EnhancerDB
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  3. vista5571[chr1:233472763-233473058]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5571[chr1:233472763-233473058]
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Tissue distribution of vista5571
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Transcription factor that possibly regulate vista5571[chr1:233472763-233473058]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 233472755 233472775 RREB1 JASPAR yes 36218463
chr1 233472755 233472775 RREB1 JASPAR yes 118481477
chr1 233472764 233472779 RUNX2 JASPAR yes 36218464
chr1 233472764 233472779 RUNX2 JASPAR yes 118481478
chr1 233472766 233472770 YY1 TRANSFAC yes 36218465
chr1 233472766 233472770 YY1 TRANSFAC yes 118481479
chr1 233472767 233472778 RUNX1 JASPAR yes 36218466
chr1 233472767 233472778 RUNX1 JASPAR yes 118481480
chr1 233472790 233472794 NFE TRANSFAC yes 36218467
chr1 233472790 233472794 NFE TRANSFAC yes 118481481
chr1 233472790 233472803 SMAD2 JASPAR yes 36218468
chr1 233472790 233472803 SMAD2 JASPAR yes 118481482
chr1 233472816 233472828 CREB1 JASPAR yes 36218469
chr1 233472816 233472828 CREB1 JASPAR yes 118481483
chr1 233472818 233472832 BATF3 JASPAR yes 36218470
chr1 233472818 233472832 BATF3 JASPAR yes 118481484
chr1 233472820 233472830 SREBF1 JASPAR yes 36218471
chr1 233472820 233472830 SREBF1 JASPAR yes 118481485
chr1 233472821 233472826 ATF1 TRANSFAC yes 36218472
chr1 233472821 233472826 ATF1 TRANSFAC yes 118481486
chr1 233472827 233472837 GSC2 JASPAR yes 36218473
chr1 233472827 233472837 GSC JASPAR yes 36218474
chr1 233472827 233472837 GSC2 JASPAR yes 118481487
chr1 233472827 233472837 GSC JASPAR yes 118481488
chr1 233472828 233472836 OTX1 JASPAR yes 36218475
chr1 233472828 233472836 OTX2 JASPAR yes 36218476
chr1 233472828 233472836 OTX1 JASPAR yes 118481489
chr1 233472828 233472836 OTX2 JASPAR yes 118481490
chr1 233472828 233472837 PITX3 JASPAR yes 36218477
chr1 233472828 233472837 PITX3 JASPAR yes 118481491
chr1 233472849 233472861 INSM1 JASPAR yes 36218478
chr1 233472849 233472861 INSM1 JASPAR yes 118481492
chr1 233472884 233472889 GATA2 JASPAR yes 36218479
chr1 233472884 233472889 GATA2 JASPAR yes 118481493
chr1 233472910 233472922 BHLHE23 JASPAR yes 36218480
chr1 233472910 233472922 BHLHE23 JASPAR yes 118481494
chr1 233472911 233472921 BHLHE22 JASPAR yes 36218481
chr1 233472911 233472921 NEUROD2 JASPAR yes 36218482
chr1 233472911 233472921 OLIG1 JASPAR yes 36218483
chr1 233472911 233472921 OLIG2 JASPAR yes 36218484
chr1 233472911 233472921 OLIG3 JASPAR yes 36218485
chr1 233472911 233472921 BHLHE22 JASPAR yes 118481495
chr1 233472911 233472921 NEUROD2 JASPAR yes 118481496
chr1 233472911 233472921 OLIG1 JASPAR yes 118481497
chr1 233472911 233472921 OLIG2 JASPAR yes 118481498
chr1 233472911 233472921 OLIG3 JASPAR yes 118481499
chr1 233472911 233472923 TAL1 JASPAR yes 36218486
chr1 233472911 233472923 TAL1 JASPAR yes 118481500
chr1 233472973 233472985 POU2F1 JASPAR yes 36218487
chr1 233472973 233472985 POU2F1 JASPAR yes 118481501
chr1 233472973 233472987 POU1F1 JASPAR yes 36218488
chr1 233472973 233472987 POU1F1 JASPAR yes 118481502
chr1 233472973 233472988 FOXP1 JASPAR yes 36218489
chr1 233472973 233472988 FOXP1 JASPAR yes 118481503
chr1 233472974 233472985 FOXA1 JASPAR yes 36218490
chr1 233472974 233472985 FOXA1 JASPAR yes 118481504
chr1 233472974 233472989 FOXA1 JASPAR yes 36218491
chr1 233472974 233472989 FOXA1 JASPAR yes 118481505
chr1 233472975 233472983 FOXL1 JASPAR yes 36218492
chr1 233472975 233472983 FOXL1 JASPAR yes 118481506
chr1 233472975 233472986 FOXB1 JASPAR yes 36218493
chr1 233472975 233472986 FOXC1 JASPAR yes 36218494
chr1 233472975 233472986 FOXB1 JASPAR yes 118481507
chr1 233472975 233472986 FOXC1 JASPAR yes 118481508
chr1 233472975 233472987 FOXC2 JASPAR yes 36218495
chr1 233472975 233472987 FOXC2 JASPAR yes 118481509
chr1 233472976 233472987 FOXP2 JASPAR yes 36218496
chr1 233472976 233472987 FOXP2 JASPAR yes 118481510
