EnhancerDB
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  3. vista5605[chr1:234668185-234668630]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5605[chr1:234668185-234668630]
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Tissue distribution of vista5605
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Transcription factor that possibly regulate vista5605[chr1:234668185-234668630]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 234668176 234668197 IRF1 JASPAR yes 36284681
chr1 234668176 234668197 IRF1 JASPAR yes 118483029
chr1 234668180 234668195 PRDM1 JASPAR yes 36284682
chr1 234668180 234668195 PRDM1 JASPAR yes 118483030
chr1 234668180 234668201 IRF1 JASPAR yes 36284683
chr1 234668180 234668201 IRF1 JASPAR yes 118483031
chr1 234668182 234668203 IRF1 JASPAR yes 36284684
chr1 234668182 234668203 IRF1 JASPAR yes 118483032
chr1 234668184 234668199 PRDM1 JASPAR yes 36284685
chr1 234668184 234668199 PRDM1 JASPAR yes 118483033
chr1 234668184 234668205 ZNF263 JASPAR yes 36284686
chr1 234668184 234668205 ZNF263 JASPAR yes 118483034
chr1 234668206 234668220 RORA JASPAR yes 36284687
chr1 234668206 234668220 RORA JASPAR yes 118483035
chr1 234668230 234668242 TGIF1 JASPAR yes 36284688
chr1 234668230 234668242 TGIF1 JASPAR yes 118483036
chr1 234668233 234668246 NR2F1 JASPAR yes 36284689
chr1 234668233 234668246 NR2F1 JASPAR yes 118483037
chr1 234668236 234668251 ESR2 JASPAR yes 36284690
chr1 234668236 234668251 ESR2 JASPAR yes 118483038
chr1 234668237 234668241 ESR1 TRANSFAC yes 36284691
chr1 234668237 234668241 ESR1 TRANSFAC yes 118483039
chr1 234668256 234668270 ONECUT2 JASPAR yes 36284692
chr1 234668256 234668270 ONECUT2 JASPAR yes 118483040
chr1 234668257 234668268 FOXH1 JASPAR yes 36284693
chr1 234668257 234668268 FOXH1 JASPAR yes 118483041
chr1 234668271 234668281 NFIA JASPAR yes 36284694
chr1 234668271 234668281 NFIA JASPAR yes 118483042
chr1 234668273 234668279 NFIC JASPAR yes 36284695
chr1 234668273 234668279 NFIC JASPAR yes 118483043
chr1 234668276 234668294 MAFF JASPAR yes 36284696
chr1 234668276 234668294 MAFF JASPAR yes 118483044
chr1 234668277 234668292 MAFK JASPAR yes 36284697
chr1 234668277 234668292 MAFK JASPAR yes 118483045
chr1 234668280 234668292 PKNOX1 JASPAR yes 36284698
chr1 234668280 234668292 PKNOX2 JASPAR yes 36284699
chr1 234668280 234668292 TGIF1 JASPAR yes 36284700
chr1 234668280 234668292 TGIF2 JASPAR yes 36284701
chr1 234668280 234668292 PKNOX1 JASPAR yes 118483046
chr1 234668280 234668292 PKNOX2 JASPAR yes 118483047
chr1 234668280 234668292 TGIF1 JASPAR yes 118483048
chr1 234668280 234668292 TGIF2 JASPAR yes 118483049
chr1 234668281 234668291 TFAP4 JASPAR yes 36284702
chr1 234668281 234668291 TFAP4 JASPAR yes 118483050
chr1 234668296 234668312 ZNF143 JASPAR yes 36284703
chr1 234668296 234668312 ZNF143 JASPAR yes 118483051
chr1 234668317 234668321 LFA1 TRANSFAC yes 36284704
chr1 234668317 234668321 LFA1 TRANSFAC yes 118483052
chr1 234668326 234668330 NFE TRANSFAC yes 36284705
chr1 234668326 234668330 NFE TRANSFAC yes 118483053
chr1 234668326 234668331 GATA1 TRANSFAC yes 36284706
chr1 234668326 234668331 GATA1 TRANSFAC yes 118483054
chr1 234668326 234668332 GATA3 JASPAR yes 36284707
chr1 234668326 234668332 GATA3 JASPAR yes 118483055
chr1 234668362 234668365 MYB TRANSFAC yes 36284708
chr1 234668362 234668365 MYB TRANSFAC yes 118483056
chr1 234668366 234668375 NKX3-2 JASPAR yes 36284709
chr1 234668366 234668375 NKX3-2 JASPAR yes 118483057
chr1 234668372 234668376 ESR1 TRANSFAC yes 36284710
chr1 234668372 234668376 ESR1 TRANSFAC yes 118483058
chr1 234668377 234668382 H4TF1 TRANSFAC yes 36284711
chr1 234668377 234668382 H4TF1 TRANSFAC yes 118483059
chr1 234668384 234668392 BARX1 JASPAR yes 36284712
chr1 234668384 234668392 BARX1 JASPAR yes 118483060
chr1 234668399 234668417 RARA JASPAR yes 36284713
chr1 234668399 234668417 RARA JASPAR yes 118483061
chr1 234668434 234668448 MTF1 JASPAR yes 36284714
chr1 234668434 234668448 MTF1 JASPAR yes 118483062
chr1 234668438 234668449 FOXA1 JASPAR yes 36284715
chr1 234668438 234668449 FOXA1 JASPAR yes 118483063
