EnhancerDB
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  3. vista5575[chr1:233750790-233751092]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5575[chr1:233750790-233751092]
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Tissue distribution of vista5575
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Transcription factor that possibly regulate vista5575[chr1:233750790-233751092]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 233749165 233751091 POLR2A UCSC Txn Factor no Conserved 107879578
chr1 233750798 233750819 REST JASPAR yes 118481643
chr1 233750799 233750818 REST JASPAR yes 118481644
chr1 233750847 233750859 ZBTB7B JASPAR yes 118481645
chr1 233750847 233750859 ZBTB7C JASPAR yes 118481646
chr1 233750860 233750874 ATF7 JASPAR yes 118481647
chr1 233750861 233750873 JDP2 JASPAR yes 118481648
chr1 233750861 233750876 JUND JASPAR yes 118481649
chr1 233750862 233750875 JUN JASPAR yes 118481650
chr1 233750863 233750870 JUN TRANSFAC yes 118481651
chr1 233750880 233750891 EBF1 JASPAR yes 36231383
chr1 233750880 233750891 EBF1 JASPAR yes 118481652
chr1 233750881 233750892 USF1 JASPAR yes 36231384
chr1 233750881 233750892 USF2 JASPAR yes 36231385
chr1 233750881 233750892 USF1 JASPAR yes 118481653
chr1 233750881 233750892 USF2 JASPAR yes 118481654
chr1 233750883 233750896 NR2F1 JASPAR yes 36231386
chr1 233750883 233750896 NR2F1 JASPAR yes 118481655
chr1 233750886 233750894 NR4A2 JASPAR yes 36231387
chr1 233750886 233750894 NR4A2 JASPAR yes 118481656
chr1 233750895 233750900 SP1 TRANSFAC yes 36231388
chr1 233750895 233750900 SP1 TRANSFAC yes 118481657
chr1 233750908 233750918 TFCP2 JASPAR yes 36231389
chr1 233750908 233750918 TFCP2 JASPAR yes 118481658
chr1 233750924 233750945 ZNF263 JASPAR yes 36231390
chr1 233750924 233750945 ZNF263 JASPAR yes 118481659
chr1 233750930 233750936 PEA3 TRANSFAC yes 36231391
chr1 233750930 233750936 PEA3 TRANSFAC yes 118481660
chr1 233750930 233750940 SP1 JASPAR yes 36231392
chr1 233750930 233750940 SP1 JASPAR yes 118481661
chr1 233750930 233750951 ZNF263 JASPAR yes 36231393
chr1 233750930 233750951 ZNF263 JASPAR yes 118481662
chr1 233750931 233750939 EHF JASPAR yes 36231394
chr1 233750931 233750939 EHF JASPAR yes 118481663
chr1 233750931 233750952 ZNF263 JASPAR yes 36231395
chr1 233750931 233750952 ZNF263 JASPAR yes 118481664
chr1 233750937 233750954 RXRA JASPAR yes 36231396
chr1 233750937 233750954 RXRA JASPAR yes 118481665
chr1 233750937 233750958 ZNF263 JASPAR yes 36231397
chr1 233750937 233750958 ZNF263 JASPAR yes 118481666
chr1 233750938 233750953 PRDM1 JASPAR yes 36231398
chr1 233750938 233750953 PRDM1 JASPAR yes 118481667
chr1 233750952 233750957 ETS2 TRANSFAC yes 36231399
chr1 233750952 233750957 ETS2 TRANSFAC yes 118481668
chr1 233750965 233750976 CEBPA JASPAR yes 36231400
chr1 233750965 233750976 CEBPA JASPAR yes 118481669
chr1 233750981 233750991 ALX3 JASPAR yes 36231401
chr1 233750981 233750991 EN2 JASPAR yes 36231402
chr1 233750981 233750991 ESX1 JASPAR yes 36231403
chr1 233750981 233750991 GBX2 JASPAR yes 36231404
chr1 233750981 233750991 GSX1 JASPAR yes 36231405
chr1 233750981 233750991 GSX2 JASPAR yes 36231406
chr1 233750981 233750991 LBX2 JASPAR yes 36231407
chr1 233750981 233750991 LHX2 JASPAR yes 36231408
chr1 233750981 233750991 ALX3 JASPAR yes 118481670
chr1 233750981 233750991 EN2 JASPAR yes 118481671
chr1 233750981 233750991 ESX1 JASPAR yes 118481672
chr1 233750981 233750991 GBX2 JASPAR yes 118481673
chr1 233750981 233750991 GSX1 JASPAR yes 118481674
chr1 233750981 233750991 GSX2 JASPAR yes 118481675
chr1 233750981 233750991 LBX2 JASPAR yes 118481676
chr1 233750981 233750991 LHX2 JASPAR yes 118481677
chr1 233750982 233750990 BARX1 JASPAR yes 36231409
chr1 233750982 233750990 BSX JASPAR yes 36231410
chr1 233750982 233750990 DLX6 JASPAR yes 36231411