chr1 233472977 233472985 FOXO3 JASPAR yes 36218497
chr1 233472977 233472985 FOXO3 JASPAR yes 118481511
chr1 233472978 233472985 FOXD2 JASPAR yes 36218498
chr1 233472978 233472985 FOXI1 JASPAR yes 36218499
chr1 233472978 233472985 FOXL1 JASPAR yes 36218500
chr1 233472978 233472985 FOXO4 JASPAR yes 36218501
chr1 233472978 233472985 FOXO6 JASPAR yes 36218502
chr1 233472978 233472985 FOXP3 JASPAR yes 36218503
chr1 233472978 233472985 FOXD2 JASPAR yes 118481512
chr1 233472978 233472985 FOXI1 JASPAR yes 118481513
chr1 233472978 233472985 FOXL1 JASPAR yes 118481514
chr1 233472978 233472985 FOXO4 JASPAR yes 118481515
chr1 233472978 233472985 FOXO6 JASPAR yes 118481516
chr1 233472978 233472985 FOXP3 JASPAR yes 118481517
chr1 233472978 233472986 FOXD1 JASPAR yes 36218504
chr1 233472978 233472986 FOXG1 JASPAR yes 36218505
chr1 233472978 233472986 FOXO3 JASPAR yes 36218506
chr1 233472978 233472986 FOXD1 JASPAR yes 118481518
chr1 233472978 233472986 FOXG1 JASPAR yes 118481519
chr1 233472978 233472986 FOXO3 JASPAR yes 118481520
chr1 233472978 233472987 SRY JASPAR yes 36218507
chr1 233472978 233472987 SRY JASPAR yes 118481521
chr1 233472993 233473007 TLX1 JASPAR yes 36218508
chr1 233472993 233473007 TLX1 JASPAR yes 118481522
chr1 233473001 233473012 CDX2 JASPAR yes 36218509
chr1 233473001 233473012 CDX2 JASPAR yes 118481523
chr1 233473002 233473013 HOXA10 JASPAR yes 36218510
chr1 233473002 233473013 HOXA10 JASPAR yes 118481524
chr1 233473003 233473007 H1TF2 TRANSFAC yes 36218511
chr1 233473003 233473007 NFE TRANSFAC yes 36218512
chr1 233473003 233473007 SRF TRANSFAC yes 36218513
chr1 233473003 233473007 H1TF2 TRANSFAC yes 118481525
chr1 233473003 233473007 NFE TRANSFAC yes 118481526
chr1 233473003 233473007 SRF TRANSFAC yes 118481527
chr1 233473003 233473012 CDX1 JASPAR yes 36218514
chr1 233473003 233473012 CDX1 JASPAR yes 118481528
chr1 233473003 233473013 HOXA13 JASPAR yes 36218515
chr1 233473003 233473013 HOXB13 JASPAR yes 36218516
chr1 233473003 233473013 HOXD13 JASPAR yes 36218517
chr1 233473003 233473013 HOXA13 JASPAR yes 118481529
chr1 233473003 233473013 HOXB13 JASPAR yes 118481530
chr1 233473003 233473013 HOXD13 JASPAR yes 118481531
chr1 233473011 233473026 FOXA1 JASPAR yes 36218518
chr1 233473011 233473026 FOXA1 JASPAR yes 118481532
chr1 233473012 233473027 FOXP1 JASPAR yes 36218519
chr1 233473012 233473027 FOXP1 JASPAR yes 118481533
chr1 233473013 233473025 FOXC2 JASPAR yes 36218520
chr1 233473013 233473025 FOXC2 JASPAR yes 118481534
chr1 233473014 233473025 FOXB1 JASPAR yes 36218521
chr1 233473014 233473025 FOXC1 JASPAR yes 36218522
chr1 233473014 233473025 FOXB1 JASPAR yes 118481535
chr1 233473014 233473025 FOXC1 JASPAR yes 118481536
chr1 233473015 233473019 YY1 TRANSFAC yes 36218523
chr1 233473015 233473019 YY1 TRANSFAC yes 118481537
chr1 233473021 233473037 SOX4 JASPAR yes 36218524
chr1 233473021 233473037 SOX4 JASPAR yes 118481538
chr1 233473022 233473037 SOX21 JASPAR yes 36218525
chr1 233473022 233473037 SOX21 JASPAR yes 118481539
chr1 233473042 233473057 TFAP2A JASPAR yes 36218526
chr1 233473042 233473057 TFAP2A JASPAR yes 118481540
SNP sites on vista5571[chr1:233472763-233473058]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 233472803 rs142524878 A G
SMAD2
1035322
chr1 233472843 rs1294283 C T no 1035323
chr1 233472914 rs79751560 C T
BHLHE22 BHLHE23 NEUROD2 OLIG1 OLIG2 OLIG3 TAL1
1035324
chr1 233472976 rs566907248 T C
FOXA1 FOXB1 FOXC1 FOXC2 FOXL1 FOXP1 FOXP2 POU1F1 POU2F1
1035325
Genes possibly regulated by vista5571[chr1:233472763-233473058]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 233119181 233431459 - PCNXL2 ENSG00000135749.14 233431459 0.84 1.0 1958 58696
chr1 233463514 233520894 + MLK4 ENSG00000143674.6 233463514 0.92 1.0 1959 90751
Expression level of Genes
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miRNAs possibly regulated by vista5571[chr1:233472763-233473058]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results