EnhancerDB
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  3. vista5579[chr1:233811305-233811449]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5579[chr1:233811305-233811449]
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Tissue distribution of vista5579
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Transcription factor that possibly regulate vista5579[chr1:233811305-233811449]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 233811315 233811328 SCRT2 JASPAR yes 36233305
chr1 233811315 233811328 SCRT2 JASPAR yes 118481806
chr1 233811322 233811330 TBX5 JASPAR yes 36233306
chr1 233811322 233811330 TBX5 JASPAR yes 118481807
chr1 233811331 233811341 HOXA13 JASPAR yes 36233307
chr1 233811331 233811341 HOXB13 JASPAR yes 36233308
chr1 233811331 233811341 HOXD13 JASPAR yes 36233309
chr1 233811331 233811341 HOXA13 JASPAR yes 118481808
chr1 233811331 233811341 HOXB13 JASPAR yes 118481809
chr1 233811331 233811341 HOXD13 JASPAR yes 118481810
chr1 233811338 233811343 SP1 TRANSFAC yes 36233310
chr1 233811338 233811343 SP1 TRANSFAC yes 118481811
chr1 233811357 233811373 SOX4 JASPAR yes 36233311
chr1 233811357 233811373 SOX4 JASPAR yes 118481812
chr1 233811361 233811377 SOX4 JASPAR yes 36233312
chr1 233811361 233811377 SOX4 JASPAR yes 118481813
chr1 233811366 233811378 PBX1 JASPAR yes 36233313
chr1 233811366 233811378 PBX1 JASPAR yes 118481814
chr1 233811371 233811386 NFYB JASPAR yes 36233314
chr1 233811371 233811386 NFYB JASPAR yes 118481815
chr1 233811373 233811378 NFY TRANSFAC yes 36233315
chr1 233811373 233811378 NFY TRANSFAC yes 118481816
chr1 233811390 233811394 YY1 TRANSFAC yes 36233316
chr1 233811390 233811394 YY1 TRANSFAC yes 118481817
chr1 233811397 233811407 ALX3 JASPAR yes 36233317
chr1 233811397 233811407 MIXL1 JASPAR yes 36233318
chr1 233811397 233811407 ALX3 JASPAR yes 118481818
chr1 233811397 233811407 MIXL1 JASPAR yes 118481819
chr1 233811398 233811406 ISX JASPAR yes 36233319
chr1 233811398 233811406 LHX9 JASPAR yes 36233320
chr1 233811398 233811406 LMX1B JASPAR yes 36233321
chr1 233811398 233811406 PRRX1 JASPAR yes 36233322
chr1 233811398 233811406 RAX2 JASPAR yes 36233323
chr1 233811398 233811406 SHOX JASPAR yes 36233324
chr1 233811398 233811406 UNCX JASPAR yes 36233325
chr1 233811398 233811406 ISX JASPAR yes 118481820
chr1 233811398 233811406 LHX9 JASPAR yes 118481821
chr1 233811398 233811406 LMX1B JASPAR yes 118481822
chr1 233811398 233811406 PRRX1 JASPAR yes 118481823
chr1 233811398 233811406 RAX2 JASPAR yes 118481824
chr1 233811398 233811406 SHOX JASPAR yes 118481825
chr1 233811398 233811406 UNCX JASPAR yes 118481826
chr1 233811399 233811409 PAX7 JASPAR yes 36233326
chr1 233811399 233811409 PAX7 JASPAR yes 118481827
chr1 233811399 233811410 PHOX2A JASPAR yes 36233327
chr1 233811399 233811410 PHOX2A JASPAR yes 118481828
chr1 233811401 233811406 MYB TRANSFAC yes 36233328
chr1 233811401 233811406 MYB TRANSFAC yes 118481829
chr1 233811415 233811425 NFATC3 JASPAR yes 36233329
chr1 233811415 233811425 NFATC3 JASPAR yes 118481830
chr1 233811417 233811424 NFATC2 JASPAR yes 36233330
chr1 233811417 233811424 NFATC2 JASPAR yes 118481831
chr1 233811417 233811428 NFKB1 JASPAR yes 36233331
chr1 233811417 233811428 NFKB1 JASPAR yes 118481832
chr1 233811417 233811437 TP53 JASPAR yes 36233332
chr1 233811417 233811437 TP53 JASPAR yes 118481833
chr1 233811418 233811428 NFKB1 JASPAR yes 36233333
chr1 233811418 233811428 RELA JASPAR yes 36233334
chr1 233811418 233811428 REL JASPAR yes 36233335
chr1 233811418 233811428 NFKB1 JASPAR yes 118481834
chr1 233811418 233811428 RELA JASPAR yes 118481835
chr1 233811418 233811428 REL JASPAR yes 118481836
chr1 233811418 233811429 NFKB1 JASPAR yes 36233336
chr1 233811418 233811429 NFKB1 JASPAR yes 118481837
chr1 233811421 233811441 TP53 JASPAR yes 36233337
chr1 233811421 233811441 TP53 JASPAR yes 118481838
chr1 233811426 233811446 RREB1 JASPAR yes 36233338
chr1 233811426 233811446 RREB1 JASPAR yes 118481839
chr1 233811435 233811447 ZBTB7B JASPAR yes 36233339
chr1 233811435 233811447 ZBTB7C JASPAR yes 36233340
chr1 233811435 233811447 ZBTB7B JASPAR yes 118481840
chr1 233811435 233811447 ZBTB7C JASPAR yes 118481841
chr1 233811436 233811446 RUNX3 JASPAR yes 36233341
chr1 233811436 233811446 RUNX3 JASPAR yes 118481842
SNP sites on vista5579[chr1:233811305-233811449]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 233811374 rs568447277 G C
NFY NFYB PBX1 SOX4
1037258
Genes possibly regulated by vista5579[chr1:233811305-233811449]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 233749750 233808258 + KCNK1 ENSG00000135750.10 233749750 0.7 1.0 1960 38445
Expression level of Genes
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miRNAs possibly regulated by vista5579[chr1:233811305-233811449]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results