EnhancerDB
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  3. vista5600[chr1:234635806-234635989]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5600[chr1:234635806-234635989]
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Tissue distribution of vista5600
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Transcription factor that possibly regulate vista5600[chr1:234635806-234635989]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 234635818 234635839 IRF1 JASPAR yes 36279501
chr1 234635818 234635839 IRF1 JASPAR yes 118482659
chr1 234635824 234635845 IRF1 JASPAR yes 36279502
chr1 234635824 234635845 IRF1 JASPAR yes 118482660
chr1 234635826 234635841 STAT2 JASPAR yes 36279503
chr1 234635826 234635841 STAT2 JASPAR yes 118482661
chr1 234635827 234635831 YY1 TRANSFAC yes 36279504
chr1 234635827 234635831 YY1 TRANSFAC yes 118482662
chr1 234635828 234635840 IRF1 JASPAR yes 36279505
chr1 234635828 234635840 IRF1 JASPAR yes 118482663
chr1 234635844 234635860 POU4F3 JASPAR yes 36279506
chr1 234635844 234635860 POU4F3 JASPAR yes 118482664
chr1 234635846 234635860 POU4F1 JASPAR yes 36279507
chr1 234635846 234635860 POU4F1 JASPAR yes 118482665
chr1 234635846 234635861 HNF1A JASPAR yes 36279508
chr1 234635846 234635861 HNF1A JASPAR yes 118482666
chr1 234635847 234635860 HNF1B JASPAR yes 36279509
chr1 234635847 234635860 HNF1B JASPAR yes 118482667
chr1 234635847 234635861 POU4F1 JASPAR yes 36279510
chr1 234635847 234635861 POU4F1 JASPAR yes 118482668
chr1 234635847 234635863 POU4F2 JASPAR yes 36279511
chr1 234635847 234635863 POU4F3 JASPAR yes 36279512
chr1 234635847 234635863 POU4F2 JASPAR yes 118482669
chr1 234635847 234635863 POU4F3 JASPAR yes 118482670
chr1 234635850 234635860 LHX6 JASPAR yes 36279513
chr1 234635850 234635860 MNX1 JASPAR yes 36279514
chr1 234635850 234635860 POU6F1 JASPAR yes 36279515
chr1 234635850 234635860 LHX6 JASPAR yes 118482671
chr1 234635850 234635860 MNX1 JASPAR yes 118482672
chr1 234635850 234635860 POU6F1 JASPAR yes 118482673
chr1 234635851 234635859 LMX1A JASPAR yes 36279516
chr1 234635851 234635859 LMX1B JASPAR yes 36279517
chr1 234635851 234635859 NKX6-1 JASPAR yes 36279518
chr1 234635851 234635859 NKX6-2 JASPAR yes 36279519
chr1 234635851 234635859 VAX1 JASPAR yes 36279520
chr1 234635851 234635859 VAX2 JASPAR yes 36279521
chr1 234635851 234635859 VSX1 JASPAR yes 36279522
chr1 234635851 234635859 VSX2 JASPAR yes 36279523
chr1 234635851 234635859 LMX1A JASPAR yes 118482674
chr1 234635851 234635859 LMX1B JASPAR yes 118482675
chr1 234635851 234635859 NKX6-1 JASPAR yes 118482676
chr1 234635851 234635859 NKX6-2 JASPAR yes 118482677
chr1 234635851 234635859 VAX1 JASPAR yes 118482678
chr1 234635851 234635859 VAX2 JASPAR yes 118482679
chr1 234635851 234635859 VSX1 JASPAR yes 118482680
chr1 234635851 234635859 VSX2 JASPAR yes 118482681
chr1 234635852 234635862 PAX3 JASPAR yes 36279524
chr1 234635852 234635862 PAX7 JASPAR yes 36279525
chr1 234635852 234635862 PAX3 JASPAR yes 118482682
chr1 234635852 234635862 PAX7 JASPAR yes 118482683
chr1 234635884 234635888 YY1 TRANSFAC yes 36279526
chr1 234635884 234635888 YY1 TRANSFAC yes 118482684
chr1 234635904 234635909 H4TF1 TRANSFAC yes 36279527
