EnhancerDB
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  3. vista5562[chr1:232760730-232761090]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5562[chr1:232760730-232761090]
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Tissue distribution of vista5562
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Transcription factor that possibly regulate vista5562[chr1:232760730-232761090]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 232760716 232760731 ESR2 JASPAR yes 36178880
chr1 232760716 232760731 ESR2 JASPAR yes 118481050
chr1 232760747 232760758 BATF JASPAR yes 36178881
chr1 232760747 232760758 BATF JASPAR yes 118481051
chr1 232760752 232760756 YY1 TRANSFAC yes 36178882
chr1 232760752 232760756 YY1 TRANSFAC yes 118481052
chr1 232760752 232760765 EOMES JASPAR yes 36178883
chr1 232760752 232760765 EOMES JASPAR yes 118481053
chr1 232760754 232760764 TBR1 JASPAR yes 36178884
chr1 232760754 232760764 TBR1 JASPAR yes 118481054
chr1 232760754 232760765 TBX2 JASPAR yes 36178885
chr1 232760754 232760765 TBX2 JASPAR yes 118481055
chr1 232760755 232760765 TBX21 JASPAR yes 36178886
chr1 232760755 232760765 TBX21 JASPAR yes 118481056
chr1 232760756 232760759 MYB TRANSFAC yes 36178887
chr1 232760756 232760759 MYB TRANSFAC yes 118481057
chr1 232760761 232760765 YY1 TRANSFAC yes 36178888
chr1 232760761 232760765 YY1 TRANSFAC yes 118481058
chr1 232760789 232760808 RFX2 JASPAR yes 36178889
chr1 232760789 232760808 RFX2 JASPAR yes 118481059
chr1 232760800 232760815 AR JASPAR yes 36178890
chr1 232760800 232760815 AR JASPAR yes 118481060
chr1 232760818 232760828 POU6F2 JASPAR yes 36178891
chr1 232760818 232760828 POU6F2 JASPAR yes 118481061
chr1 232760822 232760826 YY1 TRANSFAC yes 36178892
chr1 232760822 232760826 YY1 TRANSFAC yes 118481062
chr1 232760825 232760843 MAFF JASPAR yes 36178893
chr1 232760825 232760843 MAFF JASPAR yes 118481063
chr1 232760826 232760837 NFE2L2 JASPAR yes 36178894
chr1 232760826 232760837 NFE2L2 JASPAR yes 118481064
chr1 232760826 232760841 MAFK JASPAR yes 36178895
chr1 232760826 232760841 MAFK JASPAR yes 118481065
chr1 232760830 232760841 NRL JASPAR yes 36178896
chr1 232760830 232760841 NRL JASPAR yes 118481066
chr1 232760835 232760849 RORA JASPAR yes 36178897
chr1 232760835 232760849 RORA JASPAR yes 118481067
chr1 232760837 232760840 MYB TRANSFAC yes 36178898
chr1 232760837 232760840 MYB TRANSFAC yes 118481068
chr1 232760843 232760847 ESR1 TRANSFAC yes 36178899
chr1 232760843 232760847 ESR1 TRANSFAC yes 118481069
chr1 232760884 232760889 GATA2 JASPAR yes 36178900
chr1 232760884 232760889 GATA2 JASPAR yes 118481070
chr1 232760887 232760892 GATA2 JASPAR yes 36178901
chr1 232760887 232760892 GATA2 JASPAR yes 118481071
chr1 232760922 232760926 TEAD2 TRANSFAC yes 36178902
chr1 232760922 232760926 TEAD2 TRANSFAC yes 118481072
chr1 232760938 232760942 YY1 TRANSFAC yes 36178903
chr1 232760938 232760942 YY1 TRANSFAC yes 118481073
chr1 232760939 232760952 HNF1B JASPAR yes 36178904
chr1 232760939 232760952 HNF1B JASPAR yes 118481074
chr1 232760940 232760952 HNF1B JASPAR yes 36178905
chr1 232760940 232760952 HNF1B JASPAR yes 118481075
chr1 232760942 232760952 HMBOX1 JASPAR yes 36178906
chr1 232760942 232760952 HMBOX1 JASPAR yes 118481076
chr1 232760948 232760951 MYB TRANSFAC yes 36178907
chr1 232760948 232760951 MYB TRANSFAC yes 118481077
chr1 232760952 232760956 TEAD2 TRANSFAC yes 36178908
