EnhancerDB
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  3. vista5578[chr1:233809261-233809638]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5578[chr1:233809261-233809638]
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Tissue distribution of vista5578
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Transcription factor that possibly regulate vista5578[chr1:233809261-233809638]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 233809448 233809732 EBF1 UCSC Txn Factor no Conserved 107879618
chr1 233809273 233809283 MSC JASPAR yes 36233042
chr1 233809273 233809283 MSC JASPAR yes 118481744
chr1 233809289 233809292 MYB TRANSFAC yes 36233043
chr1 233809289 233809292 MYB TRANSFAC yes 118481745
chr1 233809289 233809304 LEF1 JASPAR yes 36233044
chr1 233809289 233809304 LEF1 JASPAR yes 118481746
chr1 233809295 233809306 E2F6 JASPAR yes 36233045
chr1 233809295 233809306 E2F6 JASPAR yes 118481747
chr1 233809299 233809304 ETS2 TRANSFAC yes 36233046
chr1 233809299 233809304 ETS2 TRANSFAC yes 118481748
chr1 233809301 233809315 TCF7L2 JASPAR yes 36233047
chr1 233809301 233809315 TCF7L2 JASPAR yes 118481749
chr1 233809301 233809316 HNF4G JASPAR yes 36233048
chr1 233809301 233809316 LEF1 JASPAR yes 36233049
chr1 233809301 233809316 NR2C2 JASPAR yes 36233050
chr1 233809301 233809316 HNF4G JASPAR yes 118481750
chr1 233809301 233809316 LEF1 JASPAR yes 118481751
chr1 233809301 233809316 NR2C2 JASPAR yes 118481752
chr1 233809302 233809316 NR2F1 JASPAR yes 36233051
chr1 233809302 233809316 RXRB JASPAR yes 36233052
chr1 233809302 233809316 RXRG JASPAR yes 36233053
chr1 233809302 233809316 NR2F1 JASPAR yes 118481753
chr1 233809302 233809316 RXRB JASPAR yes 118481754
chr1 233809302 233809316 RXRG JASPAR yes 118481755
chr1 233809302 233809317 HNF4A JASPAR yes 36233054
chr1 233809302 233809317 HNF4A JASPAR yes 118481756
chr1 233809305 233809311 TCF1 TRANSFAC yes 36233055
chr1 233809305 233809311 TCF1 TRANSFAC yes 118481757
chr1 233809317 233809331 SPI1 JASPAR yes 36233056
chr1 233809317 233809331 SPIC JASPAR yes 36233057
chr1 233809317 233809331 SPI1 JASPAR yes 118481758
chr1 233809317 233809331 SPIC JASPAR yes 118481759
chr1 233809318 233809331 ELF1 JASPAR yes 36233058
chr1 233809318 233809331 ELF1 JASPAR yes 118481760
chr1 233809318 233809339 ZNF263 JASPAR yes 36233059
chr1 233809318 233809339 ZNF263 JASPAR yes 118481761
chr1 233809319 233809331 EHF JASPAR yes 36233060
chr1 233809319 233809331 ELF4 JASPAR yes 36233061
chr1 233809319 233809331 EHF JASPAR yes 118481762
chr1 233809319 233809331 ELF4 JASPAR yes 118481763
chr1 233809319 233809332 ELF3 JASPAR yes 36233062
chr1 233809319 233809332 ELF3 JASPAR yes 118481764
chr1 233809320 233809331 ELF5 JASPAR yes 36233063
chr1 233809320 233809331 ELF5 JASPAR yes 118481765
chr1 233809321 233809331 ETV6 JASPAR yes 36233064
chr1 233809321 233809331 ETV6 JASPAR yes 118481766
chr1 233809321 233809342 ZNF263 JASPAR yes 36233065
chr1 233809321 233809342 ZNF263 JASPAR yes 118481767
chr1 233809322 233809330 EHF JASPAR yes 36233066
chr1 233809322 233809330 EHF JASPAR yes 118481768
chr1 233809323 233809330 SPI1 JASPAR yes 36233067
chr1 233809323 233809330 SPI1 JASPAR yes 118481769
chr1 233809347 233809353 JUN TRANSFAC yes 36233068
chr1 233809347 233809353 JUN TRANSFAC yes 118481770
chr1 233809357 233809373 POU4F3 JASPAR yes 36233069
chr1 233809357 233809373 POU4F3 JASPAR yes 118481771
chr1 233809359 233809374 HNF1A JASPAR yes 36233070
chr1 233809359 233809374 HNF1A JASPAR yes 118481772
chr1 233809360 233809373 HNF1B JASPAR yes 36233071
chr1 233809360 233809373 HNF1B JASPAR yes 118481773
chr1 233809360 233809374 POU4F1 JASPAR yes 36233072
chr1 233809360 233809374 POU4F1 JASPAR yes 118481774
chr1 233809360 233809376 POU4F3 JASPAR yes 36233073
chr1 233809360 233809376 POU4F3 JASPAR yes 118481775
chr1 233809361 233809373 HNF1B JASPAR yes 36233074
