EnhancerDB
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  3. vista5598[chr1:234630748-234630905]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5598[chr1:234630748-234630905]
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Tissue distribution of vista5598
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Transcription factor that possibly regulate vista5598[chr1:234630748-234630905]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 234630734 234630749 RUNX2 JASPAR yes 36278637
chr1 234630734 234630749 RUNX2 JASPAR yes 118482556
chr1 234630746 234630761 TP53 JASPAR yes 36278638
chr1 234630746 234630761 TP53 JASPAR yes 118482557
chr1 234630783 234630788 MYC TRANSFAC yes 36278639
chr1 234630783 234630788 MYC TRANSFAC yes 118482558
chr1 234630788 234630807 RFX2 JASPAR yes 36278640
chr1 234630788 234630807 RFX2 JASPAR yes 118482559
chr1 234630790 234630805 RFX5 JASPAR yes 36278641
chr1 234630790 234630805 RFX5 JASPAR yes 118482560
chr1 234630798 234630808 NFATC3 JASPAR yes 36278642
chr1 234630798 234630808 NFATC3 JASPAR yes 118482561
chr1 234630803 234630821 NR3C1 JASPAR yes 36278643
chr1 234630803 234630821 NR3C1 JASPAR yes 118482562
chr1 234630834 234630852 NFYA JASPAR yes 36278644
chr1 234630834 234630852 NFYA JASPAR yes 118482563
chr1 234630835 234630839 YY1 TRANSFAC yes 36278645
chr1 234630835 234630839 YY1 TRANSFAC yes 118482564
chr1 234630837 234630853 NFYA JASPAR yes 36278646
chr1 234630837 234630853 NFYA JASPAR yes 118482565
chr1 234630840 234630855 NFYB JASPAR yes 36278647
chr1 234630840 234630855 NFYB JASPAR yes 118482566
chr1 234630842 234630847 NFY TRANSFAC yes 36278648
chr1 234630842 234630847 NFY TRANSFAC yes 118482567
chr1 234630846 234630863 RXRA JASPAR yes 36278649
chr1 234630846 234630863 RXRA JASPAR yes 118482568
chr1 234630847 234630858 ESRRA JASPAR yes 36278650
chr1 234630847 234630858 ESRRB JASPAR yes 36278651
chr1 234630847 234630858 ESRRA JASPAR yes 118482569
chr1 234630847 234630858 ESRRB JASPAR yes 118482570
chr1 234630848 234630862 RORA JASPAR yes 36278652
chr1 234630848 234630862 RORA JASPAR yes 118482571
chr1 234630849 234630859 RORA JASPAR yes 36278653
chr1 234630849 234630859 RORA JASPAR yes 118482572
chr1 234630856 234630861 H4TF1 TRANSFAC yes 36278654
chr1 234630856 234630861 H4TF1 TRANSFAC yes 118482573
chr1 234630863 234630875 TAL1 JASPAR yes 36278655
chr1 234630863 234630875 TAL1 JASPAR yes 118482574
chr1 234630870 234630885 HNF4A JASPAR yes 36278656
chr1 234630870 234630885 HNF4A JASPAR yes 118482575
chr1 234630879 234630891 GLI2 JASPAR yes 36278657
chr1 234630879 234630891 GLI2 JASPAR yes 118482576
chr1 234630879 234630896 NR3C1 JASPAR yes 36278658
chr1 234630879 234630896 NR3C2 JASPAR yes 36278659
chr1 234630879 234630896 NR3C1 JASPAR yes 118482577
chr1 234630879 234630896 NR3C2 JASPAR yes 118482578
chr1 234630881 234630896 AR JASPAR yes 36278660
chr1 234630881 234630896 AR JASPAR yes 118482579
chr1 234630891 234630910 CTCF JASPAR yes 36278661
chr1 234630891 234630910 CTCF JASPAR yes 118482580
SNP sites on vista5598[chr1:234630748-234630905]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 234630788 rs57625052 G A
MYC RFX2
1042379
chr1 234630800 rs73115748 A G
NFATC3 RFX2 RFX5
1042380
chr1 234630842 rs151290561 C T
NFY NFYA NFYB
1042381
Genes possibly regulated by vista5598[chr1:234630748-234630905]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 234527059 234614849 - TARBP1 ENSG00000059588.5 234614849 0.78 0.99 1963 84101
Expression level of Genes
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miRNAs possibly regulated by vista5598[chr1:234630748-234630905]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results