EnhancerDB
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  3. vista5620[chr1:234748100-234748931]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5620[chr1:234748100-234748931]
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Tissue distribution of vista5620
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Transcription factor that possibly regulate vista5620[chr1:234748100-234748931]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 234741562 234749622 POLR2A UCSC Txn Factor no Conserved 107880713
chr1 234741562 234749622 POLR2A UCSC Txn Factor no Conserved 107880714
chr1 234741562 234749622 POLR2A UCSC Txn Factor no Conserved 107880715
chr1 234747946 234748654 TBL1XR1 UCSC Txn Factor no Conserved 107881051
chr1 234748065 234748702 TCF7L2 UCSC Txn Factor no Conserved 107881058
chr1 234748135 234749035 KAP1 UCSC Txn Factor no Conserved 107881065
chr1 234748163 234748844 NFIC UCSC Txn Factor no Conserved 107881069
chr1 234748190 234748841 EP300 UCSC Txn Factor no Conserved 107881072
chr1 234748223 234748842 TCF12 UCSC Txn Factor no Conserved 107881078
chr1 234748248 234748561 FOXA1 UCSC Txn Factor no Conserved 107881088
chr1 234748260 234748729 MYC UCSC Txn Factor no Conserved 107881095
chr1 234748265 234748537 FOXA2 UCSC Txn Factor no Conserved 107881098
chr1 234748274 234748972 E2F1 UCSC Txn Factor no Conserved 107881103
chr1 234748287 234748886 RCOR1 UCSC Txn Factor no Conserved 107881106
chr1 234748288 234748714 JUND UCSC Txn Factor no Conserved 107881107
chr1 234748297 234748813 CEBPB UCSC Txn Factor no Conserved 107881111
chr1 234748321 234748538 EGR1 UCSC Txn Factor no Conserved 107881128
chr1 234748345 234748683 BHLHE40 UCSC Txn Factor no Conserved 107881146
chr1 234748353 234748700 FOSL2 UCSC Txn Factor no Conserved 107881156
chr1 234748370 234748624 TEAD4 UCSC Txn Factor no Conserved 107881167
chr1 234748392 234748797 FOS UCSC Txn Factor no Conserved 107881183
chr1 234748395 234748705 ZNF263 UCSC Txn Factor no Conserved 107881189
chr1 234748428 234748727 USF2 UCSC Txn Factor no Conserved 107881208
chr1 234748429 234748732 BCL3 UCSC Txn Factor no Conserved 107881209
chr1 234748456 234748775 EBF1 UCSC Txn Factor no Conserved 107881225
chr1 234748479 234748721 SPI1 UCSC Txn Factor no Conserved 107881234
chr1 234748487 234748672 USF1 UCSC Txn Factor no Conserved 107881238
chr1 234748893 234749249 RCOR1 UCSC Txn Factor no Conserved 107881276
chr1 234748920 234749101 SPI1 UCSC Txn Factor no Conserved 107881279
chr1 234748144 234748154 GABPA JASPAR yes 118483872
chr1 234748145 234748150 ETS2 TRANSFAC yes 118483873
chr1 234748146 234748164 NR3C1 JASPAR yes 118483874
chr1 234748154 234748158 YY1 TRANSFAC yes 118483875
chr1 234748155 234748163 FEV JASPAR yes 118483876
chr1 234748157 234748162 ETS2 TRANSFAC yes 118483877
chr1 234748165 234748169 YY1 TRANSFAC yes 118483878
chr1 234748205 234748208 MYB TRANSFAC yes 118483879
chr1 234748226 234748247 IRF1 JASPAR yes 118483880
chr1 234748227 234748237 NFATC3 JASPAR yes 118483881
chr1 234748229 234748236 NFATC2 JASPAR yes 118483882
chr1 234748241 234748256 MEF2A JASPAR yes 118483883
chr1 234748242 234748257 MEF2C JASPAR yes 118483884