chr1 233809361 233809373 HNF1B JASPAR yes 118481776
chr1 233809365 233809372 NKX3-1 JASPAR yes 36233075
chr1 233809365 233809372 NKX3-1 JASPAR yes 118481777
chr1 233809381 233809388 NKX3-1 JASPAR yes 36233076
chr1 233809381 233809388 NKX3-1 JASPAR yes 118481778
chr1 233809385 233809395 MEF2A JASPAR yes 36233077
chr1 233809385 233809395 MEF2A JASPAR yes 118481779
chr1 233809421 233809425 YY1 TRANSFAC yes 36233078
chr1 233809421 233809425 YY1 TRANSFAC yes 118481780
chr1 233809425 233809441 ZNF143 JASPAR yes 36233079
chr1 233809425 233809441 ZNF143 JASPAR yes 118481781
chr1 233809432 233809443 ESRRB JASPAR yes 36233080
chr1 233809432 233809443 ESRRB JASPAR yes 118481782
chr1 233809457 233809468 ESRRB JASPAR yes 36233081
chr1 233809457 233809468 ESRRB JASPAR yes 118481783
chr1 233809461 233809465 LFA1 TRANSFAC yes 36233082
chr1 233809461 233809465 LFA1 TRANSFAC yes 118481784
chr1 233809510 233809531 ZNF263 JASPAR yes 36233083
chr1 233809510 233809531 ZNF263 JASPAR yes 118481785
chr1 233809527 233809534 PEA3 TRANSFAC yes 36233084
chr1 233809527 233809534 PEA3 TRANSFAC yes 118481786
chr1 233809535 233809549 EBF1 JASPAR yes 36233085
chr1 233809535 233809549 EBF1 JASPAR yes 118481787
chr1 233809536 233809547 EBF1 JASPAR yes 36233086
chr1 233809536 233809547 EBF1 JASPAR yes 118481788
chr1 233809537 233809543 MZF1 JASPAR yes 36233087
chr1 233809537 233809543 MZF1 JASPAR yes 118481789
chr1 233809540 233809561 IRF1 JASPAR yes 36233088
chr1 233809540 233809561 IRF1 JASPAR yes 118481790
chr1 233809542 233809557 STAT2 JASPAR yes 36233089
chr1 233809542 233809557 STAT2 JASPAR yes 118481791
chr1 233809543 233809557 STAT1 JASPAR yes 36233090
chr1 233809543 233809557 STAT1 JASPAR yes 118481792
chr1 233809571 233809582 ESRRA JASPAR yes 36233091
chr1 233809571 233809582 ESRRA JASPAR yes 118481793
chr1 233809572 233809587 HNF4A JASPAR yes 36233092
chr1 233809572 233809587 HNF4A JASPAR yes 118481794
chr1 233809573 233809588 HNF4G JASPAR yes 36233093
chr1 233809573 233809588 HNF4G JASPAR yes 118481795
chr1 233809579 233809594 RFX5 JASPAR yes 36233094
chr1 233809579 233809594 RFX5 JASPAR yes 118481796
chr1 233809581 233809585 H4TF2 TRANSFAC yes 36233095
chr1 233809581 233809585 H4TF2 TRANSFAC yes 118481797
chr1 233809581 233809595 EBF1 JASPAR yes 36233096
chr1 233809581 233809595 EBF1 JASPAR yes 118481798
chr1 233809582 233809593 EBF1 JASPAR yes 36233097
chr1 233809582 233809593 EBF1 JASPAR yes 118481799
chr1 233809583 233809589 MZF1 JASPAR yes 36233098
chr1 233809583 233809589 MZF1 JASPAR yes 118481800
chr1 233809599 233809610 NFE2L2 JASPAR yes 36233099
chr1 233809599 233809610 NFE2L2 JASPAR yes 118481801
chr1 233809604 233809608 ESR1 TRANSFAC yes 36233100
chr1 233809604 233809608 ESR1 TRANSFAC yes 118481802
chr1 233809617 233809631 RORA JASPAR yes 36233101
chr1 233809617 233809631 RORA JASPAR yes 118481803
chr1 233809623 233809629 ESR1 TRANSFAC yes 36233102
chr1 233809623 233809629 ESR1 TRANSFAC yes 118481804
chr1 233809625 233809629 ESR1 TRANSFAC yes 36233103
chr1 233809625 233809629 ESR1 TRANSFAC yes 118481805
SNP sites on vista5578[chr1:233809261-233809638]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 233809268 rs545109698 G A no 1037230
chr1 233809392 rs77786209 T G
MEF2A
1037231
chr1 233809513 rs115887954 G T
EBF1 ZNF263
1037232
chr1 233809528 rs114240615 G C
EBF1 PEA3 ZNF263
1037233
chr1 233809547 rs77298482 T C
EBF1 IRF1 STAT1 STAT2
1037234
chr1 233809566 rs116690273 G A
EBF1
1037235
Genes possibly regulated by vista5578[chr1:233809261-233809638]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 233749750 233808258 + KCNK1 ENSG00000135750.10 233749750 0.7 1.0 1960 40489
Expression level of Genes
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miRNAs possibly regulated by vista5578[chr1:233809261-233809638]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results