EnhancerDB
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  3. vista56[chr1:2059932-2059994]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista56[chr1:2059932-2059994]
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Tissue distribution of vista56
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Transcription factor that possibly regulate vista56[chr1:2059932-2059994]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 2059920 2059939 RFX2 JASPAR yes 26217908
chr1 2059920 2059939 RFX2 JASPAR yes 118215775
chr1 2059924 2059940 RFX2 JASPAR yes 26217909
chr1 2059924 2059940 RFX3 JASPAR yes 26217910
chr1 2059924 2059940 RFX4 JASPAR yes 26217911
chr1 2059924 2059940 RFX5 JASPAR yes 26217912
chr1 2059924 2059940 RFX2 JASPAR yes 118215776
chr1 2059924 2059940 RFX3 JASPAR yes 118215777
chr1 2059924 2059940 RFX4 JASPAR yes 118215778
chr1 2059924 2059940 RFX5 JASPAR yes 118215779
chr1 2059925 2059944 RFX2 JASPAR yes 26217913
chr1 2059925 2059944 RFX2 JASPAR yes 118215780
chr1 2059930 2059940 NFATC3 JASPAR yes 26217914
chr1 2059930 2059940 NFATC3 JASPAR yes 118215781
chr1 2059964 2059979 MEF2A JASPAR yes 26217915
chr1 2059964 2059979 MEF2A JASPAR yes 118215782
chr1 2059965 2059975 POU6F2 JASPAR yes 26217916
chr1 2059965 2059975 POU6F2 JASPAR yes 118215783
chr1 2059965 2059980 MEF2A JASPAR yes 26217917
chr1 2059965 2059980 MEF2A JASPAR yes 118215784
chr1 2059966 2059976 ALX3 JASPAR yes 26217918
chr1 2059966 2059976 GSX1 JASPAR yes 26217919
chr1 2059966 2059976 MEOX1 JASPAR yes 26217920
chr1 2059966 2059976 ALX3 JASPAR yes 118215785
chr1 2059966 2059976 GSX1 JASPAR yes 118215786
chr1 2059966 2059976 MEOX1 JASPAR yes 118215787
chr1 2059966 2059978 MEF2A JASPAR yes 26217921
chr1 2059966 2059978 MEF2B JASPAR yes 26217922
chr1 2059966 2059978 MEF2D JASPAR yes 26217923
chr1 2059966 2059978 MEF2A JASPAR yes 118215788
chr1 2059966 2059978 MEF2B JASPAR yes 118215789
chr1 2059966 2059978 MEF2D JASPAR yes 118215790
chr1 2059967 2059975 LBX1 JASPAR yes 26217924
chr1 2059967 2059975 PDX1 JASPAR yes 26217925
chr1 2059967 2059975 VAX1 JASPAR yes 26217926
chr1 2059967 2059975 VAX2 JASPAR yes 26217927
chr1 2059967 2059975 VSX1 JASPAR yes 26217928
chr1 2059967 2059975 VSX2 JASPAR yes 26217929
chr1 2059967 2059975 LBX1 JASPAR yes 118215791
chr1 2059967 2059975 PDX1 JASPAR yes 118215792
chr1 2059967 2059975 VAX1 JASPAR yes 118215793
chr1 2059967 2059975 VAX2 JASPAR yes 118215794
chr1 2059967 2059975 VSX1 JASPAR yes 118215795
chr1 2059967 2059975 VSX2 JASPAR yes 118215796
chr1 2059967 2059977 MEF2A JASPAR yes 26217930
chr1 2059967 2059977 MEF2A JASPAR yes 118215797
SNP sites on vista56[chr1:2059932-2059994]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 2059959 rs58172958 G A no 11030
Genes possibly regulated by vista56[chr1:2059932-2059994]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 1981909 2116834 + PRKCZ ENSG00000067606.11 1981909 0.87 1.0 57 21977
chr1 2115903 2144159 - C1orf86 ENSG00000162585.12 2144159 0.73 1.0 58 15835
chr1 2121237 2123179 + AL590822.2 ENSG00000269554.1 2121237 0.65 1.0 59 38757
chr1 2143360 2145620 - AL590822.1 ENSG00000203301.2 2145620 0.82 0.87 60 14374
Expression level of Genes
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miRNAs possibly regulated by vista56[chr1:2059932-2059994]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results