EnhancerDB
  1. Home
  2. Enhancers
  3. vista5608[chr1:234672704-234672883]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5608[chr1:234672704-234672883]
Back to top
Tissue distribution of vista5608
Back to top
Transcription factor that possibly regulate vista5608[chr1:234672704-234672883]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 234672700 234672711 BATF JASPAR yes 36285319
chr1 234672700 234672711 BATF JASPAR yes 118483151
chr1 234672715 234672719 NFE TRANSFAC yes 36285320
chr1 234672715 234672719 NFE TRANSFAC yes 118483152
chr1 234672715 234672728 SMAD2 JASPAR yes 36285321
chr1 234672715 234672728 SMAD2 JASPAR yes 118483153
chr1 234672728 234672743 HNF1A JASPAR yes 36285322
chr1 234672728 234672743 HNF1A JASPAR yes 118483154
chr1 234672729 234672742 HNF1B JASPAR yes 36285323
chr1 234672729 234672742 HNF1B JASPAR yes 118483155
chr1 234672753 234672759 TCF4 TRANSFAC yes 36285324
chr1 234672753 234672759 TCF4 TRANSFAC yes 118483156
chr1 234672775 234672789 ZIC1 JASPAR yes 36285325
chr1 234672775 234672789 ZIC1 JASPAR yes 118483157
chr1 234672775 234672790 ZIC3 JASPAR yes 36285326
chr1 234672775 234672790 ZIC4 JASPAR yes 36285327
chr1 234672775 234672790 ZIC3 JASPAR yes 118483158
chr1 234672775 234672790 ZIC4 JASPAR yes 118483159
chr1 234672797 234672811 PLAG1 JASPAR yes 36285328
chr1 234672797 234672811 PLAG1 JASPAR yes 118483160
chr1 234672800 234672813 TFAP2A JASPAR yes 36285329
chr1 234672800 234672813 TFAP2B JASPAR yes 36285330
chr1 234672800 234672813 TFAP2C JASPAR yes 36285331
chr1 234672800 234672813 TFAP2A JASPAR yes 118483161
chr1 234672800 234672813 TFAP2B JASPAR yes 118483162
chr1 234672800 234672813 TFAP2C JASPAR yes 118483163
chr1 234672801 234672812 EBF1 JASPAR yes 36285332
chr1 234672801 234672812 EBF1 JASPAR yes 118483164
chr1 234672807 234672812 SP1 TRANSFAC yes 36285333
chr1 234672807 234672812 SP1 TRANSFAC yes 118483165
chr1 234672807 234672821 PLAG1 JASPAR yes 36285334
chr1 234672807 234672821 PLAG1 JASPAR yes 118483166
chr1 234672841 234672844 MYB TRANSFAC yes 36285335
chr1 234672841 234672844 MYB TRANSFAC yes 118483167
chr1 234672856 234672869 SMAD2 JASPAR yes 36285336
chr1 234672856 234672869 SMAD2 JASPAR yes 118483168
chr1 234672859 234672880 ZNF263 JASPAR yes 36285337
chr1 234672859 234672880 ZNF263 JASPAR yes 118483169
chr1 234672862 234672883 ZNF263 JASPAR yes 36285338
chr1 234672862 234672883 ZNF263 JASPAR yes 118483170
chr1 234672870 234672883 ELF1 JASPAR yes 36285339
chr1 234672870 234672883 ELF1 JASPAR yes 118483171
SNP sites on vista5608[chr1:234672704-234672883]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 234672720 rs183107421 C T
SMAD2
1043035
chr1 234672786 rs77970728 A G
ZIC1 ZIC3 ZIC4
1043036
chr1 234672869 rs77845500 T A
SMAD2 ZNF263
1043037
chr1 234672870 rs77447786 C G
ELF1 ZNF263
1043038
Genes possibly regulated by vista5608[chr1:234672704-234672883]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 234527059 234614849 - TARBP1 ENSG00000059588.5 234614849 0.78 0.99 1963 42145
chr1 234740015 234745271 - IRF2BP2 ENSG00000168264.6 234745271 0.68 1.0 1964 27612
Expression level of Genes
Back to top
miRNAs possibly regulated by vista5608[chr1:234672704-234672883]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results