chr1 233750982 233750990 ISX JASPAR yes 36231412
chr1 233750982 233750990 LBX1 JASPAR yes 36231413
chr1 233750982 233750990 LHX9 JASPAR yes 36231414
chr1 233750982 233750990 MSX1 JASPAR yes 36231415
chr1 233750982 233750990 MSX2 JASPAR yes 36231416
chr1 233750982 233750990 NKX6-2 JASPAR yes 36231417
chr1 233750982 233750990 PRRX1 JASPAR yes 36231418
chr1 233750982 233750990 RAX2 JASPAR yes 36231419
chr1 233750982 233750990 SHOX JASPAR yes 36231420
chr1 233750982 233750990 UNCX JASPAR yes 36231421
chr1 233750982 233750990 BARX1 JASPAR yes 118481678
chr1 233750982 233750990 BSX JASPAR yes 118481679
chr1 233750982 233750990 DLX6 JASPAR yes 118481680
chr1 233750982 233750990 ISX JASPAR yes 118481681
chr1 233750982 233750990 LBX1 JASPAR yes 118481682
chr1 233750982 233750990 LHX9 JASPAR yes 118481683
chr1 233750982 233750990 MSX1 JASPAR yes 118481684
chr1 233750982 233750990 MSX2 JASPAR yes 118481685
chr1 233750982 233750990 NKX6-2 JASPAR yes 118481686
chr1 233750982 233750990 PRRX1 JASPAR yes 118481687
chr1 233750982 233750990 RAX2 JASPAR yes 118481688
chr1 233750982 233750990 SHOX JASPAR yes 118481689
chr1 233750982 233750990 UNCX JASPAR yes 118481690
chr1 233750987 233751005 ESR2 JASPAR yes 36231422
chr1 233750987 233751005 ESR2 JASPAR yes 118481691
chr1 233750988 233751003 ESR2 JASPAR yes 36231423
chr1 233750988 233751003 ESR2 JASPAR yes 118481692
chr1 233750989 233750993 LFA1 TRANSFAC yes 36231424
chr1 233750989 233750993 LFA1 TRANSFAC yes 118481693
chr1 233750990 233751011 MAFG JASPAR yes 36231425
chr1 233750990 233751011 MAFG JASPAR yes 118481694
chr1 233750995 233751013 MAFF JASPAR yes 36231426
chr1 233750995 233751013 MAFF JASPAR yes 118481695
chr1 233750996 233751007 NFE2L2 JASPAR yes 36231427
chr1 233750996 233751007 NFE2L2 JASPAR yes 118481696
chr1 233750996 233751011 MAFK JASPAR yes 36231428
chr1 233750996 233751011 MAFK JASPAR yes 118481697
chr1 233751008 233751013 ETS2 TRANSFAC yes 36231429
chr1 233751008 233751013 ETS2 TRANSFAC yes 118481698
chr1 233751033 233751043 MZF1 JASPAR yes 36231430
chr1 233751033 233751043 MZF1 JASPAR yes 118481699
chr1 233751034 233751040 MZF1 JASPAR yes 36231431
chr1 233751034 233751040 MZF1 JASPAR yes 118481700
chr1 233751036 233751046 HOXA13 JASPAR yes 36231432
chr1 233751036 233751046 HOXB13 JASPAR yes 36231433
chr1 233751036 233751046 HOXD13 JASPAR yes 36231434
chr1 233751036 233751046 HOXA13 JASPAR yes 118481701
chr1 233751036 233751046 HOXB13 JASPAR yes 118481702
chr1 233751036 233751046 HOXD13 JASPAR yes 118481703
chr1 233751050 233751064 XBP1 JASPAR yes 36231435
chr1 233751050 233751064 XBP1 JASPAR yes 118481704
chr1 233751051 233751065 CREB3 JASPAR yes 36231436
chr1 233751051 233751065 CREB3L1 JASPAR yes 36231437
chr1 233751051 233751065 CREB3 JASPAR yes 118481705
chr1 233751051 233751065 CREB3L1 JASPAR yes 118481706
chr1 233751054 233751066 HINFP JASPAR yes 36231438
chr1 233751054 233751066 HINFP JASPAR yes 118481707
chr1 233751059 233751073 PLAG1 JASPAR yes 36231439
chr1 233751059 233751073 PLAG1 JASPAR yes 118481708
SNP sites on vista5575[chr1:233750790-233751092]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 233750809 rs13374926 T C
POLR2A REST
1037024
chr1 233750835 rs545387911 C T
POLR2A
1037025
chr1 233750929 rs139643753 T C
POLR2A ZNF263
1037026
chr1 233750948 rs13375171 G C
POLR2A PRDM1 RXRA ZNF263
1037027
chr1 233751023 rs1165434 G A
POLR2A
1037028
Genes possibly regulated by vista5575[chr1:233750790-233751092]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 233749750 233808258 + KCNK1 ENSG00000135750.10 233749750 0.7 1.0 1960 98960
Expression level of Genes
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miRNAs possibly regulated by vista5575[chr1:233750790-233751092]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results