EnhancerDB
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  3. vista5595[chr1:234559176-234559516]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5595[chr1:234559176-234559516]
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Tissue distribution of vista5595
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Transcription factor that possibly regulate vista5595[chr1:234559176-234559516]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 234559202 234559206 LFA1 TRANSFAC yes 118482451
chr1 234559231 234559235 NFE TRANSFAC yes 118482452
chr1 234559253 234559257 YY1 TRANSFAC yes 118482453
chr1 234559261 234559279 NR3C1 JASPAR yes 118482454
chr1 234559304 234559310 SOX10 JASPAR yes 118482455
chr1 234559322 234559332 TFAP4 JASPAR yes 118482456
chr1 234559409 234559419 ID4 JASPAR yes 118482457
chr1 234559409 234559419 TCF4 JASPAR yes 118482458
chr1 234559449 234559460 USF2 JASPAR yes 118482459
chr1 234559450 234559457 USF2 TRANSFAC yes 118482460
chr1 234559450 234559460 SREBF1 JASPAR yes 118482461
chr1 234559450 234559460 SREBF2 JASPAR yes 118482462
chr1 234559450 234559460 TFEC JASPAR yes 118482463
chr1 234559452 234559457 USF2 TRANSFAC yes 118482464
chr1 234559461 234559476 ESR2 JASPAR yes 118482465
chr1 234559464 234559485 ZNF263 JASPAR yes 118482466
chr1 234559466 234559479 NR2F1 JASPAR yes 118482467
chr1 234559473 234559488 PRDM1 JASPAR yes 118482468
chr1 234559488 234559509 IRF1 JASPAR yes 118482469
chr1 234559489 234559510 IRF1 JASPAR yes 118482470
chr1 234559492 234559513 IRF1 JASPAR yes 118482471
chr1 234559493 234559508 FOXP1 JASPAR yes 118482472
chr1 234559493 234559514 IRF1 JASPAR yes 118482473
chr1 234559494 234559509 FOXP1 JASPAR yes 118482474
chr1 234559494 234559515 IRF1 JASPAR yes 118482475
chr1 234559495 234559510 FOXP1 JASPAR yes 118482476
chr1 234559496 234559511 FOXP1 JASPAR yes 118482477
chr1 234559497 234559512 FOXP1 JASPAR yes 118482478
chr1 234559498 234559513 FOXP1 JASPAR yes 118482479
chr1 234559499 234559514 FOXP1 JASPAR yes 118482480
chr1 234559500 234559515 FOXP1 JASPAR yes 118482481
chr1 234559501 234559516 FOXP1 JASPAR yes 118482482
SNP sites on vista5595[chr1:234559176-234559516]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 234559182 rs200226519 CCT C no 1041931
chr1 234559217 rs74147467 G C no 1041932
chr1 234559283 rs556485074 T A no 1041933
chr1 234559397 rs6676815 A G no 1041934
chr1 234559416 rs139930738 T C
ID4 TCF4
1041935
chr1 234559420 rs76602957 C T no 1041936
chr1 234559487 rs74147468 T C
PRDM1
1041937
Genes possibly regulated by vista5595[chr1:234559176-234559516]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 234509202 234519795 + COA6 ENSG00000168275.10 234509202 0.88 0.98 1962 50026
chr1 234527059 234614849 - TARBP1 ENSG00000059588.5 234614849 0.78 0.99 1963 44667
Expression level of Genes
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miRNAs possibly regulated by vista5595[chr1:234559176-234559516]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results