chr1 234748245 234748249 YY1 TRANSFAC yes 118483885
chr1 234748293 234748302 THAP1 JASPAR yes 118483886
chr1 234748296 234748300 LFA1 TRANSFAC yes 118483887
chr1 234748304 234748320 SRF JASPAR yes 118483888
chr1 234748305 234748310 ETS2 TRANSFAC yes 118483889
chr1 234748307 234748319 SRF JASPAR yes 118483890
chr1 234748313 234748324 DMRT3 JASPAR yes 118483891
chr1 234748340 234748355 LEF1 JASPAR yes 118483892
chr1 234748341 234748355 TCF7L2 JASPAR yes 118483893
chr1 234748367 234748381 ONECUT2 JASPAR yes 118483894
chr1 234748367 234748381 ONECUT3 JASPAR yes 118483895
chr1 234748375 234748387 POU2F1 JASPAR yes 118483896
chr1 234748375 234748388 POU3F3 JASPAR yes 118483897
chr1 234748375 234748389 POU1F1 JASPAR yes 118483898
chr1 234748376 234748388 POU3F1 JASPAR yes 118483899
chr1 234748376 234748388 POU3F2 JASPAR yes 118483900
chr1 234748377 234748386 POU3F4 JASPAR yes 118483901
chr1 234748380 234748388 FOXC1 JASPAR yes 118483902
chr1 234748380 234748394 FOXF2 JASPAR yes 118483903
chr1 234748381 234748392 FOXA1 JASPAR yes 118483904
chr1 234748381 234748396 FOXA1 JASPAR yes 118483905
chr1 234748382 234748389 NKX3-1 JASPAR yes 118483906
chr1 234748382 234748393 FOXB1 JASPAR yes 118483907
chr1 234748382 234748393 FOXC1 JASPAR yes 118483908
chr1 234748382 234748394 FOXC2 JASPAR yes 118483909
chr1 234748383 234748394 FOXP2 JASPAR yes 118483910
chr1 234748385 234748392 FOXD2 JASPAR yes 118483911
chr1 234748385 234748392 FOXI1 JASPAR yes 118483912
chr1 234748385 234748392 FOXL1 JASPAR yes 118483913
chr1 234748385 234748392 FOXO4 JASPAR yes 118483914
chr1 234748385 234748392 FOXO6 JASPAR yes 118483915
chr1 234748385 234748392 FOXP3 JASPAR yes 118483916
chr1 234748385 234748393 FOXD1 JASPAR yes 118483917
chr1 234748385 234748393 FOXG1 JASPAR yes 118483918
chr1 234748385 234748393 FOXO3 JASPAR yes 118483919
chr1 234748386 234748394 FOXL1 JASPAR yes 118483920
chr1 234748395 234748401 LEF1 TRANSFAC yes 118483921
chr1 234748395 234748401 SOX10 JASPAR yes 118483922
chr1 234748395 234748410 FOXP1 JASPAR yes 118483923
chr1 234748403 234748416 SMAD2 JASPAR yes 118483924
chr1 234748406 234748427 ZNF263 JASPAR yes 118483925
chr1 234748410 234748430 RREB1 JASPAR yes 118483926
chr1 234748418 234748429 E2F6 JASPAR yes 118483927
chr1 234748421 234748433 TFAP2A JASPAR yes 118483928
chr1 234748502 234748521 RFX2 JASPAR yes 118483929
chr1 234748512 234748527 JUND JASPAR yes 118483930
chr1 234748513 234748526 JUN JASPAR yes 118483931
chr1 234748514 234748527 ATF4 JASPAR yes 118483932
chr1 234748572 234748582 MLXIPL JASPAR yes 118483933
chr1 234748572 234748582 SREBF2 JASPAR yes 118483934
chr1 234748572 234748582 TFE3 JASPAR yes 118483935
chr1 234748572 234748582 TFEB JASPAR yes 118483936
chr1 234748572 234748582 TFEC JASPAR yes 118483937
chr1 234748572 234748583 USF2 JASPAR yes 118483938
chr1 234748572 234748590 MAFF JASPAR yes 118483939
chr1 234748574 234748589 MAFK JASPAR yes 118483940
chr1 234748579 234748590 NFE2 JASPAR yes 118483941
chr1 234748580 234748589 JDP2 JASPAR yes 118483942
chr1 234748584 234748605 IRF1 JASPAR yes 118483943
chr1 234748587 234748593 TCF4 TRANSFAC yes 118483944
chr1 234748587 234748601 IRF8 JASPAR yes 118483945
