EnhancerDB
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  3. vista5607[chr1:234669721-234669929]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5607[chr1:234669721-234669929]
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Tissue distribution of vista5607
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Transcription factor that possibly regulate vista5607[chr1:234669721-234669929]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 234669671 234670075 STAT3 UCSC Txn Factor no Conserved 107880379
chr1 234669729 234669985 CEBPB UCSC Txn Factor no Conserved 107880381
chr1 234669733 234669752 REST JASPAR yes 36284881
chr1 234669733 234669752 REST JASPAR yes 118483129
chr1 234669747 234669753 GATA3 JASPAR yes 36284882
chr1 234669747 234669753 GATA3 JASPAR yes 118483130
chr1 234669773 234669787 POU4F1 JASPAR yes 36284883
chr1 234669773 234669787 POU4F1 JASPAR yes 118483131
chr1 234669773 234669789 POU4F2 JASPAR yes 36284884
chr1 234669773 234669789 POU4F3 JASPAR yes 36284885
chr1 234669773 234669789 POU4F2 JASPAR yes 118483132
chr1 234669773 234669789 POU4F3 JASPAR yes 118483133
chr1 234669778 234669788 PAX3 JASPAR yes 36284886
chr1 234669778 234669788 PAX7 JASPAR yes 36284887
chr1 234669778 234669788 PAX3 JASPAR yes 118483134
chr1 234669778 234669788 PAX7 JASPAR yes 118483135
chr1 234669786 234669792 NFIC JASPAR yes 36284888
chr1 234669786 234669792 NFIC JASPAR yes 118483136
chr1 234669789 234669808 REST JASPAR yes 36284889
chr1 234669789 234669808 REST JASPAR yes 118483137
chr1 234669803 234669818 HSF1 JASPAR yes 36284890
chr1 234669803 234669818 HSF1 JASPAR yes 118483138
chr1 234669804 234669817 HSF1 JASPAR yes 36284891
chr1 234669804 234669817 HSF2 JASPAR yes 36284892
chr1 234669804 234669817 HSF4 JASPAR yes 36284893
chr1 234669804 234669817 HSF1 JASPAR yes 118483139
chr1 234669804 234669817 HSF2 JASPAR yes 118483140
chr1 234669804 234669817 HSF4 JASPAR yes 118483141
chr1 234669807 234669818 STAT3 JASPAR yes 36284894
chr1 234669807 234669818 STAT3 JASPAR yes 118483142
chr1 234669808 234669823 HSF1 JASPAR yes 36284895
chr1 234669808 234669823 HSF1 JASPAR yes 118483143
chr1 234669809 234669822 HSF2 JASPAR yes 36284896
chr1 234669809 234669822 HSF2 JASPAR yes 118483144
chr1 234669842 234669846 H1TF2 TRANSFAC yes 36284897
chr1 234669842 234669846 NFE TRANSFAC yes 36284898
chr1 234669842 234669846 SRF TRANSFAC yes 36284899
chr1 234669842 234669846 H1TF2 TRANSFAC yes 118483145
chr1 234669842 234669846 NFE TRANSFAC yes 118483146
chr1 234669842 234669846 SRF TRANSFAC yes 118483147
chr1 234669850 234669854 YY1 TRANSFAC yes 36284900
chr1 234669850 234669854 YY1 TRANSFAC yes 118483148
chr1 234669865 234669879 TLX1 JASPAR yes 36284901
chr1 234669865 234669879 TLX1 JASPAR yes 118483149
chr1 234669898 234669903 GATA1 TRANSFAC yes 36284902
chr1 234669898 234669903 GATA1 TRANSFAC yes 118483150
SNP sites on vista5607[chr1:234669721-234669929]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 234669800 rs550117359 G A
CEBPB REST STAT3
1042983
chr1 234669847 rs271762 T C
CEBPB STAT3
1042984
chr1 234669889 rs148747323 A C
CEBPB STAT3
1042985
Genes possibly regulated by vista5607[chr1:234669721-234669929]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 234527059 234614849 - TARBP1 ENSG00000059588.5 234614849 0.78 0.99 1963 45128
chr1 234740015 234745271 - IRF2BP2 ENSG00000168264.6 234745271 0.68 1.0 1964 24658
Expression level of Genes
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miRNAs possibly regulated by vista5607[chr1:234669721-234669929]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results