chr1 234635904 234635909 H4TF1 TRANSFAC yes 118482685
chr1 234635906 234635912 ETS1 JASPAR yes 36279528
chr1 234635906 234635912 ETS1 JASPAR yes 118482686
chr1 234635921 234635942 IRF1 JASPAR yes 36279529
chr1 234635921 234635942 IRF1 JASPAR yes 118482687
chr1 234635923 234635938 STAT2 JASPAR yes 36279530
chr1 234635923 234635938 STAT2 JASPAR yes 118482688
chr1 234635924 234635938 STAT1 JASPAR yes 36279531
chr1 234635924 234635938 STAT1 JASPAR yes 118482689
chr1 234635925 234635939 IRF7 JASPAR yes 36279532
chr1 234635925 234635939 IRF8 JASPAR yes 36279533
chr1 234635925 234635939 IRF7 JASPAR yes 118482690
chr1 234635925 234635939 IRF8 JASPAR yes 118482691
chr1 234635925 234635940 IRF9 JASPAR yes 36279534
chr1 234635925 234635940 IRF9 JASPAR yes 118482692
chr1 234635928 234635940 FOXI1 JASPAR yes 36279535
chr1 234635928 234635940 FOXI1 JASPAR yes 118482693
chr1 234635928 234635943 FOXP1 JASPAR yes 36279536
chr1 234635928 234635943 FOXP1 JASPAR yes 118482694
chr1 234635929 234635940 FOXP2 JASPAR yes 36279537
chr1 234635929 234635940 FOXP2 JASPAR yes 118482695
chr1 234635931 234635952 ZNF263 JASPAR yes 36279538
chr1 234635931 234635952 ZNF263 JASPAR yes 118482696
chr1 234635935 234635939 YY1 TRANSFAC yes 36279539
chr1 234635935 234635939 YY1 TRANSFAC yes 118482697
chr1 234635935 234635956 ZNF263 JASPAR yes 36279540
chr1 234635935 234635956 ZNF263 JASPAR yes 118482698
chr1 234635936 234635944 FEV JASPAR yes 36279541
chr1 234635936 234635944 FEV JASPAR yes 118482699
chr1 234635938 234635943 ETS2 TRANSFAC yes 36279542
chr1 234635938 234635943 ETS2 TRANSFAC yes 118482700
chr1 234635938 234635959 ZNF263 JASPAR yes 36279543
chr1 234635938 234635959 ZNF263 JASPAR yes 118482701
chr1 234635940 234635948 EHF JASPAR yes 36279544
chr1 234635940 234635948 EHF JASPAR yes 118482702
chr1 234635942 234635947 ETS2 TRANSFAC yes 36279545
chr1 234635942 234635947 ETS2 TRANSFAC yes 118482703
chr1 234635943 234635964 IRF1 JASPAR yes 36279546
chr1 234635943 234635964 IRF1 JASPAR yes 118482704
chr1 234635945 234635960 PRDM1 JASPAR yes 36279547
chr1 234635945 234635960 PRDM1 JASPAR yes 118482705
chr1 234635946 234635960 SPIC JASPAR yes 36279548
chr1 234635946 234635960 STAT1 JASPAR yes 36279549
chr1 234635946 234635960 SPIC JASPAR yes 118482706
chr1 234635946 234635960 STAT1 JASPAR yes 118482707
chr1 234635970 234635980 ETV6 JASPAR yes 36279550
chr1 234635970 234635980 ETV6 JASPAR yes 118482708
chr1 234635982 234635995 ATF4 JASPAR yes 36279551
chr1 234635982 234635995 ATF4 JASPAR yes 118482709
SNP sites on vista5600[chr1:234635806-234635989]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 234635899 rs6586392 A G no 1042474
chr1 234635937 rs533690730 A T
FEV FOXI1 FOXP1 FOXP2 IRF1 IRF7 IRF8 IRF9 STAT1 STAT2 YY1 ZNF263
1042475
chr1 234635971 rs60963149 C T
ETV6
1042476
Genes possibly regulated by vista5600[chr1:234635806-234635989]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 234527059 234614849 - TARBP1 ENSG00000059588.5 234614849 0.78 0.99 1963 79043
Expression level of Genes
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miRNAs possibly regulated by vista5600[chr1:234635806-234635989]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results