chr1 234748588 234748602 SPI1 JASPAR yes 118483946
chr1 234748588 234748602 SPIC JASPAR yes 118483947
chr1 234748589 234748602 ELF1 JASPAR yes 118483948
chr1 234748590 234748602 EHF JASPAR yes 118483949
chr1 234748590 234748602 ELF4 JASPAR yes 118483950
chr1 234748590 234748603 ELF3 JASPAR yes 118483951
chr1 234748591 234748602 ELF5 JASPAR yes 118483952
chr1 234748592 234748599 SPIB JASPAR yes 118483953
chr1 234748592 234748602 ETV6 JASPAR yes 118483954
chr1 234748592 234748603 FLI1 JASPAR yes 118483955
chr1 234748593 234748601 EHF JASPAR yes 118483956
chr1 234748594 234748601 SPI1 JASPAR yes 118483957
chr1 234748618 234748633 HNF4A JASPAR yes 118483958
chr1 234748619 234748633 NR2F1 JASPAR yes 118483959
chr1 234748619 234748634 HNF4G JASPAR yes 118483960
chr1 234748619 234748634 NR2C2 JASPAR yes 118483961
chr1 234748634 234748645 TFAP2A JASPAR yes 118483962
chr1 234748634 234748645 TFAP2B JASPAR yes 118483963
chr1 234748634 234748645 TFAP2C JASPAR yes 118483964
chr1 234748648 234748652 H4TF2 TRANSFAC yes 118483965
chr1 234748691 234748702 ESRRB JASPAR yes 118483966
chr1 234748745 234748758 ZBTB18 JASPAR yes 118483967
chr1 234748752 234748771 REST JASPAR yes 118483968
chr1 234748811 234748824 ATF4 JASPAR yes 118483969
chr1 234748812 234748823 CEBPA JASPAR yes 118483970
chr1 234748813 234748824 CEBPB JASPAR yes 118483971
chr1 234748838 234748843 ETS2 TRANSFAC yes 118483972
chr1 234748838 234748846 FEV JASPAR yes 118483973
chr1 234748870 234748880 SMAD3 JASPAR yes 118483974
chr1 234748913 234748928 FOXP1 JASPAR yes 118483975
chr1 234748915 234748930 FOXP1 JASPAR yes 118483976
SNP sites on vista5620[chr1:234748100-234748931]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 234748123 rs116486007 C G
POLR2A TBL1XR1 TCF7L2
1044058
chr1 234748141 rs78831112 C T
KAP1 POLR2A TBL1XR1 TCF7L2
1044059
chr1 234748156 rs560484775 A T
FEV KAP1 NR3C1 POLR2A TBL1XR1 TCF7L2 YY1
1044060
chr1 234748202 rs79315632 G A
EP300 KAP1 NFIC POLR2A TBL1XR1 TCF7L2
1044061
chr1 234748342 rs190305745 G A
CEBPB E2F1 EGR1 EP300 FOXA1 FOXA2 JUND KAP1 LEF1 MYC NFIC POLR2A RCOR1 TBL1XR1 TCF12 TCF7L2
1044062
chr1 234748351 rs116033053 T C
BHLHE40 CEBPB E2F1 EGR1 EP300 FOXA1 FOXA2 JUND KAP1 LEF1 MYC NFIC POLR2A RCOR1 TBL1XR1 TCF12 TCF7L2
1044063
chr1 234748487 rs533237362 T G
BCL3 BHLHE40 CEBPB E2F1 EBF1 EGR1 EP300 FOS FOSL2 FOXA1 FOXA2 JUND KAP1 MYC NFIC POLR2A RCOR1 SPI1 TBL1XR1 TCF12 TCF7L2 TEAD4 USF1 USF2 ZNF263
1044064
chr1 234748657 rs532703967 C CA
BCL3 BHLHE40 CEBPB E2F1 EBF1 EP300 FOS FOSL2 JUND KAP1 MYC NFIC POLR2A RCOR1 SPI1 TCF12 TCF7L2 USF1 USF2 ZNF263
1044065
chr1 234748705 rs11806194 G C
BCL3 CEBPB E2F1 EBF1 EP300 FOS JUND KAP1 MYC NFIC POLR2A RCOR1 SPI1 TCF12 USF2 ZNF263
1044066
chr1 234748929 rs549890724 T A
E2F1 FOXP1 KAP1 POLR2A RCOR1 SPI1
1044067
Genes possibly regulated by vista5620[chr1:234748100-234748931]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 234740015 234745271 - IRF2BP2 ENSG00000168264.6 234745271 0.68 1.0 1964 97171
Expression level of Genes
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miRNAs possibly regulated by vista5620[chr1:234748100-234748931]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results