 H1TF2 TRANSFAC yes 118480977
chr1 232735255 232735259 NFE TRANSFAC yes 118480978
chr1 232735255 232735259 SRF TRANSFAC yes 118480979
chr1 232735271 232735289 NFYA JASPAR yes 36175900
chr1 232735271 232735289 NFYA JASPAR yes 118480980
chr1 232735274 232735285 FOXH1 JASPAR yes 36175901
chr1 232735274 232735285 FOXH1 JASPAR yes 118480981
chr1 232735275 232735279 H1TF2 TRANSFAC yes 36175902
chr1 232735275 232735279 NFE TRANSFAC yes 36175903
chr1 232735275 232735279 SRF TRANSFAC yes 36175904
chr1 232735275 232735279 H1TF2 TRANSFAC yes 118480982
chr1 232735275 232735279 NFE TRANSFAC yes 118480983
chr1 232735275 232735279 SRF TRANSFAC yes 118480984
chr1 232735278 232735284 ZNF354C JASPAR yes 36175905
chr1 232735278 232735284 ZNF354C JASPAR yes 118480985
SNP sites on vista5560[chr1:232735038-232735290]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 232735234 rs4649274 G A
CEBPB NFE
1031134
Genes possibly regulated by vista5560[chr1:232735038-232735290]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 232533711 232697304 - SIPA1L2 ENSG00000116991.6 232697304 0.81 1.0 1955 62266
Expression level of Genes
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miRNAs possibly regulated by vista5560[chr1:232735038-232735290]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results