chr1 232760952 232760956 TEAD2 TRANSFAC yes 118481078
chr1 232760954 232760957 MYB TRANSFAC yes 36178909
chr1 232760954 232760957 MYB TRANSFAC yes 118481079
chr1 232760978 232760990 TFAP2A JASPAR yes 36178910
chr1 232760978 232760990 TFAP2B JASPAR yes 36178911
chr1 232760978 232760990 TFAP2C JASPAR yes 36178912
chr1 232760978 232760990 TFAP2A JASPAR yes 118481080
chr1 232760978 232760990 TFAP2B JASPAR yes 118481081
chr1 232760978 232760990 TFAP2C JASPAR yes 118481082
chr1 232760986 232760991 ETS2 TRANSFAC yes 36178913
chr1 232760986 232760991 ETS2 TRANSFAC yes 118481083
chr1 232760987 232761002 HSF1 JASPAR yes 36178914
chr1 232760987 232761002 HSF1 JASPAR yes 118481084
chr1 232760988 232761001 HSF1 JASPAR yes 36178915
chr1 232760988 232761001 HSF2 JASPAR yes 36178916
chr1 232760988 232761001 HSF4 JASPAR yes 36178917
chr1 232760988 232761001 HSF1 JASPAR yes 118481085
chr1 232760988 232761001 HSF2 JASPAR yes 118481086
chr1 232760988 232761001 HSF4 JASPAR yes 118481087
chr1 232761020 232761035 MYBL2 JASPAR yes 36178918
chr1 232761020 232761035 MYBL2 JASPAR yes 118481088
chr1 232761025 232761034 SRY JASPAR yes 36178919
chr1 232761025 232761034 SRY JASPAR yes 118481089
chr1 232761027 232761030 MYB TRANSFAC yes 36178920
chr1 232761027 232761030 MYB TRANSFAC yes 118481090
chr1 232761029 232761042 DUXA JASPAR yes 36178921
chr1 232761029 232761042 DUXA JASPAR yes 118481091
chr1 232761030 232761041 DUX4 JASPAR yes 36178922
chr1 232761030 232761041 DUX4 JASPAR yes 118481092
chr1 232761031 232761042 CEBPB JASPAR yes 36178923
chr1 232761031 232761042 CEBPB JASPAR yes 118481093
chr1 232761031 232761044 ATF4 JASPAR yes 36178924
chr1 232761031 232761044 ATF4 JASPAR yes 118481094
chr1 232761032 232761043 CEBPA JASPAR yes 36178925
chr1 232761032 232761043 CEBPA JASPAR yes 118481095
chr1 232761032 232761045 JUN JASPAR yes 36178926
chr1 232761032 232761045 JUN JASPAR yes 118481096
chr1 232761047 232761054 NKX3-1 JASPAR yes 36178927
chr1 232761047 232761054 NKX3-1 JASPAR yes 118481097
chr1 232761047 232761058 FOXB1 JASPAR yes 36178928
chr1 232761047 232761058 FOXB1 JASPAR yes 118481098
chr1 232761057 232761061 TEAD2 TRANSFAC yes 36178929
chr1 232761057 232761061 TEAD2 TRANSFAC yes 118481099
chr1 232761057 232761062 TBP TRANSFAC yes 36178930
chr1 232761057 232761062 TBP TRANSFAC yes 118481100
chr1 232761057 232761063 TFIID TRANSFAC yes 36178931
chr1 232761057 232761063 TFIID TRANSFAC yes 118481101
chr1 232761069 232761080 PHOX2A JASPAR yes 36178932
chr1 232761069 232761080 PHOX2A JASPAR yes 118481102
chr1 232761081 232761099 MAFF JASPAR yes 36178933
chr1 232761081 232761099 MAFF JASPAR yes 118481103
SNP sites on vista5562[chr1:232760730-232761090]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 232760740 rs73099542 C G no 1031426
chr1 232760751 rs140048128 G A
BATF
1031427
chr1 232760779 rs77131607 G C,T no 1031428
chr1 232760795 rs74145307 G A
RFX2
1031429
chr1 232761082 rs140880933 G C
MAFF
1031430
Genes possibly regulated by vista5562[chr1:232760730-232761090]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 232533711 232697304 - SIPA1L2 ENSG00000116991.6 232697304 0.81 1.0 1955 36574
Expression level of Genes
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miRNAs possibly regulated by vista5562[chr1:232760730-232761090]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results