EnhancerDB
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  3. vista557[chr1:17495208-17495390]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista557[chr1:17495208-17495390]
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Tissue distribution of vista557
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Transcription factor that possibly regulate vista557[chr1:17495208-17495390]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 17495204 17495225 IRF1 JASPAR yes 27074039
chr1 17495204 17495225 IRF1 JASPAR yes 118240528
chr1 17495205 17495220 MEF2C JASPAR yes 27074040
chr1 17495205 17495220 MEF2C JASPAR yes 118240529
chr1 17495205 17495226 IRF1 JASPAR yes 27074041
chr1 17495205 17495226 IRF1 JASPAR yes 118240530
chr1 17495208 17495223 FOXP1 JASPAR yes 27074042
chr1 17495208 17495223 FOXP1 JASPAR yes 118240531
chr1 17495209 17495224 FOXP1 JASPAR yes 27074043
chr1 17495209 17495224 FOXP1 JASPAR yes 118240532
chr1 17495209 17495230 IRF1 JASPAR yes 27074044
chr1 17495209 17495230 IRF1 JASPAR yes 118240533
chr1 17495210 17495225 FOXP1 JASPAR yes 27074045
chr1 17495210 17495225 FOXP1 JASPAR yes 118240534
chr1 17495210 17495231 IRF1 JASPAR yes 27074046
chr1 17495210 17495231 IRF1 JASPAR yes 118240535
chr1 17495211 17495226 FOXP1 JASPAR yes 27074047
chr1 17495211 17495226 FOXP1 JASPAR yes 118240536
chr1 17495211 17495232 IRF1 JASPAR yes 27074048
chr1 17495211 17495232 IRF1 JASPAR yes 118240537
chr1 17495212 17495227 FOXP1 JASPAR yes 27074049
chr1 17495212 17495227 FOXP1 JASPAR yes 118240538
chr1 17495212 17495233 IRF1 JASPAR yes 27074050
chr1 17495212 17495233 IRF1 JASPAR yes 118240539
chr1 17495213 17495228 FOXP1 JASPAR yes 27074051
chr1 17495213 17495228 FOXP1 JASPAR yes 118240540
chr1 17495213 17495234 IRF1 JASPAR yes 27074052
chr1 17495213 17495234 IRF1 JASPAR yes 118240541
chr1 17495214 17495229 FOXP1 JASPAR yes 27074053
chr1 17495214 17495229 FOXP1 JASPAR yes 118240542
chr1 17495214 17495235 IRF1 JASPAR yes 27074054
chr1 17495214 17495235 IRF1 JASPAR yes 118240543
chr1 17495215 17495230 FOXP1 JASPAR yes 27074055
chr1 17495215 17495230 FOXP1 JASPAR yes 118240544
chr1 17495217 17495232 FOXP1 JASPAR yes 27074056
chr1 17495217 17495232 FOXP1 JASPAR yes 118240545
chr1 17495218 17495239 IRF1 JASPAR yes 27074057
chr1 17495218 17495239 IRF1 JASPAR yes 118240546
chr1 17495232 17495242 SMAD3 JASPAR yes 27074058
chr1 17495232 17495242 SMAD3 JASPAR yes 118240547
chr1 17495283 17495298 STAT1 JASPAR yes 27074059
chr1 17495283 17495298 STAT1 JASPAR yes 118240548
chr1 17495285 17495296 STAT1 JASPAR yes 27074060
chr1 17495285 17495296 STAT1 JASPAR yes 118240549
chr1 17495298 17495313 LEF1 JASPAR yes 27074061
chr1 17495298 17495313 LEF1 JASPAR yes 118240550
chr1 17495302 17495308 LEF1 TRANSFAC yes 27074062
chr1 17495302 17495308 SOX10 JASPAR yes 27074063
chr1 17495302 17495308 LEF1 TRANSFAC yes 118240551
chr1 17495302 17495308 SOX10 JASPAR yes 118240552
chr1 17495303 17495315 FOXC2 JASPAR yes 27074064
chr1 17495303 17495315 FOXC2 JASPAR yes 118240553
chr1 17495318 17495328 RUNX3 JASPAR yes 27074065
chr1 17495318 17495328 RUNX3 JASPAR yes 118240554
chr1 17495319 17495339 PPARG JASPAR yes 27074066
chr1 17495319 17495339 PPARG JASPAR yes 118240555
chr1 17495323 17495327 ESR1 TRANSFAC yes 27074067
chr1 17495323 17495327 ESR1 TRANSFAC yes 118240556
chr1 17495360 17495364 TEAD2 TRANSFAC yes 27074068
chr1 17495360 17495364 TEAD2 TRANSFAC yes 118240557
chr1 17495360 17495365 TBP TRANSFAC yes 27074069
chr1 17495360 17495365 TBP TRANSFAC yes 118240558
SNP sites on vista557[chr1:17495208-17495390]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 17495273 rs72643885 G A,C,T no 116295
chr1 17495299 rs141228061 A G
LEF1
116296
chr1 17495311 rs2501814 T A
FOXC2 LEF1
116297
chr1 17495333 rs72913636 C T
PPARG
116298
Genes possibly regulated by vista557[chr1:17495208-17495390]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 17393256 17445948 - PADI2 ENSG00000117115.8 17445948 0.86 1.0 241 50740
chr1 17531621 17572500 + PADI1 ENSG00000142623.8 17531621 1.0 0.97 242 63769
chr1 17575593 17610728 + PADI3 ENSG00000142619.4 17575593 0.97 0.99 243 19797
Expression level of Genes
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miRNAs possibly regulated by vista557[chr1:17495208-17495390]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results