EnhancerDB
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  3. vista5613[chr1:234709673-234709936]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5613[chr1:234709673-234709936]
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Tissue distribution of vista5613
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Transcription factor that possibly regulate vista5613[chr1:234709673-234709936]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 234709721 234710045 CEBPB UCSC Txn Factor no Conserved 107880464
chr1 234709659 234709674 TFAP2C JASPAR yes 36290534
chr1 234709659 234709674 TFAP2C JASPAR yes 118483355
chr1 234709661 234709676 TFAP2A JASPAR yes 36290535
chr1 234709661 234709676 TFAP2A JASPAR yes 118483356
chr1 234709662 234709673 EBF1 JASPAR yes 36290536
chr1 234709662 234709673 EBF1 JASPAR yes 118483357
chr1 234709682 234709697 AR JASPAR yes 36290538
chr1 234709682 234709697 AR JASPAR yes 118483358
chr1 234709689 234709693 NFE TRANSFAC yes 36290539
chr1 234709689 234709693 NFE TRANSFAC yes 118483359
chr1 234709708 234709719 CDX2 JASPAR yes 36290540
chr1 234709708 234709719 CDX2 JASPAR yes 118483360
chr1 234709709 234709720 HOXA10 JASPAR yes 36290541
chr1 234709709 234709720 HOXA10 JASPAR yes 118483361
chr1 234709710 234709719 CDX1 JASPAR yes 36290542
chr1 234709710 234709719 CDX1 JASPAR yes 118483362
chr1 234709710 234709720 HOXA13 JASPAR yes 36290543
chr1 234709710 234709720 HOXB13 JASPAR yes 36290544
chr1 234709710 234709720 HOXD13 JASPAR yes 36290545
chr1 234709710 234709720 HOXA13 JASPAR yes 118483363
chr1 234709710 234709720 HOXB13 JASPAR yes 118483364
chr1 234709710 234709720 HOXD13 JASPAR yes 118483365
chr1 234709723 234709734 DMRT3 JASPAR yes 36290546
chr1 234709723 234709734 DMRT3 JASPAR yes 118483366
chr1 234709727 234709732 GATA2 JASPAR yes 36290547
chr1 234709727 234709732 GATA2 JASPAR yes 118483367
chr1 234709746 234709765 CTCF JASPAR yes 36290548
chr1 234709746 234709765 CTCF JASPAR yes 118483368
chr1 234709749 234709763 ZIC1 JASPAR yes 36290549
chr1 234709749 234709763 ZIC1 JASPAR yes 118483369
chr1 234709759 234709773 BATF3 JASPAR yes 36290550
chr1 234709759 234709773 BATF3 JASPAR yes 118483370
chr1 234709769 234709775 HiNF-A TRANSFAC yes 36290551
chr1 234709769 234709775 HiNF-A TRANSFAC yes 118483371
chr1 234709779 234709789 NKX2-3 JASPAR yes 36290552
chr1 234709779 234709789 NKX2-3 JASPAR yes 118483372
chr1 234709780 234709789 NKX2-8 JASPAR yes 36290553
chr1 234709780 234709789 NKX2-8 JASPAR yes 118483373
chr1 234709797 234709804 PEA3 TRANSFAC yes 36290554
chr1 234709797 234709804 PEA3 TRANSFAC yes 118483374
chr1 234709813 234709824 NRL JASPAR yes 36290555
chr1 234709813 234709824 NRL JASPAR yes 118483375
chr1 234709813 234709828 MAFK JASPAR yes 36290556
chr1 234709813 234709828 MAFK JASPAR yes 118483376
chr1 234709818 234709832 GATA2 JASPAR yes 36290557
chr1 234709818 234709832 GATA2 JASPAR yes 118483377
chr1 234709820 234709826 GATA1 TRANSFAC yes 36290558
chr1 234709820 234709826 GATA1 TRANSFAC yes 118483378
chr1 234709820 234709828 GATA5 JASPAR yes 36290559
chr1 234709820 234709828 GATA5 JASPAR yes 118483379
chr1 234709860 234709864 NFE TRANSFAC yes 36290560
chr1 234709860 234709864 NFE TRANSFAC yes 118483380
chr1 234709887 234709898 CEBPB JASPAR yes 36290561
chr1 234709887 234709898 CEBPB JASPAR yes 118483381
chr1 234709887 234709899 DBP JASPAR yes 36290562
chr1 234709887 234709899 HLF JASPAR yes 36290563
chr1 234709887 234709899 DBP JASPAR yes 118483382
chr1 234709887 234709899 HLF JASPAR yes 118483383
chr1 234709888 234709899 CEBPA JASPAR yes 36290564
chr1 234709888 234709899 CEBPA JASPAR yes 118483384
chr1 234709889 234709903 POU4F1 JASPAR yes 36290565
chr1 234709889 234709903 POU4F1 JASPAR yes 118483385
chr1 234709889 234709905 POU4F2 JASPAR yes 36290566
chr1 234709889 234709905 POU4F3 JASPAR yes 36290567
chr1 234709889 234709905 POU4F2 JASPAR yes 118483386
chr1 234709889 234709905 POU4F3 JASPAR yes 118483387
chr1 234709905 234709909 YY1 TRANSFAC yes 36290568
chr1 234709905 234709909 YY1 TRANSFAC yes 118483388
chr1 234709905 234709916 CEBPB JASPAR yes 36290569
chr1 234709905 234709916 CEBPB JASPAR yes 118483389
chr1 234709906 234709917 CEBPA JASPAR yes 36290570
chr1 234709906 234709917 CEBPA JASPAR yes 118483390
chr1 234709907 234709918 STAT3 JASPAR yes 36290571
chr1 234709907 234709918 STAT3 JASPAR yes 118483391
chr1 234709916 234709934 RARA JASPAR yes 36290572
chr1 234709916 234709934 RARA JASPAR yes 118483392
chr1 234709928 234709949 ZNF263 JASPAR yes 36290573
chr1 234709928 234709949 ZNF263 JASPAR yes 118483393
chr1 234709929 234709933 YY1 TRANSFAC yes 36290574
chr1 234709929 234709933 YY1 TRANSFAC yes 118483394
chr1 234709930 234709943 EOMES JASPAR yes 36290575
chr1 234709930 234709943 EOMES JASPAR yes 118483395
chr1 234709932 234709942 TBR1 JASPAR yes 36290576
chr1 234709932 234709942 TBR1 JASPAR yes 118483396
SNP sites on vista5613[chr1:234709673-234709936]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 234709707 rs1329124 C T no 1043553
chr1 234709749 rs6693886 G A,C
CEBPB CTCF ZIC1
1043554
chr1 234709767 rs6662730 T A,C
BATF3 CEBPB
1043555
chr1 234709921 rs111936380 C A
CEBPB RARA
1043556
Genes possibly regulated by vista5613[chr1:234709673-234709936]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 234527059 234614849 - TARBP1 ENSG00000059588.5 234614849 0.78 0.99 1963 5176
chr1 234740015 234745271 - IRF2BP2 ENSG00000168264.6 234745271 0.68 1.0 1964 64665
Expression level of Genes
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miRNAs possibly regulated by vista5613[chr1:234709673-234709936]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results