chr1 234668442 234668448 TCF4 TRANSFAC yes 36284716
chr1 234668442 234668448 TCF4 TRANSFAC yes 118483064
chr1 234668446 234668462 SOX4 JASPAR yes 36284717
chr1 234668446 234668462 SOX4 JASPAR yes 118483065
chr1 234668449 234668454 MYC TRANSFAC yes 36284718
chr1 234668449 234668454 MYC TRANSFAC yes 118483066
chr1 234668450 234668461 CEBPB JASPAR yes 36284719
chr1 234668450 234668461 CEBPB JASPAR yes 118483067
chr1 234668450 234668462 DBP JASPAR yes 36284720
chr1 234668450 234668462 HLF JASPAR yes 36284721
chr1 234668450 234668462 DBP JASPAR yes 118483068
chr1 234668450 234668462 HLF JASPAR yes 118483069
chr1 234668451 234668461 CEBPB JASPAR yes 36284722
chr1 234668451 234668461 CEBPD JASPAR yes 36284723
chr1 234668451 234668461 CEBPE JASPAR yes 36284724
chr1 234668451 234668461 CEBPG JASPAR yes 36284725
chr1 234668451 234668461 CEBPB JASPAR yes 118483070
chr1 234668451 234668461 CEBPD JASPAR yes 118483071
chr1 234668451 234668461 CEBPE JASPAR yes 118483072
chr1 234668451 234668461 CEBPG JASPAR yes 118483073
chr1 234668451 234668462 CEBPA JASPAR yes 36284726
chr1 234668451 234668462 CEBPA JASPAR yes 118483074
chr1 234668455 234668465 EVX1 JASPAR yes 36284727
chr1 234668455 234668465 EVX1 JASPAR yes 118483075
chr1 234668456 234668470 POU1F1 JASPAR yes 36284728
chr1 234668456 234668470 POU1F1 JASPAR yes 118483076
chr1 234668457 234668469 POU3F1 JASPAR yes 36284729
chr1 234668457 234668469 POU3F2 JASPAR yes 36284730
chr1 234668457 234668469 POU3F1 JASPAR yes 118483077
chr1 234668457 234668469 POU3F2 JASPAR yes 118483078
chr1 234668464 234668468 YY1 TRANSFAC yes 36284731
chr1 234668464 234668468 YY1 TRANSFAC yes 118483079
chr1 234668495 234668503 EHF JASPAR yes 36284732
chr1 234668495 234668503 EHF JASPAR yes 118483080
chr1 234668515 234668519 YY1 TRANSFAC yes 36284733
chr1 234668515 234668519 YY1 TRANSFAC yes 118483081
chr1 234668527 234668542 AR JASPAR yes 36284734
chr1 234668527 234668542 AR JASPAR yes 118483082
chr1 234668533 234668539 SOX10 JASPAR yes 36284735
chr1 234668533 234668539 SOX10 JASPAR yes 118483083
chr1 234668563 234668573 NFIA JASPAR yes 36284736
chr1 234668563 234668573 NFIA JASPAR yes 118483084
chr1 234668565 234668571 NFIC JASPAR yes 36284737
chr1 234668565 234668571 NFIC JASPAR yes 118483085
chr1 234668569 234668589 TP53 JASPAR yes 36284738
chr1 234668569 234668589 TP53 JASPAR yes 118483086
chr1 234668574 234668592 RARA JASPAR yes 36284739
chr1 234668574 234668592 RARA JASPAR yes 118483087
chr1 234668580 234668584 YY1 TRANSFAC yes 36284740
chr1 234668580 234668584 YY1 TRANSFAC yes 118483088
chr1 234668617 234668623 YY1 JASPAR yes 36284741
chr1 234668617 234668623 YY1 JASPAR yes 118483089
chr1 234668618 234668632 TLX1 JASPAR yes 36284742
chr1 234668618 234668632 TLX1 JASPAR yes 118483090
chr1 234668619 234668633 TLX1 JASPAR yes 36284743
chr1 234668619 234668633 TLX1 JASPAR yes 118483091
chr1 234668622 234668631 SNAI2 JASPAR yes 36284744
chr1 234668622 234668631 SNAI2 JASPAR yes 118483092
chr1 234668623 234668628 USF2 TRANSFAC yes 36284745
chr1 234668623 234668628 USF2 TRANSFAC yes 118483093
chr1 234668630 234668636 HiNF-A TRANSFAC yes 36284746
chr1 234668630 234668636 HiNF-A TRANSFAC yes 118483094
SNP sites on vista5605[chr1:234668185-234668630]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 234668203 rs2487589 G A
IRF1 ZNF263
1042961
chr1 234668280 rs6673823 G T
MAFF MAFK NFIA PKNOX1 PKNOX2 TGIF1 TGIF2
1042962
chr1 234668317 rs148015285 C T
LFA1
1042963
chr1 234668366 rs547378700 C T
NKX3-2
1042964
chr1 234668367 rs567189976 G A
NKX3-2
1042965
chr1 234668489 rs114941908 G A no 1042966
Genes possibly regulated by vista5605[chr1:234668185-234668630]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 234527059 234614849 - TARBP1 ENSG00000059588.5 234614849 0.78 0.99 1963 46664
chr1 234740015 234745271 - IRF2BP2 ENSG00000168264.6 234745271 0.68 1.0 1964 23359
Expression level of Genes
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miRNAs possibly regulated by vista5605[chr1:234668185-234668630]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results